Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:32 (1508115): wrapper (7.7.26015): starting
08:23:32 (1508115): wrapper: running run_atlas (--nthreads 2)
[2026-03-08 08:23:32] Arguments: --nthreads 2
[2026-03-08 08:23:32] Threads: 2
[2026-03-08 08:23:32] Checking for CVMFS
[2026-03-08 08:23:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 08:23:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 08:23:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 08:23:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 08:23:33] 2.9.2.0 17083 15287 62112 157032 3 49 34528769 36864000 0 130560 0 4374589 99.976 578521 12715 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 08:23:33] CVMFS is ok
[2026-03-08 08:23:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 08:23:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 08:23:33] Further information can be found at the LHC@home message board.
[2026-03-08 08:23:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 08:23:33] Checking for apptainer binary...
[2026-03-08 08:23:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 08:23:33] Running /usr/bin/apptainer --version
[2026-03-08 08:23:33] apptainer version 1.4.1-1.1
[2026-03-08 08:23:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 08:23:33] magicA244
[2026-03-08 08:23:33] apptainer works
[2026-03-08 08:23:33] Set ATHENA_PROC_NUMBER=2
[2026-03-08 08:23:33] Set ATHENA_CORE_NUMBER=2
[2026-03-08 08:23:33] Starting ATLAS job with PandaID=7045289684
[2026-03-08 08:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 10:52:30]  *** The last 200 lines of the pilot log: ***
[2026-03-08 10:52:30] 2026-03-08 09:51:59,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 10:52:30] 2026-03-08 09:51:59,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:52:30] 2026-03-08 09:51:59,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 10:52:30] 2026-03-08 09:51:59,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:52:30] 2026-03-08 09:51:59,318 | INFO     | aborting loop
[2026-03-08 10:52:30] 2026-03-08 09:51:59,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 10:52:30] 2026-03-08 09:51:59,758 | INFO     | all data control threads have been joined
[2026-03-08 10:52:30] 2026-03-08 09:51:59,798 | INFO     | all payload control threads have been joined
[2026-03-08 10:52:30] 2026-03-08 09:52:00,319 | INFO     | [job] job monitor thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:00,323 | INFO     | [job] queue monitor thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:00,324 | INFO     | [job] retrieve thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:00,333 | INFO     | all job control threads have been joined
[2026-03-08 10:52:30] 2026-03-08 09:52:00,763 | INFO     | [data] control thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:00,777 | INFO     | [payload] failed_post thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:00,804 | INFO     | [payload] control thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,299 | INFO     | [job] validate thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,339 | INFO     | [job] control thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,344 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,371 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,523 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,553 | INFO     | [data] copytool_out thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,714 | INFO     | [data] copytool_in thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:01,875 | INFO     | [payload] validate_post thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:03,325 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 10:52:30] 2026-03-08 09:52:07,453 | INFO     | [monitor] cgroup control has ended
[2026-03-08 10:52:30] 2026-03-08 09:52:09,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668259510080)>', '<ExcThread(monitor, started 139667588486912)>']
[2026-03-08 10:52:30] 2026-03-08 09:52:14,423 | INFO     | all workflow threads have been joined
[2026-03-08 10:52:30] 2026-03-08 09:52:14,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 10:52:30] 2026-03-08 09:52:14,424 | INFO     | traces error code: 0
[2026-03-08 10:52:30] 2026-03-08 09:52:14,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 10:52:30] 2026-03-08 09:52:30,148 | INFO     | PID=1512140 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 10:52:30] 2026-03-08 09:52:30,148 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 10:52:30] 2026-03-08 09:52:30,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 10:52:30] 2026-03-08 09:52:30,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 10:52:30] 2026-03-08 09:52:30,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 10:52:30] 2026-03-08 09:52:30,149 | INFO     | [monitor] control thread has ended
[2026-03-08 10:52:30] 2026-03-08 09:52:30,188 [wrapper] ==== pilot stdout END ====
[2026-03-08 10:52:30] 2026-03-08 09:52:30,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 10:52:30] 2026-03-08 09:52:30,193 [wrapper] pilotpid: 1512140
[2026-03-08 10:52:30] 2026-03-08 09:52:30,195 [wrapper] Pilot exit status: 0
[2026-03-08 10:52:30] 2026-03-08 09:52:30,202 [wrapper] pandaids: 7045289684
[2026-03-08 10:52:30] 2026-03-08 09:52:30,213 [wrapper] cleanup supervisor_pilot 1521905 1512141
[2026-03-08 10:52:30] 2026-03-08 09:52:30,216 [wrapper] Test setup, not cleaning
[2026-03-08 10:52:30] 2026-03-08 09:52:30,218 [wrapper] apfmon messages muted
[2026-03-08 10:52:30] 2026-03-08 09:52:30,220 [wrapper] ==== wrapper stdout END ====
[2026-03-08 10:52:30] 2026-03-08 09:52:30,222 [wrapper] ==== wrapper stderr END ====
[2026-03-08 10:52:30]  *** Error codes and diagnostics ***
[2026-03-08 10:52:30]     "exeErrorCode": 0,
[2026-03-08 10:52:30]     "exeErrorDiag": "",
[2026-03-08 10:52:30]     "pilotErrorCode": 0,
[2026-03-08 10:52:30]     "pilotErrorDiag": "",
[2026-03-08 10:52:30]  *** Listing of results directory ***
[2026-03-08 10:52:30] total 400268
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc    584627 Mar  7 18:36 pilot3.tar.gz
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      5111 Mar  7 18:37 queuedata.json
[2026-03-08 10:52:30] -rwx------ 1 boinc boinc     36322 Mar  7 18:39 runpilot2-wrapper.sh
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc       100 Mar  8 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 10:52:30] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 08:23 run_atlas
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc       105 Mar  8 08:23 job.xml
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc 209345658 Mar  8 08:23 EVNT.48966985._000576.pool.root.1
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc    597968 Mar  8 08:23 input.tar.gz
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc     15845 Mar  8 08:23 start_atlas.sh
[2026-03-08 10:52:30] drwxrwx--x 2 boinc boinc      4096 Mar  8 08:23 shared
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc         0 Mar  8 08:23 boinc_setup_complete
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      6208 Mar  8 08:23 init_data.xml
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc         0 Mar  8 08:23 boinc_lockfile
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      2592 Mar  8 08:23 pandaJob.out
[2026-03-08 10:52:30] -rw------- 1 boinc boinc    999169 Mar  8 08:23 agis_schedconf.cvmfs.json
[2026-03-08 10:52:30] -rw------- 1 boinc boinc   1521291 Mar  8 08:23 agis_ddmendpoints.agis.ALL.json
[2026-03-08 10:52:30] -rw------- 1 boinc boinc       420 Mar  8 08:23 workernode_map.json
[2026-03-08 10:52:30] drwx------ 5 boinc boinc      4096 Mar  8 08:23 pilot3
[2026-03-08 10:52:30] -rw------- 1 boinc boinc        95 Mar  8 10:51 pilot_heartbeat.json
[2026-03-08 10:52:30] -rw------- 1 boinc boinc 193510322 Mar  8 10:51 HITS.48966988._014682.pool.root.1
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc       529 Mar  8 10:51 boinc_task_state.xml
[2026-03-08 10:52:30] -rw------- 1 boinc boinc      1015 Mar  8 10:51 memory_monitor_summary.json
[2026-03-08 10:52:30] -rw------- 1 boinc boinc    287915 Mar  8 10:51 log.48966988._014682.job.log.tgz.1
[2026-03-08 10:52:30] -rw------- 1 boinc boinc      6304 Mar  8 10:51 heartbeat.json
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc        27 Mar  8 10:52 wrapper_checkpoint.txt
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      8192 Mar  8 10:52 boinc_mmap_file
[2026-03-08 10:52:30] -rw------- 1 boinc boinc       747 Mar  8 10:52 pilotlog.txt
[2026-03-08 10:52:30] -rw------- 1 boinc boinc   1265001 Mar  8 10:52 log.48966988._014682.job.log.1
[2026-03-08 10:52:30] -rw------- 1 boinc boinc       357 Mar  8 10:52 output.list
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc       620 Mar  8 10:52 runtime_log
[2026-03-08 10:52:30] -rw------- 1 boinc boinc   1566720 Mar  8 10:52 result.tar.gz
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      8911 Mar  8 10:52 runtime_log.err
[2026-03-08 10:52:30] -rw------- 1 boinc boinc       660 Mar  8 10:52 1PyNDmKnAJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyHULDmalSAZm.diag
[2026-03-08 10:52:30] -rw-r--r-- 1 boinc boinc      7339 Mar  8 10:52 stderr.txt
[2026-03-08 10:52:30] HITS file was successfully produced:
[2026-03-08 10:52:30] -rw------- 1 boinc boinc 193510322 Mar  8 10:51 shared/HITS.pool.root.1
[2026-03-08 10:52:30]  *** Contents of shared directory: ***
[2026-03-08 10:52:30] total 395556
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc 209345658 Mar  8 08:23 ATLAS.root_0
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc    597968 Mar  8 08:23 input.tar.gz
[2026-03-08 10:52:30] -rw-r--r-- 2 boinc boinc     15845 Mar  8 08:23 start_atlas.sh
[2026-03-08 10:52:30] -rw------- 1 boinc boinc 193510322 Mar  8 10:51 HITS.pool.root.1
[2026-03-08 10:52:30] -rw------- 1 boinc boinc   1566720 Mar  8 10:52 result.tar.gz
10:52:31 (1508115): run_atlas exited; CPU time 17352.490140
10:52:31 (1508115): called boinc_finish(0)

</stderr_txt>
]]>

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