Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:23:07 (2006873): wrapper (7.7.26015): starting
17:23:07 (2006873): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:23:07] Arguments: --nthreads 4
[2026-03-07 17:23:07] Threads: 4
[2026-03-07 17:23:07] Checking for CVMFS
[2026-03-07 17:23:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 17:23:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 17:23:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 17:23:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 17:23:10] 2.13.3.0 21737 7305 51368 157016 0 11 8688927 102400001 2748 130560 15 5100344 99.989 253777 67 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 17:23:10] CVMFS is ok
[2026-03-07 17:23:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:23:10] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 17:23:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 17:23:10] Further information can be found at the LHC@home message board.
[2026-03-07 17:23:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:23:10] Checking for apptainer binary...
[2026-03-07 17:23:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 17:23:10] Running /usr/bin/apptainer --version
[2026-03-07 17:23:10] apptainer version 1.4.5
[2026-03-07 17:23:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:23:10] T7810-Ubuntu
[2026-03-07 17:23:10] apptainer works
[2026-03-07 17:23:10] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:23:10] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:23:10] Starting ATLAS job with PandaID=7039178618
[2026-03-07 17:23:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 20:26:55]  *** The last 200 lines of the pilot log: ***
[2026-03-07 20:26:55] 2026-03-08 01:25:49,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,150 | INFO     | time since job start (10938s) is within the limit (349056.0s)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,979 | INFO     | job 7039178618 has state=finished
[2026-03-07 20:26:55] 2026-03-08 01:25:50,979 | INFO     | preparing for final server update for job 7039178618 in state='finished'
[2026-03-07 20:26:55] 2026-03-08 01:25:50,980 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7039178618/jobReport.json
[2026-03-07 20:26:55] 2026-03-08 01:25:50,982 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/5/workernode_map.json
[2026-03-07 20:26:55] 2026-03-08 01:25:50,982 | INFO     | this job has now completed (state=finished)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,983 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,983 | INFO     | log transfer has been attempted: DONE
[2026-03-07 20:26:55] 2026-03-08 01:25:50,983 | INFO     | job 7039178618 has finished - writing final server update
[2026-03-07 20:26:55] 2026-03-08 01:25:50,983 | INFO     | total number of processed events: 400 (read)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,997 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7039178618/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 20:26:55] 2026-03-08 01:25:50,997 | INFO     | extracted standard info from prmon json
[2026-03-07 20:26:55] 2026-03-08 01:25:50,998 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 20:26:55] 2026-03-08 01:25:50,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 20:26:55] 2026-03-08 01:25:50,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 20:26:55] 2026-03-08 01:25:50,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 20:26:55] 2026-03-08 01:25:51,002 | INFO     | fitting pss+swap vs Time
[2026-03-07 20:26:55] 2026-03-08 01:25:51,002 | INFO     | sum of square deviations: 1778377530.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,003 | INFO     | sum of deviations: -20839814910.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,003 | INFO     | mean x: 1772927663.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,003 | INFO     | mean y: 2345691.324022346
[2026-03-07 20:26:55] 2026-03-08 01:25:51,004 | INFO     | intersect: 20778296648.00242
[2026-03-07 20:26:55] 2026-03-08 01:25:51,004 | INFO     | chi2: 1.6305701645621482
[2026-03-07 20:26:55] 2026-03-08 01:25:51,004 | INFO     | sum of square deviations: 1633472487.5
[2026-03-07 20:26:55] 2026-03-08 01:25:51,005 | INFO     | sum of deviations: -20066680810.500004
[2026-03-07 20:26:55] 2026-03-08 01:25:51,005 | INFO     | mean x: 1772927510.5
[2026-03-07 20:26:55] 2026-03-08 01:25:51,006 | INFO     | mean y: 2346505.1896551726
[2026-03-07 20:26:55] 2026-03-08 01:25:51,006 | INFO     | intersect: 21782187136.486416
[2026-03-07 20:26:55] 2026-03-08 01:25:51,006 | INFO     | chi2: 1.6268931779528961
[2026-03-07 20:26:55] 2026-03-08 01:25:51,006 | INFO     | current chi2=1.6268931779528961 (change=0.22550312088161234 %)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,006 | INFO     | right removable region: 173
[2026-03-07 20:26:55] 2026-03-08 01:25:51,007 | INFO     | sum of square deviations: 1633472487.5
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | sum of deviations: -40504710954.99999
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | mean x: 1772927815.5
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | mean y: 2365996.8505747127
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | intersect: 43965107494.14626
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | chi2: 0.2988892489445396
[2026-03-07 20:26:55] 2026-03-08 01:25:51,008 | INFO     | current chi2=0.2988892489445396 (change=81.66964811202716 %)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,009 | INFO     | sum of square deviations: 1496660620.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | sum of deviations: -32931216610.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | mean x: 1772927968.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | mean y: 2357531.99408284
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | intersect: 39012320223.55948
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | chi2: 0.2749346542490033
[2026-03-07 20:26:55] 2026-03-08 01:25:51,010 | INFO     | current chi2=0.2749346542490033 (change=8.01453875645463 %)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,011 | INFO     | left removable region: 20
[2026-03-07 20:26:55] 2026-03-08 01:25:51,011 | INFO     | sum of square deviations: 1110539892.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | sum of deviations: -13975192353.999998
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | mean x: 1772928090.0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | mean y: 2335691.8039215687
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | intersect: 22313115580.078136
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | chi2: 0.14167000023805706
[2026-03-07 20:26:55] 2026-03-08 01:25:51,012 | INFO     | current memory leak: -12.58 B/s (using 153 data points, chi2=0.14)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,013 | INFO     | could have reported an average CPU frequency of 2719 MHz (10 samples)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,013 | INFO     | ..............................
[2026-03-07 20:26:55] 2026-03-08 01:25:51,013 | INFO     | . Timing measurements:
[2026-03-07 20:26:55] 2026-03-08 01:25:51,013 | INFO     | . get job = 0 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,013 | INFO     | . initial setup = 9 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | . payload setup = 6 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | . stage-in = 0 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | . payload execution = 10908 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | . stage-out = 2 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | . log creation = 0 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,014 | INFO     | ..............................
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | 
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | job summary report
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | --------------------------------------------------
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | PanDA job id: 7039178618
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | task id: 48955006
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | errors: (none)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | pilot state: finished 
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | transexitcode: 0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | exeerrorcode: 0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | exeerrordiag: 
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | exitcode: 0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,089 | INFO     | exitmsg: OK
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | cpuconsumptiontime: 42360 s
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | nevents: 400
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | neventsw: 0
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | pid: 2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | pgrp: 2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | corecount: 4
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | event service: False
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | sizes: {0: 2295384, 1: 2295845, 12: 2295845, 10918: 2325034, 10922: 2334060, 10925: 2334116, 10927: 2334438}
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | --------------------------------------------------
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | 
[2026-03-07 20:26:55] 2026-03-08 01:25:51,090 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-07 20:26:55] 2026-03-08 01:25:51,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 20:26:55] 2026-03-08 01:25:51,114 | INFO     | job 7039178618 has completed (purged errors)
[2026-03-07 20:26:55] 2026-03-08 01:25:51,114 | INFO     | overall cleanup function is called
[2026-03-07 20:26:55] 2026-03-08 01:25:52,122 | INFO     | --- collectZombieJob: --- 10, [2016002]
[2026-03-07 20:26:55] 2026-03-08 01:25:52,122 | INFO     | zombie collector waiting for pid 2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:52,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 20:26:55] 2026-03-08 01:25:52,122 | INFO     | collected zombie processes
[2026-03-07 20:26:55] 2026-03-08 01:25:52,123 | INFO     | will attempt to kill all subprocesses of pid=2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:52,527 | INFO     | process IDs to be killed: [2016002] (in reverse order)
[2026-03-07 20:26:55] 2026-03-08 01:25:52,619 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 20:26:55] 2026-03-08 01:25:52,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 20:26:55] 2026-03-08 01:25:52,629 | INFO     | did not find any defunct processes belonging to 2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:52,638 | INFO     | did not find any defunct processes belonging to 2016002
[2026-03-07 20:26:55] 2026-03-08 01:25:52,638 | INFO     | ready for new job
[2026-03-07 20:26:55] 2026-03-08 01:25:52,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 20:26:55] 2026-03-08 01:25:52,640 | INFO     | **************************************
[2026-03-07 20:26:55] 2026-03-08 01:25:52,640 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 20:26:55] 2026-03-08 01:25:52,641 | INFO     | **************************************
[2026-03-07 20:26:55] 2026-03-08 01:25:52,641 | INFO     | 
[2026-03-07 20:26:55] 2026-03-08 01:25:52,645 | INFO     | architecture information:
[2026-03-07 20:26:55] 2026-03-08 01:25:52,646 | INFO     | executing command: cat /etc/os-release
[2026-03-07 20:26:55] 2026-03-08 01:25:52,660 | INFO     | cat /etc/os-release:
[2026-03-07 20:26:55] NAME="CentOS Linux"
[2026-03-07 20:26:55] VERSION="7 (Core)"
[2026-03-07 20:26:55] ID="centos"
[2026-03-07 20:26:55] ID_LIKE="rhel fedora"
[2026-03-07 20:26:55] VERSION_ID="7"
[2026-03-07 20:26:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 20:26:55] ANSI_COLOR="0;31"
[2026-03-07 20:26:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 20:26:55] HOME_URL="https://www.centos.org/"
[2026-03-07 20:26:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 20:26:55] 
[2026-03-07 20:26:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 20:26:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 20:26:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 20:26:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 20:26:55] 
[2026-03-07 20:26:55] 2026-03-08 01:25:52,661 | INFO     | **************************************
[2026-03-07 20:26:55] 2026-03-08 01:25:53,163 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-07 20:26:55] 2026-03-08 01:25:53,180 | INFO     | sufficient remaining disk space (399838806016 B)
[2026-03-07 20:26:55] 2026-03-08 01:25:53,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 20:26:55] 2026-03-08 01:25:53,181 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 20:26:55] 2026-03-08 01:25:53,181 | INFO     | update_server=False
[2026-03-07 20:26:55] 2026-03-08 01:25:53,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 20:26:55] 2026-03-08 01:25:53,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 20:26:55] 2026-03-08 01:25:53,181 | INFO     | aborting loop
[2026-03-07 20:26:55] 2026-03-08 01:25:53,601 | INFO     | all data control threads have been joined
[2026-03-07 20:26:55] 2026-03-08 01:25:53,737 | INFO     | all job control threads have been joined
[2026-03-07 20:26:55] 2026-03-08 01:25:54,184 | INFO     | [data] copytool_in thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,186 | INFO     | [job] retrieve thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,186 | INFO     | [job] job monitor thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 20:26:55] 2026-03-08 01:25:54,518 | INFO     | all payload control threads have been joined
[2026-03-07 20:26:55] 2026-03-08 01:25:54,606 | INFO     | [data] control thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,689 | INFO     | [payload] validate_post thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,742 | INFO     | [job] control thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,922 | INFO     | [job] validate thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:54,953 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:55,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 20:26:55] 2026-03-08 01:25:55,239 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:55,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:55,525 | INFO     | [payload] control thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:55,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:55,702 | INFO     | [payload] failed_post thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:56,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 20:26:55] 2026-03-08 01:25:56,439 | INFO     | [data] copytool_out thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:57,105 | INFO     | [job] queue monitor thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:25:59,113 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 20:26:55] 2026-03-08 01:26:23,651 | INFO     | PID=2011235 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 20:26:55] 2026-03-08 01:26:23,652 | INFO     | .. there are 4 such processes running
[2026-03-07 20:26:55] 2026-03-08 01:26:23,653 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 20:26:55] 2026-03-08 01:26:23,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 20:26:55] 2026-03-08 01:26:23,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 20:26:55] 2026-03-08 01:26:49,062 | INFO     | [monitor] cgroup control has ended
[2026-03-07 20:26:55] 2026-03-08 01:26:50,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135279752812352)>', '<ExcThread(monitor, started 135279105005312)>']
[2026-03-07 20:26:55] 2026-03-08 01:26:50,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 20:26:55] 2026-03-08 01:26:50,791 | INFO     | [monitor] control thread has ended
[2026-03-07 20:26:55] 2026-03-08 01:26:55,671 | INFO     | all workflow threads have been joined
[2026-03-07 20:26:55] 2026-03-08 01:26:55,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 20:26:55] 2026-03-08 01:26:55,672 | INFO     | traces error code: 0
[2026-03-07 20:26:55] 2026-03-08 01:26:55,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 20:26:55] 2026-03-08 01:26:55,789 [wrapper] ==== pilot stdout END ====
[2026-03-07 20:26:55] 2026-03-08 01:26:55,792 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 20:26:55] 2026-03-08 01:26:55,794 [wrapper] pilotpid: 2011235
[2026-03-07 20:26:55] 2026-03-08 01:26:55,799 [wrapper] Pilot exit status: 0
[2026-03-07 20:26:55] 2026-03-08 01:26:55,810 [wrapper] pandaids: 7039178618
[2026-03-07 20:26:55] 2026-03-08 01:26:55,872 [wrapper] cleanup supervisor_pilot 2068956 2011236
[2026-03-07 20:26:55] 2026-03-08 01:26:55,874 [wrapper] Test setup, not cleaning
[2026-03-07 20:26:55] 2026-03-08 01:26:55,876 [wrapper] apfmon messages muted
[2026-03-07 20:26:55] 2026-03-08 01:26:55,880 [wrapper] ==== wrapper stdout END ====
[2026-03-07 20:26:55] 2026-03-08 01:26:55,882 [wrapper] ==== wrapper stderr END ====
[2026-03-07 20:26:55]  *** Error codes and diagnostics ***
[2026-03-07 20:26:55]     "exeErrorCode": 0,
[2026-03-07 20:26:55]     "exeErrorDiag": "",
[2026-03-07 20:26:55]     "pilotErrorCode": 0,
[2026-03-07 20:26:55]     "pilotErrorDiag": "",
[2026-03-07 20:26:55]  *** Listing of results directory ***
[2026-03-07 20:26:55] total 617436
[2026-03-07 20:26:55] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 12:04 pilot3.tar.gz
[2026-03-07 20:26:55] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 12:08 runpilot2-wrapper.sh
[2026-03-07 20:26:55] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 12:08 queuedata.json
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 20:26:55] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 17:23 run_atlas
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 17:23 job.xml
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd 437327966 Mar  7 17:23 EVNT.46701403._000371.pool.root.1
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:23 start_atlas.sh
[2026-03-07 20:26:55] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 17:23 shared
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd    597958 Mar  7 17:23 input.tar.gz
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd      9126 Mar  7 17:23 init_data.xml
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:23 boinc_setup_complete
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 17:23 boinc_lockfile
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  7 17:23 pandaJob.out
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd    999169 Mar  7 17:23 agis_schedconf.cvmfs.json
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd       434 Mar  7 17:23 workernode_map.json
[2026-03-07 20:26:55] drwx------ 5 whitlerd whitlerd      4096 Mar  7 17:23 pilot3
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd 187112355 Mar  7 20:25 HITS.48955006._018527.pool.root.1
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  7 20:25 boinc_task_state.xml
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd      1043 Mar  7 20:25 memory_monitor_summary.json
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 20:25 agis_ddmendpoints.agis.ALL.json
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd    371035 Mar  7 20:25 log.48955006._018527.job.log.tgz.1
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd      6350 Mar  7 20:25 heartbeat.json
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd        95 Mar  7 20:26 pilot_heartbeat.json
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 20:26 boinc_mmap_file
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  7 20:26 wrapper_checkpoint.txt
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd      4834 Mar  7 20:26 pilotlog.txt
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd   1564623 Mar  7 20:26 log.48955006._018527.job.log.1
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd       357 Mar  7 20:26 output.list
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 20:26 runtime_log
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd   1955840 Mar  7 20:26 result.tar.gz
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd      9020 Mar  7 20:26 runtime_log.err
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd       650 Mar  7 20:26 9iJODmQJAJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfZWLDmBPgDjn.diag
[2026-03-07 20:26:55] -rw-rw-r-- 1 whitlerd whitlerd     21418 Mar  7 20:26 stderr.txt
[2026-03-07 20:26:55] HITS file was successfully produced:
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd 187112355 Mar  7 20:25 shared/HITS.pool.root.1
[2026-03-07 20:26:55]  *** Contents of shared directory: ***
[2026-03-07 20:26:55] total 612328
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd 437327966 Mar  7 17:23 ATLAS.root_0
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 17:23 start_atlas.sh
[2026-03-07 20:26:55] -rw-r--r-- 2 whitlerd whitlerd    597958 Mar  7 17:23 input.tar.gz
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd 187112355 Mar  7 20:25 HITS.pool.root.1
[2026-03-07 20:26:55] -rw------- 1 whitlerd whitlerd   1955840 Mar  7 20:26 result.tar.gz
20:26:57 (2006873): run_atlas exited; CPU time 42804.814202
20:26:57 (2006873): called boinc_finish(0)

</stderr_txt>
]]>

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