Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:22:12 (1530682): wrapper (7.7.26015): starting
19:22:12 (1530682): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 19:22:12] Arguments: --nthreads 4
[2026-03-08 19:22:12] Threads: 4
[2026-03-08 19:22:12] Checking for CVMFS
[2026-03-08 19:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 19:22:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 19:22:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 19:22:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 19:22:13] 2.9.2.0 1496017 153 55424 157049 3 50 31308961 36864001 0 130560 0 74461 99.975 8151 32866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 19:22:13] CVMFS is ok
[2026-03-08 19:22:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 19:22:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 19:22:13] Further information can be found at the LHC@home message board.
[2026-03-08 19:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 19:22:13] Checking for apptainer binary...
[2026-03-08 19:22:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 19:22:13] Running /usr/bin/apptainer --version
[2026-03-08 19:22:13] apptainer version 1.4.1-1.1
[2026-03-08 19:22:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 19:22:13] thA350
[2026-03-08 19:22:13] apptainer works
[2026-03-08 19:22:13] Set ATHENA_PROC_NUMBER=4
[2026-03-08 19:22:13] Set ATHENA_CORE_NUMBER=4
[2026-03-08 19:22:13] Starting ATLAS job with PandaID=7039062969
[2026-03-08 19:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 20:26:34]  *** The last 200 lines of the pilot log: ***
[2026-03-08 20:26:34]  scope=mc23_13p6TeV
[2026-03-08 20:26:34]  status=None
[2026-03-08 20:26:34]  status_code=0
[2026-03-08 20:26:34]  storage_token=
[2026-03-08 20:26:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7039062969/log.48955006._015946.job.log.tgz.1
[2026-03-08 20:26:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/ca/log.48955006._015946.job.log.tgz.1
[2026-03-08 20:26:34]  workdir=None
[2026-03-08 20:26:34] ]
[2026-03-08 20:26:34] 2026-03-08 19:25:34,272 | INFO     | transferring file log.48955006._015946.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7039062969/log.48955006._015946.job.log.tgz.1 to /local/data/boinc/
[2026-03-08 20:26:34] 2026-03-08 19:25:34,272 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7039062969/log.48955006._015946.job.log.tgz.1 /local/data/boinc/slots/0/log.48955006._0159
[2026-03-08 20:26:34] 2026-03-08 19:25:34,286 | INFO     | adding to output.list: log.48955006._015946.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/ca/log.48955006._015946.job.log.tg
[2026-03-08 20:26:34] 2026-03-08 19:25:34,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 20:26:34] 2026-03-08 19:25:34,287 | INFO     | summary of transferred files:
[2026-03-08 20:26:34] 2026-03-08 19:25:34,287 | INFO     |  -- lfn=log.48955006._015946.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 20:26:34] 2026-03-08 19:25:34,287 | INFO     | stage-out finished correctly
[2026-03-08 20:26:34] 2026-03-08 19:25:34,617 | INFO     | time since job start (3790s) is within the limit (349056.0s)
[2026-03-08 20:26:34] 2026-03-08 19:25:36,623 | INFO     | time since job start (3792s) is within the limit (349056.0s)
[2026-03-08 20:26:34] 2026-03-08 19:25:37,474 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 20:26:34] 2026-03-08 19:25:38,629 | INFO     | time since job start (3794s) is within the limit (349056.0s)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,969 | INFO     | job 7039062969 has state=finished
[2026-03-08 20:26:34] 2026-03-08 19:25:38,969 | INFO     | preparing for final server update for job 7039062969 in state='finished'
[2026-03-08 20:26:34] 2026-03-08 19:25:38,969 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7039062969/jobReport.json
[2026-03-08 20:26:34] 2026-03-08 19:25:38,970 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-08 20:26:34] 2026-03-08 19:25:38,971 | INFO     | this job has now completed (state=finished)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,971 | INFO     | log transfer has been attempted: DONE
[2026-03-08 20:26:34] 2026-03-08 19:25:38,971 | INFO     | job 7039062969 has finished - writing final server update
[2026-03-08 20:26:34] 2026-03-08 19:25:38,971 | INFO     | total number of processed events: 400 (read)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,972 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7039062969/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | INFO     | extracted standard info from prmon json
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | INFO     | fitting pss+swap vs Time
[2026-03-08 20:26:34] 2026-03-08 19:25:38,973 | INFO     | sum of square deviations: 51573060.0
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | sum of deviations: -7590069387.0
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | mean x: 1772996113.0
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | mean y: 2661526.309090909
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | intersect: 260936635980.2448
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | chi2: 0.10480705224378241
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | current memory leak: -147.17 B/s (using 55 data points, chi2=0.10)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | could have reported an average CPU frequency of 3809 MHz (6 samples)
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | ..............................
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . Timing measurements:
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . get job = 0 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . initial setup = 3 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . payload setup = 3 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . stage-in = 0 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . payload execution = 3772 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . stage-out = 0 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | . log creation = 0 s
[2026-03-08 20:26:34] 2026-03-08 19:25:38,974 | INFO     | ..............................
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | 
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | job summary report
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | --------------------------------------------------
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | PanDA job id: 7039062969
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | task id: 48955006
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | errors: (none)
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | pilot state: finished 
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | transexitcode: 0
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | exeerrorcode: 0
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | exeerrordiag: 
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | exitcode: 0
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | exitmsg: OK
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | cpuconsumptiontime: 14148 s
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | nevents: 400
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | neventsw: 0
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | pid: 1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | pgrp: 1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | corecount: 4
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | event service: False
[2026-03-08 20:26:34] 2026-03-08 19:25:39,486 | INFO     | sizes: {0: 2295319, 1: 2295836, 11: 2295836, 3779: 2321737, 3780: 2330741, 3783: 2330797, 3784: 2331119}
[2026-03-08 20:26:34] 2026-03-08 19:25:39,487 | INFO     | --------------------------------------------------
[2026-03-08 20:26:34] 2026-03-08 19:25:39,487 | INFO     | 
[2026-03-08 20:26:34] 2026-03-08 19:25:39,487 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-08 20:26:34] 2026-03-08 19:25:39,502 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,502 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,502 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | job 7039062969 has completed (purged errors)
[2026-03-08 20:26:34] 2026-03-08 19:25:39,503 | INFO     | overall cleanup function is called
[2026-03-08 20:26:34] 2026-03-08 19:25:40,510 | INFO     | --- collectZombieJob: --- 10, [1539340]
[2026-03-08 20:26:34] 2026-03-08 19:25:40,510 | INFO     | zombie collector waiting for pid 1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:40,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 20:26:34] 2026-03-08 19:25:40,510 | INFO     | collected zombie processes
[2026-03-08 20:26:34] 2026-03-08 19:25:40,511 | INFO     | will attempt to kill all subprocesses of pid=1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:40,638 | INFO     | process IDs to be killed: [1539340] (in reverse order)
[2026-03-08 20:26:34] 2026-03-08 19:25:40,672 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 20:26:34] 2026-03-08 19:25:40,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 20:26:34] 2026-03-08 19:25:40,680 | INFO     | did not find any defunct processes belonging to 1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:40,686 | WARNING  | process 1539340 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 20:26:34] 2026-03-08 19:25:40,688 | INFO     | did not find any defunct processes belonging to 1539340
[2026-03-08 20:26:34] 2026-03-08 19:25:40,688 | INFO     | ready for new job
[2026-03-08 20:26:34] 2026-03-08 19:25:40,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 20:26:34] 2026-03-08 19:25:40,689 | INFO     | **************************************
[2026-03-08 20:26:34] 2026-03-08 19:25:40,689 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 20:26:34] 2026-03-08 19:25:40,689 | INFO     | **************************************
[2026-03-08 20:26:34] 2026-03-08 19:25:40,689 | INFO     | 
[2026-03-08 20:26:34] 2026-03-08 19:25:40,690 | INFO     | architecture information:
[2026-03-08 20:26:34] 2026-03-08 19:25:40,690 | INFO     | executing command: cat /etc/os-release
[2026-03-08 20:26:34] 2026-03-08 19:25:40,700 | INFO     | cat /etc/os-release:
[2026-03-08 20:26:34] NAME="CentOS Linux"
[2026-03-08 20:26:34] VERSION="7 (Core)"
[2026-03-08 20:26:34] ID="centos"
[2026-03-08 20:26:34] ID_LIKE="rhel fedora"
[2026-03-08 20:26:34] VERSION_ID="7"
[2026-03-08 20:26:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 20:26:34] ANSI_COLOR="0;31"
[2026-03-08 20:26:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 20:26:34] HOME_URL="https://www.centos.org/"
[2026-03-08 20:26:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 20:26:34] 
[2026-03-08 20:26:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 20:26:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 20:26:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 20:26:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 20:26:34] 
[2026-03-08 20:26:34] 2026-03-08 19:25:40,701 | INFO     | **************************************
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7039062969/payload.stdout) since it has not been created yet
[2026-03-08 20:26:34] 2026-03-08 19:25:40,746 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-08 20:26:34] 2026-03-08 19:25:40,758 | INFO     | sufficient remaining disk space (369370333184 B)
[2026-03-08 20:26:34] 2026-03-08 19:25:40,758 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 20:26:34] 2026-03-08 19:25:40,758 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7039062969/HITS.48955006._015946.pool.root.1 since it does not exist
[2026-03-08 20:26:34] 2026-03-08 19:25:40,823 | INFO     | number of running child processes to parent process 1539340: 1
[2026-03-08 20:26:34] 2026-03-08 19:25:40,823 | INFO     | maximum number of monitored processes: 6
[2026-03-08 20:26:34] 2026-03-08 19:25:40,823 | INFO     | aborting job monitoring since job object (job id=7039062969) has expired
[2026-03-08 20:26:34] 2026-03-08 19:25:41,203 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-08 20:26:34] 2026-03-08 19:25:41,214 | INFO     | sufficient remaining disk space (369370333184 B)
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | INFO     | update_server=False
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:26:34] 2026-03-08 19:25:41,215 | INFO     | will abort loop
[2026-03-08 20:26:34] 2026-03-08 19:25:41,324 | INFO     | all data control threads have been joined
[2026-03-08 20:26:34] 2026-03-08 19:25:42,220 | INFO     | [job] job monitor thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,221 | INFO     | [job] retrieve thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,284 | INFO     | [data] copytool_in thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,325 | INFO     | [data] control thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 20:26:34] 2026-03-08 19:25:42,335 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,341 | INFO     | all payload control threads have been joined
[2026-03-08 20:26:34] 2026-03-08 19:25:42,347 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:42,783 | INFO     | all job control threads have been joined
[2026-03-08 20:26:34] 2026-03-08 19:25:42,864 | INFO     | [payload] validate_post thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,346 | INFO     | [payload] control thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 20:26:34] 2026-03-08 19:25:43,516 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,526 | INFO     | [job] validate thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,672 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,699 | INFO     | [payload] failed_post thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:43,788 | INFO     | [job] control thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:44,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:26:34] 2026-03-08 19:25:44,333 | INFO     | [data] copytool_out thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:45,014 | INFO     | [job] queue monitor thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:25:47,516 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 20:26:34] 2026-03-08 19:26:11,732 | INFO     | PID=1534800 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 20:26:34] 2026-03-08 19:26:11,732 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 20:26:34] 2026-03-08 19:26:11,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 20:26:34] 2026-03-08 19:26:11,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 20:26:34] 2026-03-08 19:26:27,943 | INFO     | [monitor] cgroup control has ended
[2026-03-08 20:26:34] 2026-03-08 19:26:29,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409077303104)>', '<ExcThread(monitor, started 140408277411584)>']
[2026-03-08 20:26:34] 2026-03-08 19:26:29,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 20:26:34] 2026-03-08 19:26:29,824 | INFO     | [monitor] control thread has ended
[2026-03-08 20:26:34] 2026-03-08 19:26:34,026 | INFO     | all workflow threads have been joined
[2026-03-08 20:26:34] 2026-03-08 19:26:34,026 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 20:26:34] 2026-03-08 19:26:34,027 | INFO     | traces error code: 0
[2026-03-08 20:26:34] 2026-03-08 19:26:34,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 20:26:34] 2026-03-08 19:26:34,079 [wrapper] ==== pilot stdout END ====
[2026-03-08 20:26:34] 2026-03-08 19:26:34,081 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 20:26:34] 2026-03-08 19:26:34,084 [wrapper] pilotpid: 1534800
[2026-03-08 20:26:34] 2026-03-08 19:26:34,086 [wrapper] Pilot exit status: 0
[2026-03-08 20:26:34] 2026-03-08 19:26:34,094 [wrapper] pandaids: 7039062969
[2026-03-08 20:26:34] 2026-03-08 19:26:34,118 [wrapper] cleanup supervisor_pilot 1547564 1534801
[2026-03-08 20:26:34] 2026-03-08 19:26:34,121 [wrapper] Test setup, not cleaning
[2026-03-08 20:26:34] 2026-03-08 19:26:34,123 [wrapper] apfmon messages muted
[2026-03-08 20:26:34] 2026-03-08 19:26:34,126 [wrapper] ==== wrapper stdout END ====
[2026-03-08 20:26:34] 2026-03-08 19:26:34,128 [wrapper] ==== wrapper stderr END ====
[2026-03-08 20:26:34]  *** Error codes and diagnostics ***
[2026-03-08 20:26:34]     "exeErrorCode": 0,
[2026-03-08 20:26:34]     "exeErrorDiag": "",
[2026-03-08 20:26:34]     "pilotErrorCode": 0,
[2026-03-08 20:26:34]     "pilotErrorDiag": "",
[2026-03-08 20:26:34]  *** Listing of results directory ***
[2026-03-08 20:26:34] total 623520
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc    584627 Mar  7 10:08 pilot3.tar.gz
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc      5111 Mar  7 10:40 queuedata.json
[2026-03-08 20:26:34] -rwx------ 1 boinc boinc     36322 Mar  7 10:41 runpilot2-wrapper.sh
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc       100 Mar  8 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 20:26:34] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 19:22 run_atlas
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc       105 Mar  8 19:22 job.xml
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc 441462392 Mar  8 19:22 EVNT.46701403._000319.pool.root.1
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc    597954 Mar  8 19:22 input.tar.gz
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc     15845 Mar  8 19:22 start_atlas.sh
[2026-03-08 20:26:34] drwxrwx--x 2 boinc boinc      4096 Mar  8 19:22 shared
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc         0 Mar  8 19:22 boinc_setup_complete
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc      6445 Mar  8 19:22 init_data.xml
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc         0 Mar  8 19:22 boinc_lockfile
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc      2564 Mar  8 19:22 pandaJob.out
[2026-03-08 20:26:34] -rw------- 1 boinc boinc    999212 Mar  8 19:22 agis_schedconf.cvmfs.json
[2026-03-08 20:26:34] -rw------- 1 boinc boinc   1521291 Mar  8 19:22 agis_ddmendpoints.agis.ALL.json
[2026-03-08 20:26:34] -rw------- 1 boinc boinc       415 Mar  8 19:22 workernode_map.json
[2026-03-08 20:26:34] drwx------ 5 boinc boinc      4096 Mar  8 19:22 pilot3
[2026-03-08 20:26:34] -rw------- 1 boinc boinc 191374102 Mar  8 20:25 HITS.48955006._015946.pool.root.1
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc       530 Mar  8 20:25 boinc_task_state.xml
[2026-03-08 20:26:34] -rw------- 1 boinc boinc      1031 Mar  8 20:25 memory_monitor_summary.json
[2026-03-08 20:26:34] -rw------- 1 boinc boinc    287334 Mar  8 20:25 log.48955006._015946.job.log.tgz.1
[2026-03-08 20:26:34] -rw------- 1 boinc boinc      6296 Mar  8 20:25 heartbeat.json
[2026-03-08 20:26:34] -rw------- 1 boinc boinc        95 Mar  8 20:26 pilot_heartbeat.json
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc      8192 Mar  8 20:26 boinc_mmap_file
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc        27 Mar  8 20:26 wrapper_checkpoint.txt
[2026-03-08 20:26:34] -rw------- 1 boinc boinc      6135 Mar  8 20:26 pilotlog.txt
[2026-03-08 20:26:34] -rw------- 1 boinc boinc    568565 Mar  8 20:26 log.48955006._015946.job.log.1
[2026-03-08 20:26:34] -rw------- 1 boinc boinc       357 Mar  8 20:26 output.list
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc       620 Mar  8 20:26 runtime_log
[2026-03-08 20:26:34] -rw------- 1 boinc boinc    870400 Mar  8 20:26 result.tar.gz
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc      8896 Mar  8 20:26 runtime_log.err
[2026-03-08 20:26:34] -rw------- 1 boinc boinc       657 Mar  8 20:26 0xhLDmIL3I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuPVLDmVW4DVm.diag
[2026-03-08 20:26:34] -rw-r--r-- 1 boinc boinc     22146 Mar  8 20:26 stderr.txt
[2026-03-08 20:26:34] HITS file was successfully produced:
[2026-03-08 20:26:34] -rw------- 1 boinc boinc 191374102 Mar  8 20:25 shared/HITS.pool.root.1
[2026-03-08 20:26:34]  *** Contents of shared directory: ***
[2026-03-08 20:26:34] total 619468
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc 441462392 Mar  8 19:22 ATLAS.root_0
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc    597954 Mar  8 19:22 input.tar.gz
[2026-03-08 20:26:34] -rw-r--r-- 2 boinc boinc     15845 Mar  8 19:22 start_atlas.sh
[2026-03-08 20:26:34] -rw------- 1 boinc boinc 191374102 Mar  8 20:25 HITS.pool.root.1
[2026-03-08 20:26:34] -rw------- 1 boinc boinc    870400 Mar  8 20:26 result.tar.gz
20:26:36 (1530682): run_atlas exited; CPU time 14173.163457
20:26:36 (1530682): called boinc_finish(0)

</stderr_txt>
]]>

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