Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:04:00 (9069): wrapper (7.7.26015): starting
02:04:00 (9069): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 02:04:00] Arguments: --nthreads 8
[2026-03-08 02:04:00] Threads: 8
[2026-03-08 02:04:00] Checking for CVMFS
[2026-03-08 02:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 02:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 02:04:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 02:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 02:04:00] 2.11.0.0 5628 5284 62564 157021 0 188 2858116 4096001 917 130560 0 1148422 99.421 837562 304 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-08 02:04:00] CVMFS is ok
[2026-03-08 02:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 02:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 02:04:00] Further information can be found at the LHC@home message board.
[2026-03-08 02:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 02:04:00] Checking for apptainer binary...
[2026-03-08 02:04:00] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-08 02:04:00] apptainer is not installed, using version from CVMFS
[2026-03-08 02:04:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 02:04:00] WARNING: Environment variable TMPDIR already has value [/tmp/job_11269956/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node364
[2026-03-08 02:04:00] apptainer works
[2026-03-08 02:04:00] Set ATHENA_PROC_NUMBER=8
[2026-03-08 02:04:00] Set ATHENA_CORE_NUMBER=8
[2026-03-08 02:04:00] Starting ATLAS job with PandaID=7039152441
[2026-03-08 02:04:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11269956/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 02:50:36]  *** The last 200 lines of the pilot log: ***
[2026-03-08 02:50:36]  lfn=log.48955006._017637.job.log.tgz.1
[2026-03-08 02:50:36]  mtime=0
[2026-03-08 02:50:36]  protocol_id=None
[2026-03-08 02:50:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 02:50:36]  replicas=None
[2026-03-08 02:50:36]  scope=mc23_13p6TeV
[2026-03-08 02:50:36]  status=None
[2026-03-08 02:50:36]  status_code=0
[2026-03-08 02:50:36]  storage_token=
[2026-03-08 02:50:36]  surl=/tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/log.48955006._017637.job.log.tgz.1
[2026-03-08 02:50:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/93/log.48955006._017637.job.log.tgz.1
[2026-03-08 02:50:36]  workdir=None
[2026-03-08 02:50:36] ]
[2026-03-08 02:50:36] 2026-03-08 01:50:00,942 | INFO     | transferring file log.48955006._017637.job.log.tgz.1 from /tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/log.48955006._017637.job.log.tgz.1 to /tmp/j
[2026-03-08 02:50:36] 2026-03-08 01:50:00,943 | INFO     | executing command: /usr/bin/env mv /tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/log.48955006._017637.job.log.tgz.1 /tmp/job_11269956/atlas/pilot/sl
[2026-03-08 02:50:36] 2026-03-08 01:50:00,950 | INFO     | adding to output.list: log.48955006._017637.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/93/log.48955006._017637.job.log.tg
[2026-03-08 02:50:36] 2026-03-08 01:50:00,950 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 02:50:36] 2026-03-08 01:50:00,950 | INFO     | summary of transferred files:
[2026-03-08 02:50:36] 2026-03-08 01:50:00,950 | INFO     |  -- lfn=log.48955006._017637.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 02:50:36] 2026-03-08 01:50:00,950 | INFO     | stage-out finished correctly
[2026-03-08 02:50:36] 2026-03-08 01:50:00,988 | INFO     | time since job start (2753s) is within the limit (349056.0s)
[2026-03-08 02:50:36] 2026-03-08 01:50:01,902 | WARNING  | process 19747 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 02:50:36] 2026-03-08 01:50:01,903 | INFO     | using path: /tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 02:50:36] 2026-03-08 01:50:01,903 | INFO     | reaping zombies for max 20 seconds
[2026-03-08 02:50:36] 2026-03-08 01:50:01,909 | INFO     | checking for looping job (in state=finished)
[2026-03-08 02:50:36] 2026-03-08 01:50:01,909 | INFO     | using looping job limit: 7200 s
[2026-03-08 02:50:36] 2026-03-08 01:50:02,008 | INFO     | number of running child processes to parent process 19747: 1
[2026-03-08 02:50:36] 2026-03-08 01:50:02,008 | INFO     | maximum number of monitored processes: 6
[2026-03-08 02:50:36] 2026-03-08 01:50:02,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 02:50:36] 2026-03-08 01:50:02,999 | INFO     | time since job start (2755s) is within the limit (349056.0s)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,114 | INFO     | job 7039152441 has state=finished
[2026-03-08 02:50:36] 2026-03-08 01:50:03,114 | INFO     | preparing for final server update for job 7039152441 in state='finished'
[2026-03-08 02:50:36] 2026-03-08 01:50:03,114 | INFO     | reading metadata from: /tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/jobReport.json
[2026-03-08 02:50:36] 2026-03-08 01:50:03,115 | INFO     | added worker_node to metadata from /tmp/job_11269956/atlas/pilot/slots/0/workernode_map.json
[2026-03-08 02:50:36] 2026-03-08 01:50:03,116 | INFO     | this job has now completed (state=finished)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,116 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,116 | INFO     | log transfer has been attempted: DONE
[2026-03-08 02:50:36] 2026-03-08 01:50:03,116 | INFO     | job 7039152441 has finished - writing final server update
[2026-03-08 02:50:36] 2026-03-08 01:50:03,116 | INFO     | total number of processed events: 400 (read)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | INFO     | using path: /tmp/job_11269956/atlas/pilot/slots/0/PanDA_Pilot-7039152441/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | INFO     | extracted standard info from prmon json
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 02:50:36] 2026-03-08 01:50:03,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | fitting pss+swap vs Time
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | sum of square deviations: 17003109.5
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | sum of deviations: -591313778.5
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | mean x: 1772933296.5
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | mean y: 2540637.8157894737
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | intersect: 61659491478.5944
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | chi2: 0.009780140684737136
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | current memory leak: -34.78 B/s (using 38 data points, chi2=0.01)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | could have reported an average CPU frequency of 2487 MHz (5 samples)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | ..............................
[2026-03-08 02:50:36] 2026-03-08 01:50:03,134 | INFO     | . Timing measurements:
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . get job = 0 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . initial setup = 2 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . payload setup = 2 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . stage-in = 0 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . payload execution = 2735 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . stage-out = 0 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | . log creation = 0 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,135 | INFO     | ..............................
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | 
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | job summary report
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | --------------------------------------------------
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | PanDA job id: 7039152441
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | task id: 48955006
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | errors: (none)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | pilot state: finished 
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | transexitcode: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | exeerrorcode: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | exeerrordiag: 
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | exitcode: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | exitmsg: OK
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | cpuconsumptiontime: 19149 s
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | nevents: 400
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | neventsw: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | pid: 19747
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | pgrp: 19747
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | corecount: 8
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | event service: False
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | sizes: {0: 2295331, 1: 2295959, 11: 2295959, 2741: 2321414, 2742: 2321413, 2743: 2330497, 2745: 2330681, 2746: 2330907}
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | --------------------------------------------------
[2026-03-08 02:50:36] 2026-03-08 01:50:03,432 | INFO     | 
[2026-03-08 02:50:36] 2026-03-08 01:50:03,433 | INFO     | executing command: ls -lF /tmp/job_11269956/atlas/pilot/slots/0
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | job 7039152441 has completed (purged errors)
[2026-03-08 02:50:36] 2026-03-08 01:50:03,442 | INFO     | overall cleanup function is called
[2026-03-08 02:50:36] 2026-03-08 01:50:04,448 | INFO     | --- collectZombieJob: --- 10, [19747]
[2026-03-08 02:50:36] 2026-03-08 01:50:04,448 | INFO     | zombie collector waiting for pid 19747
[2026-03-08 02:50:36] 2026-03-08 01:50:04,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 02:50:36] 2026-03-08 01:50:04,448 | INFO     | collected zombie processes
[2026-03-08 02:50:36] 2026-03-08 01:50:04,448 | INFO     | will attempt to kill all subprocesses of pid=19747
[2026-03-08 02:50:36] 2026-03-08 01:50:04,549 | INFO     | process IDs to be killed: [19747] (in reverse order)
[2026-03-08 02:50:36] 2026-03-08 01:50:04,583 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 02:50:36] 2026-03-08 01:50:04,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 02:50:36] 2026-03-08 01:50:04,587 | INFO     | did not find any defunct processes belonging to 19747
[2026-03-08 02:50:36] 2026-03-08 01:50:04,590 | INFO     | did not find any defunct processes belonging to 19747
[2026-03-08 02:50:36] 2026-03-08 01:50:04,590 | INFO     | ready for new job
[2026-03-08 02:50:36] 2026-03-08 01:50:04,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 02:50:36] 2026-03-08 01:50:04,591 | INFO     | **************************************
[2026-03-08 02:50:36] 2026-03-08 01:50:04,591 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 02:50:36] 2026-03-08 01:50:04,591 | INFO     | **************************************
[2026-03-08 02:50:36] 2026-03-08 01:50:04,591 | INFO     | 
[2026-03-08 02:50:36] 2026-03-08 01:50:04,605 | INFO     | architecture information:
[2026-03-08 02:50:36] 2026-03-08 01:50:04,605 | INFO     | executing command: cat /etc/os-release
[2026-03-08 02:50:36] 2026-03-08 01:50:04,611 | INFO     | cat /etc/os-release:
[2026-03-08 02:50:36] NAME="CentOS Linux"
[2026-03-08 02:50:36] VERSION="7 (Core)"
[2026-03-08 02:50:36] ID="centos"
[2026-03-08 02:50:36] ID_LIKE="rhel fedora"
[2026-03-08 02:50:36] VERSION_ID="7"
[2026-03-08 02:50:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 02:50:36] ANSI_COLOR="0;31"
[2026-03-08 02:50:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 02:50:36] HOME_URL="https://www.centos.org/"
[2026-03-08 02:50:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 02:50:36] 
[2026-03-08 02:50:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 02:50:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 02:50:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 02:50:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 02:50:36] 
[2026-03-08 02:50:36] 2026-03-08 01:50:04,612 | INFO     | **************************************
[2026-03-08 02:50:36] 2026-03-08 01:50:05,114 | INFO     | executing command: df -mP /tmp/job_11269956/atlas/pilot/slots/0
[2026-03-08 02:50:36] 2026-03-08 01:50:05,122 | INFO     | sufficient remaining disk space (224637485056 B)
[2026-03-08 02:50:36] 2026-03-08 01:50:05,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 02:50:36] 2026-03-08 01:50:05,122 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 02:50:36] 2026-03-08 01:50:05,122 | INFO     | update_server=False
[2026-03-08 02:50:36] 2026-03-08 01:50:05,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 02:50:36] 2026-03-08 01:50:05,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 02:50:36] 2026-03-08 01:50:05,173 | INFO     | all payload control threads have been joined
[2026-03-08 02:50:36] 2026-03-08 01:50:05,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 02:50:36] 2026-03-08 01:50:05,515 | INFO     | aborting loop
[2026-03-08 02:50:36] 2026-03-08 01:50:05,762 | INFO     | all data control threads have been joined
[2026-03-08 02:50:36] 2026-03-08 01:50:06,128 | INFO     | [job] retrieve thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,128 | INFO     | [job] queue monitor thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,178 | INFO     | [payload] control thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,183 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,290 | INFO     | [payload] failed_post thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,322 | INFO     | all job control threads have been joined
[2026-03-08 02:50:36] 2026-03-08 01:50:06,467 | INFO     | [data] copytool_in thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 02:50:36] 2026-03-08 01:50:06,521 | INFO     | [job] job monitor thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,657 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,729 | INFO     | [payload] validate_post thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:06,767 | INFO     | [data] control thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:07,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:07,328 | INFO     | [job] control thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:07,545 | INFO     | [job] validate thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:08,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 02:50:36] 2026-03-08 01:50:08,515 | INFO     | [data] copytool_out thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:11,014 | INFO     | [monitor] cgroup control has ended
[2026-03-08 02:50:36] 2026-03-08 01:50:12,493 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:16,033 | INFO     | job.realtimelogging is not enabled
[2026-03-08 02:50:36] 2026-03-08 01:50:17,033 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 02:50:36] 2026-03-08 01:50:18,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058971904)>']
[2026-03-08 02:50:36] 2026-03-08 01:50:23,259 | INFO     | all workflow threads have been joined
[2026-03-08 02:50:36] 2026-03-08 01:50:23,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 02:50:36] 2026-03-08 01:50:23,260 | INFO     | traces error code: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:23,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | INFO     | PID=13958 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | INFO     | .. there are 3 such processes running
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 02:50:36] 2026-03-08 01:50:36,183 | INFO     | [monitor] control thread has ended
[2026-03-08 02:50:36] 2026-03-08 01:50:36,232 [wrapper] ==== pilot stdout END ====
[2026-03-08 02:50:36] 2026-03-08 01:50:36,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 02:50:36] 2026-03-08 01:50:36,235 [wrapper] pilotpid: 13958
[2026-03-08 02:50:36] 2026-03-08 01:50:36,235 [wrapper] Pilot exit status: 0
[2026-03-08 02:50:36] 2026-03-08 01:50:36,240 [wrapper] pandaids: 7039152441
[2026-03-08 02:50:36] 2026-03-08 01:50:36,263 [wrapper] cleanup supervisor_pilot  1897 13959
[2026-03-08 02:50:36] 2026-03-08 01:50:36,264 [wrapper] Test setup, not cleaning
[2026-03-08 02:50:36] 2026-03-08 01:50:36,265 [wrapper] apfmon messages muted
[2026-03-08 02:50:36] 2026-03-08 01:50:36,266 [wrapper] ==== wrapper stdout END ====
[2026-03-08 02:50:36] 2026-03-08 01:50:36,267 [wrapper] ==== wrapper stderr END ====
[2026-03-08 02:50:36]  *** Error codes and diagnostics ***
[2026-03-08 02:50:36]     "exeErrorCode": 0,
[2026-03-08 02:50:36]     "exeErrorDiag": "",
[2026-03-08 02:50:36]     "pilotErrorCode": 0,
[2026-03-08 02:50:36]     "pilotErrorDiag": "",
[2026-03-08 02:50:36]  *** Listing of results directory ***
[2026-03-08 02:50:36] total 618616
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    584627 Mar  7 17:25 pilot3.tar.gz
[2026-03-08 02:50:36] -rwx------ 1 mf493845 unix-user     36322 Mar  7 17:27 runpilot2-wrapper.sh
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      5111 Mar  7 17:29 queuedata.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       100 Mar  8 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 02:50:36] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar  8 00:11 run_atlas
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       105 Mar  8 00:11 job.xml
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  8 02:04 start_atlas.sh
[2026-03-08 02:50:36] drwxrwx--x 2 mf493845 unix-user       100 Mar  8 02:04 shared
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user    597960 Mar  8 02:04 input.tar.gz
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      6391 Mar  8 02:04 init_data.xml
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user 440519316 Mar  8 02:04 EVNT.46701403._000353.pool.root.1
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user         0 Mar  8 02:04 boinc_setup_complete
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      8192 Mar  8 02:04 boinc_mmap_file
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user         0 Mar  8 02:04 boinc_lockfile
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      2564 Mar  8 02:04 pandaJob.out
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    999177 Mar  8 02:04 agis_schedconf.cvmfs.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user   1521291 Mar  8 02:04 agis_ddmendpoints.agis.ALL.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       416 Mar  8 02:04 workernode_map.json
[2026-03-08 02:50:36] drwx------ 5 mf493845 unix-user       440 Mar  8 02:04 pilot3
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user 187515458 Mar  8 02:49 HITS.48955006._017637.pool.root.1
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user        95 Mar  8 02:49 pilot_heartbeat.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      1016 Mar  8 02:49 memory_monitor_summary.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    322318 Mar  8 02:50 log.48955006._017637.job.log.tgz.1
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      6312 Mar  8 02:50 heartbeat.json
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       820 Mar  8 02:50 pilotlog.txt
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    442304 Mar  8 02:50 log.48955006._017637.job.log.1
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       357 Mar  8 02:50 output.list
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       620 Mar  8 02:50 runtime_log
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    778240 Mar  8 02:50 result.tar.gz
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user      9219 Mar  8 02:50 runtime_log.err
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user       642 Mar  8 02:50 obMKDmZg9I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmG4TLDmqW0uVn.diag
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user     22099 Mar  8 02:50 stderr.txt
[2026-03-08 02:50:36] HITS file was successfully produced:
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user 187515458 Mar  8 02:49 shared/HITS.pool.root.1
[2026-03-08 02:50:36]  *** Contents of shared directory: ***
[2026-03-08 02:50:36] total 614680
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  8 02:04 start_atlas.sh
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user    597960 Mar  8 02:04 input.tar.gz
[2026-03-08 02:50:36] -rw-r--r-- 2 mf493845 unix-user 440519316 Mar  8 02:04 ATLAS.root_0
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user 187515458 Mar  8 02:49 HITS.pool.root.1
[2026-03-08 02:50:36] -rw------- 1 mf493845 unix-user    778240 Mar  8 02:50 result.tar.gz
02:50:38 (9069): run_atlas exited; CPU time 19183.980317
02:50:38 (9069): called boinc_finish(0)

</stderr_txt>
]]>

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