Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:15 (1990061): wrapper (7.7.26015): starting
15:50:15 (1990061): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 15:50:15] Arguments: --nthreads 4
[2026-03-07 15:50:15] Threads: 4
[2026-03-07 15:50:15] Checking for CVMFS
[2026-03-07 15:50:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 15:50:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 15:50:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 15:50:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 15:50:16] 2.13.3.0 21737 7212 51288 157013 1 188 8677735 102400001 2704 130560 15 5057170 99.989 248675 66 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 15:50:16] CVMFS is ok
[2026-03-07 15:50:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 15:50:16] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 15:50:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 15:50:16] Further information can be found at the LHC@home message board.
[2026-03-07 15:50:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 15:50:16] Checking for apptainer binary...
[2026-03-07 15:50:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 15:50:16] Running /usr/bin/apptainer --version
[2026-03-07 15:50:16] apptainer version 1.4.5
[2026-03-07 15:50:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 15:50:16] T7810-Ubuntu
[2026-03-07 15:50:16] apptainer works
[2026-03-07 15:50:16] Set ATHENA_PROC_NUMBER=4
[2026-03-07 15:50:16] Set ATHENA_CORE_NUMBER=4
[2026-03-07 15:50:16] Starting ATLAS job with PandaID=7039172748
[2026-03-07 15:50:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 18:46:12]  *** The last 200 lines of the pilot log: ***
[2026-03-07 18:46:12] 2026-03-07 23:45:38,633 | INFO     | monitor loop #769: job 0:7039172748 is in state 'finished'
[2026-03-07 18:46:12] 2026-03-07 23:45:38,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,135 | INFO     | job 7039172748 has state=finished
[2026-03-07 18:46:12] 2026-03-07 23:45:39,135 | INFO     | preparing for final server update for job 7039172748 in state='finished'
[2026-03-07 18:46:12] 2026-03-07 23:45:39,135 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/22/PanDA_Pilot-7039172748/jobReport.json
[2026-03-07 18:46:12] 2026-03-07 23:45:39,138 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/22/workernode_map.json
[2026-03-07 18:46:12] 2026-03-07 23:45:39,138 | INFO     | this job has now completed (state=finished)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,138 | INFO     | log transfer has been attempted: DONE
[2026-03-07 18:46:12] 2026-03-07 23:45:39,139 | INFO     | job 7039172748 has finished - writing final server update
[2026-03-07 18:46:12] 2026-03-07 23:45:39,139 | INFO     | total number of processed events: 400 (read)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,153 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/22/PanDA_Pilot-7039172748/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,153 | INFO     | extracted standard info from prmon json
[2026-03-07 18:46:12] 2026-03-07 23:45:39,154 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 18:46:12] 2026-03-07 23:45:39,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 18:46:12] 2026-03-07 23:45:39,154 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 18:46:12] 2026-03-07 23:45:39,154 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 18:46:12] 2026-03-07 23:45:39,157 | INFO     | fitting pss+swap vs Time
[2026-03-07 18:46:12] 2026-03-07 23:45:39,158 | INFO     | sum of square deviations: 1577789583.0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,159 | INFO     | sum of deviations: 6928030653.000001
[2026-03-07 18:46:12] 2026-03-07 23:45:39,159 | INFO     | mean x: 1772921869.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,159 | INFO     | mean y: 2311854.8720930233
[2026-03-07 18:46:12] 2026-03-07 23:45:39,159 | INFO     | intersect: -7782539299.941284
[2026-03-07 18:46:12] 2026-03-07 23:45:39,160 | INFO     | chi2: 1.4579899134866632
[2026-03-07 18:46:12] 2026-03-07 23:45:39,160 | INFO     | sum of square deviations: 1444149868.0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,161 | INFO     | sum of deviations: 6672117962.999998
[2026-03-07 18:46:12] 2026-03-07 23:45:39,161 | INFO     | mean x: 1772921717.0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,161 | INFO     | mean y: 2311562.766467066
[2026-03-07 18:46:12] 2026-03-07 23:45:39,161 | INFO     | intersect: -8188765483.392637
[2026-03-07 18:46:12] 2026-03-07 23:45:39,161 | INFO     | chi2: 1.4587723955997962
[2026-03-07 18:46:12] 2026-03-07 23:45:39,162 | INFO     | current chi2=1.4587723955997962 (change=-0.05366855462407076 %)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,162 | INFO     | right removable region: 166
[2026-03-07 18:46:12] 2026-03-07 23:45:39,162 | INFO     | sum of square deviations: 1444149868.0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,163 | INFO     | sum of deviations: -14767312917.000004
[2026-03-07 18:46:12] 2026-03-07 23:45:39,163 | INFO     | mean x: 1772922022.0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,163 | INFO     | mean y: 2336223.431137725
[2026-03-07 18:46:12] 2026-03-07 23:45:39,163 | INFO     | intersect: 18131544871.68091
[2026-03-07 18:46:12] 2026-03-07 23:45:39,164 | INFO     | chi2: 0.08204558889244586
[2026-03-07 18:46:12] 2026-03-07 23:45:39,164 | INFO     | current chi2=0.08204558889244586 (change=94.3726915986517 %)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,164 | INFO     | sum of square deviations: 1318277740.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,165 | INFO     | sum of deviations: -11937637383.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,165 | INFO     | mean x: 1772922174.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,165 | INFO     | mean y: 2332770.1666666665
[2026-03-07 18:46:12] 2026-03-07 23:45:39,165 | INFO     | intersect: 16056993619.040575
[2026-03-07 18:46:12] 2026-03-07 23:45:39,166 | INFO     | chi2: 0.07564918673245843
[2026-03-07 18:46:12] 2026-03-07 23:45:39,166 | INFO     | current chi2=0.07564918673245843 (change=7.796156071684135 %)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,166 | INFO     | left removable region: 20
[2026-03-07 18:46:12] 2026-03-07 23:45:39,166 | INFO     | sum of square deviations: 964976232.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,167 | INFO     | sum of deviations: -3295862299.4999995
[2026-03-07 18:46:12] 2026-03-07 23:45:39,167 | INFO     | mean x: 1772922296.5
[2026-03-07 18:46:12] 2026-03-07 23:45:39,167 | INFO     | mean y: 2321220.294520548
[2026-03-07 18:46:12] 2026-03-07 23:45:39,167 | INFO     | intersect: 6057711560.675064
[2026-03-07 18:46:12] 2026-03-07 23:45:39,168 | INFO     | chi2: 0.03522336599551984
[2026-03-07 18:46:12] 2026-03-07 23:45:39,168 | INFO     | current memory leak: -3.42 B/s (using 146 data points, chi2=0.04)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,168 | INFO     | could have reported an average CPU frequency of 2778 MHz (9 samples)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,168 | INFO     | ..............................
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . Timing measurements:
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . get job = 0 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . initial setup = 7 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . payload setup = 5 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . stage-in = 0 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . payload execution = 10480 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . stage-out = 0 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | . log creation = 0 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,169 | INFO     | ..............................
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | 
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | job summary report
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | --------------------------------------------------
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | PanDA job id: 7039172748
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | task id: 48955010
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | errors: (none)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | pilot state: finished 
[2026-03-07 18:46:12] 2026-03-07 23:45:39,265 | INFO     | transexitcode: 0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | exeerrorcode: 0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | exeerrordiag: 
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | exitcode: 0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | exitmsg: OK
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | cpuconsumptiontime: 40745 s
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | nevents: 400
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | neventsw: 0
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | pid: 1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | pgrp: 1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | corecount: 4
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | event service: False
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | sizes: {0: 2295336, 1: 2295797, 11: 2295797, 10490: 2324600, 10491: 2333628, 10493: 2333684, 10495: 2334070}
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | --------------------------------------------------
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | 
[2026-03-07 18:46:12] 2026-03-07 23:45:39,266 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/22
[2026-03-07 18:46:12] 2026-03-07 23:45:39,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,294 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 18:46:12] 2026-03-07 23:45:39,294 | INFO     | job 7039172748 has completed (purged errors)
[2026-03-07 18:46:12] 2026-03-07 23:45:39,294 | INFO     | overall cleanup function is called
[2026-03-07 18:46:12] 2026-03-07 23:45:40,302 | INFO     | --- collectZombieJob: --- 10, [1998866]
[2026-03-07 18:46:12] 2026-03-07 23:45:40,302 | INFO     | zombie collector waiting for pid 1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:40,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 18:46:12] 2026-03-07 23:45:40,302 | INFO     | collected zombie processes
[2026-03-07 18:46:12] 2026-03-07 23:45:40,303 | INFO     | will attempt to kill all subprocesses of pid=1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:40,664 | INFO     | process IDs to be killed: [1998866] (in reverse order)
[2026-03-07 18:46:12] 2026-03-07 23:45:40,758 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 18:46:12] 2026-03-07 23:45:40,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 18:46:12] 2026-03-07 23:45:40,767 | INFO     | did not find any defunct processes belonging to 1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:40,775 | INFO     | did not find any defunct processes belonging to 1998866
[2026-03-07 18:46:12] 2026-03-07 23:45:40,776 | INFO     | ready for new job
[2026-03-07 18:46:12] 2026-03-07 23:45:40,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 18:46:12] 2026-03-07 23:45:40,778 | INFO     | **************************************
[2026-03-07 18:46:12] 2026-03-07 23:45:40,778 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 18:46:12] 2026-03-07 23:45:40,778 | INFO     | **************************************
[2026-03-07 18:46:12] 2026-03-07 23:45:40,778 | INFO     | 
[2026-03-07 18:46:12] 2026-03-07 23:45:40,783 | INFO     | architecture information:
[2026-03-07 18:46:12] 2026-03-07 23:45:40,783 | INFO     | executing command: cat /etc/os-release
[2026-03-07 18:46:12] 2026-03-07 23:45:40,802 | INFO     | cat /etc/os-release:
[2026-03-07 18:46:12] NAME="CentOS Linux"
[2026-03-07 18:46:12] VERSION="7 (Core)"
[2026-03-07 18:46:12] ID="centos"
[2026-03-07 18:46:12] ID_LIKE="rhel fedora"
[2026-03-07 18:46:12] VERSION_ID="7"
[2026-03-07 18:46:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 18:46:12] ANSI_COLOR="0;31"
[2026-03-07 18:46:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 18:46:12] HOME_URL="https://www.centos.org/"
[2026-03-07 18:46:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 18:46:12] 
[2026-03-07 18:46:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 18:46:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 18:46:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 18:46:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 18:46:12] 
[2026-03-07 18:46:12] 2026-03-07 23:45:40,802 | INFO     | **************************************
[2026-03-07 18:46:12] 2026-03-07 23:45:41,304 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/22
[2026-03-07 18:46:12] 2026-03-07 23:45:41,328 | INFO     | sufficient remaining disk space (400138698752 B)
[2026-03-07 18:46:12] 2026-03-07 23:45:41,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 18:46:12] 2026-03-07 23:45:41,329 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 18:46:12] 2026-03-07 23:45:41,329 | INFO     | update_server=False
[2026-03-07 18:46:12] 2026-03-07 23:45:41,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 18:46:12] 2026-03-07 23:45:41,634 | INFO     | all payload control threads have been joined
[2026-03-07 18:46:12] 2026-03-07 23:45:41,979 | INFO     | all data control threads have been joined
[2026-03-07 18:46:12] 2026-03-07 23:45:42,041 | INFO     | all job control threads have been joined
[2026-03-07 18:46:12] 2026-03-07 23:45:42,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:46:12] 2026-03-07 23:45:42,139 | INFO     | aborting loop
[2026-03-07 18:46:12] 2026-03-07 23:45:42,334 | INFO     | [job] retrieve thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:42,640 | INFO     | [payload] control thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:42,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 18:46:12] 2026-03-07 23:45:42,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:42,856 | INFO     | [payload] validate_post thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:42,930 | INFO     | [job] validate thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:42,984 | INFO     | [data] control thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,046 | INFO     | [job] control thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,145 | INFO     | [job] job monitor thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,273 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,315 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 18:46:12] 2026-03-07 23:45:43,409 | INFO     | [payload] failed_post thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,706 | INFO     | [data] copytool_in thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:43,764 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:44,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:46:12] 2026-03-07 23:45:44,739 | INFO     | [data] copytool_out thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:45,279 | INFO     | [job] queue monitor thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:47,406 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 18:46:12] 2026-03-07 23:45:48,896 | INFO     | [monitor] cgroup control has ended
[2026-03-07 18:46:12] 2026-03-07 23:45:50,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124083995047744)>', '<ExcThread(monitor, started 124083215791872)>']
[2026-03-07 18:46:12] 2026-03-07 23:45:55,506 | INFO     | all workflow threads have been joined
[2026-03-07 18:46:12] 2026-03-07 23:45:55,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 18:46:12] 2026-03-07 23:45:55,507 | INFO     | traces error code: 0
[2026-03-07 18:46:12] 2026-03-07 23:45:55,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 18:46:12] 2026-03-07 23:46:11,798 | INFO     | PID=1994092 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 18:46:12] 2026-03-07 23:46:11,799 | INFO     | .. there are 3 such processes running
[2026-03-07 18:46:12] 2026-03-07 23:46:11,800 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 18:46:12] 2026-03-07 23:46:11,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 18:46:12] 2026-03-07 23:46:11,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 18:46:12] 2026-03-07 23:46:11,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 18:46:12] 2026-03-07 23:46:11,800 | INFO     | [monitor] control thread has ended
[2026-03-07 18:46:12] 2026-03-07 23:46:11,929 [wrapper] ==== pilot stdout END ====
[2026-03-07 18:46:12] 2026-03-07 23:46:11,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 18:46:12] 2026-03-07 23:46:11,935 [wrapper] pilotpid: 1994092
[2026-03-07 18:46:12] 2026-03-07 23:46:11,938 [wrapper] Pilot exit status: 0
[2026-03-07 18:46:12] 2026-03-07 23:46:11,947 [wrapper] pandaids: 7039172748
[2026-03-07 18:46:12] 2026-03-07 23:46:11,996 [wrapper] cleanup supervisor_pilot 2037458 1994093
[2026-03-07 18:46:12] 2026-03-07 23:46:12,000 [wrapper] Test setup, not cleaning
[2026-03-07 18:46:12] 2026-03-07 23:46:12,003 [wrapper] apfmon messages muted
[2026-03-07 18:46:12] 2026-03-07 23:46:12,005 [wrapper] ==== wrapper stdout END ====
[2026-03-07 18:46:12] 2026-03-07 23:46:12,007 [wrapper] ==== wrapper stderr END ====
[2026-03-07 18:46:12]  *** Error codes and diagnostics ***
[2026-03-07 18:46:12]     "exeErrorCode": 0,
[2026-03-07 18:46:12]     "exeErrorDiag": "",
[2026-03-07 18:46:12]     "pilotErrorCode": 0,
[2026-03-07 18:46:12]     "pilotErrorDiag": "",
[2026-03-07 18:46:12]  *** Listing of results directory ***
[2026-03-07 18:46:12] total 613984
[2026-03-07 18:46:12] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 11:25 pilot3.tar.gz
[2026-03-07 18:46:12] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 11:25 runpilot2-wrapper.sh
[2026-03-07 18:46:12] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 11:27 queuedata.json
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 18:46:12] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 15:50 run_atlas
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 15:50 job.xml
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd 439370083 Mar  7 15:50 EVNT.46701403._001237.pool.root.1
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 15:50 start_atlas.sh
[2026-03-07 18:46:12] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 15:50 shared
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd    597952 Mar  7 15:50 input.tar.gz
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd      9127 Mar  7 15:50 init_data.xml
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 15:50 boinc_setup_complete
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 15:50 boinc_lockfile
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  7 15:50 pandaJob.out
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd    999169 Mar  7 15:50 agis_schedconf.cvmfs.json
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 15:50 agis_ddmendpoints.agis.ALL.json
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd       434 Mar  7 15:50 workernode_map.json
[2026-03-07 18:46:12] drwx------ 5 whitlerd whitlerd      4096 Mar  7 15:50 pilot3
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd 181633810 Mar  7 18:44 HITS.48955010._011849.pool.root.1
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  7 18:45 boinc_task_state.xml
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd      1030 Mar  7 18:45 memory_monitor_summary.json
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd    382533 Mar  7 18:45 log.48955010._011849.job.log.tgz.1
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd      6350 Mar  7 18:45 heartbeat.json
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  7 18:46 wrapper_checkpoint.txt
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 18:46 boinc_mmap_file
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd        95 Mar  7 18:46 pilot_heartbeat.json
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd       822 Mar  7 18:46 pilotlog.txt
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd   1504510 Mar  7 18:46 log.48955010._011849.job.log.1
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd       357 Mar  7 18:46 output.list
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 18:46 runtime_log
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd   1904640 Mar  7 18:46 result.tar.gz
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd       650 Mar  7 18:46 wgdLDmae9I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmP3TLDmMWSzhm.diag
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  7 18:46 runtime_log.err
[2026-03-07 18:46:12] -rw-rw-r-- 1 whitlerd whitlerd     21427 Mar  7 18:46 stderr.txt
[2026-03-07 18:46:12] HITS file was successfully produced:
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd 181633810 Mar  7 18:44 shared/HITS.pool.root.1
[2026-03-07 18:46:12]  *** Contents of shared directory: ***
[2026-03-07 18:46:12] total 608924
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd 439370083 Mar  7 15:50 ATLAS.root_0
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 15:50 start_atlas.sh
[2026-03-07 18:46:12] -rw-r--r-- 2 whitlerd whitlerd    597952 Mar  7 15:50 input.tar.gz
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd 181633810 Mar  7 18:44 HITS.pool.root.1
[2026-03-07 18:46:12] -rw------- 1 whitlerd whitlerd   1904640 Mar  7 18:46 result.tar.gz
18:46:13 (1990061): run_atlas exited; CPU time 41145.496816
18:46:13 (1990061): called boinc_finish(0)

</stderr_txt>
]]>

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