Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:05:59 (2779883): wrapper (7.7.26015): starting
12:05:59 (2779883): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 12:05:59] Arguments: --nthreads 4
[2026-03-08 12:05:59] Threads: 4
[2026-03-08 12:05:59] Checking for CVMFS
[2026-03-08 12:05:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 12:05:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 12:05:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 12:05:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 12:05:59] 2.9.2.0 79673 15532 103636 157036 3 50 29421857 36864001 0 130560 0 7074399 99.984 593095 8674 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 12:05:59] CVMFS is ok
[2026-03-08 12:05:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 12:05:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 12:05:59] Further information can be found at the LHC@home message board.
[2026-03-08 12:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 12:05:59] Checking for apptainer binary...
[2026-03-08 12:05:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 12:05:59] Running /usr/bin/apptainer --version
[2026-03-08 12:05:59] apptainer version 1.4.1-1.1
[2026-03-08 12:05:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 12:06:00] thA309
[2026-03-08 12:06:00] apptainer works
[2026-03-08 12:06:00] Set ATHENA_PROC_NUMBER=4
[2026-03-08 12:06:00] Set ATHENA_CORE_NUMBER=4
[2026-03-08 12:06:00] Starting ATLAS job with PandaID=7039266093
[2026-03-08 12:06:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 13:14:25]  *** The last 200 lines of the pilot log: ***
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | INFO     | update_server=False
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | INFO     | aborting loop
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 13:14:25] 2026-03-08 12:13:24,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 13:14:25] 2026-03-08 12:13:24,425 | INFO     | all job control threads have been joined
[2026-03-08 13:14:25] 2026-03-08 12:13:24,445 | INFO     | all data control threads have been joined
[2026-03-08 13:14:25] 2026-03-08 12:13:25,257 | INFO     | [job] retrieve thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,258 | INFO     | [job] job monitor thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,258 | INFO     | [job] queue monitor thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,327 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,431 | INFO     | [job] control thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,451 | INFO     | [data] control thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,451 | INFO     | [data] copytool_in thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:25,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 13:14:25] 2026-03-08 12:13:25,559 | INFO     | all payload control threads have been joined
[2026-03-08 13:14:25] 2026-03-08 12:13:25,779 | INFO     | job.realtimelogging is not enabled
[2026-03-08 13:14:25] 2026-03-08 12:13:26,027 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,260 | INFO     | [payload] validate_post thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,418 | INFO     | [payload] failed_post thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,565 | INFO     | [payload] control thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,645 | INFO     | [job] validate thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,746 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:26,785 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:27,458 | INFO     | [data] copytool_out thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:28,259 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 13:14:25] 2026-03-08 12:13:54,565 | INFO     | PID=2783998 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 13:14:25] 2026-03-08 12:13:54,565 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 13:14:25] 2026-03-08 12:13:54,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 13:14:25] 2026-03-08 12:13:54,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 13:14:25] 2026-03-08 12:14:18,204 | INFO     | [monitor] cgroup control has ended
[2026-03-08 13:14:25] 2026-03-08 12:14:20,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669355194176)>', '<ExcThread(monitor, started 140668450084608)>']
[2026-03-08 13:14:25] 2026-03-08 12:14:20,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 13:14:25] 2026-03-08 12:14:20,700 | INFO     | [monitor] control thread has ended
[2026-03-08 13:14:25] 2026-03-08 12:14:25,125 | INFO     | all workflow threads have been joined
[2026-03-08 13:14:25] 2026-03-08 12:14:25,125 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 13:14:25] 2026-03-08 12:14:25,125 | INFO     | traces error code: 0
[2026-03-08 13:14:25] 2026-03-08 12:14:25,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 13:14:25] 2026-03-08 12:14:25,217 [wrapper] ==== pilot stdout END ====
[2026-03-08 13:14:25] 2026-03-08 12:14:25,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 13:14:25] 2026-03-08 12:14:25,225 [wrapper] pilotpid: 2783998
[2026-03-08 13:14:25] 2026-03-08 12:14:25,229 [wrapper] Pilot exit status: 0
[2026-03-08 13:14:25] 2026-03-08 12:14:25,241 [wrapper] pandaids: 7039266093
[2026-03-08 13:14:25] 2026-03-08 12:14:25,267 [wrapper] cleanup supervisor_pilot 2794466 2783999
[2026-03-08 13:14:25] 2026-03-08 12:14:25,271 [wrapper] Test setup, not cleaning
[2026-03-08 13:14:25] 2026-03-08 12:14:25,276 [wrapper] apfmon messages muted
[2026-03-08 13:14:25] 2026-03-08 12:14:25,280 [wrapper] ==== wrapper stdout END ====
[2026-03-08 13:14:25] 2026-03-08 12:14:25,284 [wrapper] ==== wrapper stderr END ====
[2026-03-08 13:14:25]  *** Error codes and diagnostics ***
[2026-03-08 13:14:25]     "exeErrorCode": 0,
[2026-03-08 13:14:25]     "exeErrorDiag": "",
[2026-03-08 13:14:25]     "pilotErrorCode": 0,
[2026-03-08 13:14:25]     "pilotErrorDiag": "",
[2026-03-08 13:14:25]  *** Listing of results directory ***
[2026-03-08 13:14:25] total 615144
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      5111 Mar  7 21:25 queuedata.json
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc    584627 Mar  7 21:25 pilot3.tar.gz
[2026-03-08 13:14:25] -rwx------ 1 boinc boinc     36322 Mar  7 21:25 runpilot2-wrapper.sh
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc       100 Mar  8 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 13:14:25] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 12:05 run_atlas
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc       105 Mar  8 12:05 job.xml
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc 444049200 Mar  8 12:05 EVNT.46701403._000384.pool.root.1
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc    597952 Mar  8 12:05 input.tar.gz
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc     15845 Mar  8 12:05 start_atlas.sh
[2026-03-08 13:14:25] drwxrwx--x 2 boinc boinc      4096 Mar  8 12:05 shared
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc         0 Mar  8 12:05 boinc_setup_complete
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      6377 Mar  8 12:05 init_data.xml
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc         0 Mar  8 12:05 boinc_lockfile
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      2563 Mar  8 12:06 pandaJob.out
[2026-03-08 13:14:25] -rw------- 1 boinc boinc    999169 Mar  8 12:06 agis_schedconf.cvmfs.json
[2026-03-08 13:14:25] -rw------- 1 boinc boinc   1521291 Mar  8 12:06 agis_ddmendpoints.agis.ALL.json
[2026-03-08 13:14:25] -rw------- 1 boinc boinc       427 Mar  8 12:06 workernode_map.json
[2026-03-08 13:14:25] drwx------ 5 boinc boinc      4096 Mar  8 12:06 pilot3
[2026-03-08 13:14:25] -rw------- 1 boinc boinc 180232273 Mar  8 13:13 HITS.48955006._019159.pool.root.1
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc       530 Mar  8 13:13 boinc_task_state.xml
[2026-03-08 13:14:25] -rw------- 1 boinc boinc      1019 Mar  8 13:13 memory_monitor_summary.json
[2026-03-08 13:14:25] -rw------- 1 boinc boinc    247532 Mar  8 13:13 log.48955006._019159.job.log.tgz.1
[2026-03-08 13:14:25] -rw------- 1 boinc boinc      6306 Mar  8 13:13 heartbeat.json
[2026-03-08 13:14:25] -rw------- 1 boinc boinc        95 Mar  8 13:13 pilot_heartbeat.json
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      8192 Mar  8 13:14 boinc_mmap_file
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc        27 Mar  8 13:14 wrapper_checkpoint.txt
[2026-03-08 13:14:25] -rw------- 1 boinc boinc      4820 Mar  8 13:14 pilotlog.txt
[2026-03-08 13:14:25] -rw------- 1 boinc boinc    601287 Mar  8 13:14 log.48955006._019159.job.log.1
[2026-03-08 13:14:25] -rw------- 1 boinc boinc       357 Mar  8 13:14 output.list
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc       620 Mar  8 13:14 runtime_log
[2026-03-08 13:14:25] -rw------- 1 boinc boinc    870400 Mar  8 13:14 result.tar.gz
[2026-03-08 13:14:25] -rw------- 1 boinc boinc       657 Mar  8 13:14 uf9NDmYODJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvxWLDmPwReIm.diag
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      8896 Mar  8 13:14 runtime_log.err
[2026-03-08 13:14:25] -rw-r--r-- 1 boinc boinc      7509 Mar  8 13:14 stderr.txt
[2026-03-08 13:14:25] HITS file was successfully produced:
[2026-03-08 13:14:25] -rw------- 1 boinc boinc 180232273 Mar  8 13:13 shared/HITS.pool.root.1
[2026-03-08 13:14:25]  *** Contents of shared directory: ***
[2026-03-08 13:14:25] total 611116
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc 444049200 Mar  8 12:05 ATLAS.root_0
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc    597952 Mar  8 12:05 input.tar.gz
[2026-03-08 13:14:25] -rw-r--r-- 2 boinc boinc     15845 Mar  8 12:05 start_atlas.sh
[2026-03-08 13:14:25] -rw------- 1 boinc boinc 180232273 Mar  8 13:13 HITS.pool.root.1
[2026-03-08 13:14:25] -rw------- 1 boinc boinc    870400 Mar  8 13:14 result.tar.gz
13:14:26 (2779883): run_atlas exited; CPU time 15026.483692
13:14:26 (2779883): called boinc_finish(0)

</stderr_txt>
]]>

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