Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:02:19 (3443406): wrapper (7.7.26015): starting
19:02:19 (3443406): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 19:02:19] Arguments: --nthreads 4
[2026-03-09 19:02:19] Threads: 4
[2026-03-09 19:02:19] Checking for CVMFS
[2026-03-09 19:02:19] No cvmfs_config command found, will try listing directly
[2026-03-09 19:02:19] CVMFS is ok
[2026-03-09 19:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 19:02:19] Further information can be found at the LHC@home message board.
[2026-03-09 19:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:02:19] Checking for apptainer binary...
[2026-03-09 19:02:19] which: no apptainer in ((null))
[2026-03-09 19:02:19] apptainer is not installed, using version from CVMFS
[2026-03-09 19:02:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:02:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-09 19:02:19] apptainer works
[2026-03-09 19:02:19] Set ATHENA_PROC_NUMBER=4
[2026-03-09 19:02:19] Set ATHENA_CORE_NUMBER=4
[2026-03-09 19:02:19] Starting ATLAS job with PandaID=7039152918
[2026-03-09 19:02:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:20:45]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:20:45]  guid=3f63fc41-92d2-410c-9d7a-b73ca1a3c045
[2026-03-09 20:20:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 20:20:45]  is_altstaged=None
[2026-03-09 20:20:45]  is_tar=False
[2026-03-09 20:20:45]  lfn=log.48955006._017889.job.log.tgz.1
[2026-03-09 20:20:45]  mtime=0
[2026-03-09 20:20:45]  protocol_id=None
[2026-03-09 20:20:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 20:20:45]  replicas=None
[2026-03-09 20:20:45]  scope=mc23_13p6TeV
[2026-03-09 20:20:45]  status=None
[2026-03-09 20:20:45]  status_code=0
[2026-03-09 20:20:45]  storage_token=
[2026-03-09 20:20:45]  surl=/var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/log.48955006._017889.job.log.tgz.1
[2026-03-09 20:20:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/46/log.48955006._017889.job.log.tgz.1
[2026-03-09 20:20:45]  workdir=None
[2026-03-09 20:20:45] ]
[2026-03-09 20:20:45] 2026-03-09 19:19:55,660 | INFO     | transferring file log.48955006._017889.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/log.48955006._017889.job.log.tgz.1 to /var/lib/b
[2026-03-09 20:20:45] 2026-03-09 19:19:55,661 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/log.48955006._017889.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/5/lo
[2026-03-09 20:20:45] 2026-03-09 19:19:55,686 | INFO     | adding to output.list: log.48955006._017889.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/46/log.48955006._017889.job.log.tg
[2026-03-09 20:20:45] 2026-03-09 19:19:55,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 20:20:45] 2026-03-09 19:19:55,687 | INFO     | summary of transferred files:
[2026-03-09 20:20:45] 2026-03-09 19:19:55,687 | INFO     |  -- lfn=log.48955006._017889.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 20:20:45] 2026-03-09 19:19:55,687 | INFO     | stage-out finished correctly
[2026-03-09 20:20:45] 2026-03-09 19:19:55,902 | WARNING  | process 3454198 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 20:20:45] 2026-03-09 19:19:55,903 | INFO     | using path: /var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,418 | INFO     | time since job start (4644s) is within the limit (349056.0s)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,428 | INFO     | number of running child processes to parent process 3454198: 1
[2026-03-09 20:20:45] 2026-03-09 19:19:56,428 | INFO     | maximum number of monitored processes: 6
[2026-03-09 20:20:45] 2026-03-09 19:19:56,456 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 20:20:45] 2026-03-09 19:19:56,697 | INFO     | job 7039152918 has state=finished
[2026-03-09 20:20:45] 2026-03-09 19:19:56,698 | INFO     | preparing for final server update for job 7039152918 in state='finished'
[2026-03-09 20:20:45] 2026-03-09 19:19:56,698 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/jobReport.json
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/5/workernode_map.json
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | this job has now completed (state=finished)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | log transfer has been attempted: DONE
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | job 7039152918 has finished - writing final server update
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1571852/.job.ad'
[2026-03-09 20:20:45] 2026-03-09 19:19:56,700 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,718 | INFO     | using path: /var/lib/boinc/var/slot44/slots/5/PanDA_Pilot-7039152918/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,719 | INFO     | extracted standard info from prmon json
[2026-03-09 20:20:45] 2026-03-09 19:19:56,719 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:20:45] 2026-03-09 19:19:56,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:20:45] 2026-03-09 19:19:56,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:20:45] 2026-03-09 19:19:56,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:20:45] 2026-03-09 19:19:56,720 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:20:45] 2026-03-09 19:19:56,720 | INFO     | sum of square deviations: 101843770.0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | sum of deviations: 309391634.00000006
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | mean x: 1773081752.0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | mean y: 2326475.362318841
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | intersect: -5384126328.445541
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | chi2: 0.0001550571566361668
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | current memory leak: 3.04 B/s (using 69 data points, chi2=0.00)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | could have reported an average CPU frequency of 3547 MHz (6 samples)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | ..............................
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . Timing measurements:
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . get job = 0 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . initial setup = 5 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . payload setup = 5 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . stage-in = 0 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . payload execution = 4622 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . stage-out = 0 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | . log creation = 0 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,721 | INFO     | ..............................
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | 
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | job summary report
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | --------------------------------------------------
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | PanDA job id: 7039152918
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | task id: 48955006
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | errors: (none)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | pilot state: finished 
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | transexitcode: 0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | exeerrorcode: 0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | exeerrordiag: 
[2026-03-09 20:20:45] 2026-03-09 19:19:56,768 | INFO     | exitcode: 0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,769 | INFO     | exitmsg: OK
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | cpuconsumptiontime: 17679 s
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | nevents: 400
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | neventsw: 0
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | pid: 3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | pgrp: 3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | corecount: 4
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | event service: False
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | sizes: {0: 2280241, 11: 2280241, 4630: 2306554, 4632: 2315574, 4633: 2315824}
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | --------------------------------------------------
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | 
[2026-03-09 20:20:45] 2026-03-09 19:19:56,771 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/5
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | job 7039152918 has completed (purged errors)
[2026-03-09 20:20:45] 2026-03-09 19:19:56,791 | INFO     | overall cleanup function is called
[2026-03-09 20:20:45] 2026-03-09 19:19:57,798 | INFO     | --- collectZombieJob: --- 10, [3454198]
[2026-03-09 20:20:45] 2026-03-09 19:19:57,798 | INFO     | zombie collector waiting for pid 3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:57,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:20:45] 2026-03-09 19:19:57,799 | INFO     | collected zombie processes
[2026-03-09 20:20:45] 2026-03-09 19:19:57,799 | INFO     | will attempt to kill all subprocesses of pid=3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:58,301 | INFO     | process IDs to be killed: [3454198] (in reverse order)
[2026-03-09 20:20:45] 2026-03-09 19:19:58,552 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:20:45] 2026-03-09 19:19:58,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:20:45] 2026-03-09 19:19:58,585 | INFO     | did not find any defunct processes belonging to 3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:58,616 | INFO     | did not find any defunct processes belonging to 3454198
[2026-03-09 20:20:45] 2026-03-09 19:19:58,616 | INFO     | ready for new job
[2026-03-09 20:20:45] 2026-03-09 19:19:58,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:20:45] 2026-03-09 19:19:58,617 | INFO     | **************************************
[2026-03-09 20:20:45] 2026-03-09 19:19:58,617 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:20:45] 2026-03-09 19:19:58,617 | INFO     | **************************************
[2026-03-09 20:20:45] 2026-03-09 19:19:58,617 | INFO     | 
[2026-03-09 20:20:45] 2026-03-09 19:19:58,622 | INFO     | architecture information:
[2026-03-09 20:20:45] 2026-03-09 19:19:58,623 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:20:45] 2026-03-09 19:19:58,634 | INFO     | cat /etc/os-release:
[2026-03-09 20:20:45] NAME="CentOS Linux"
[2026-03-09 20:20:45] VERSION="7 (Core)"
[2026-03-09 20:20:45] ID="centos"
[2026-03-09 20:20:45] ID_LIKE="rhel fedora"
[2026-03-09 20:20:45] VERSION_ID="7"
[2026-03-09 20:20:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:20:45] ANSI_COLOR="0;31"
[2026-03-09 20:20:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:20:45] HOME_URL="https://www.centos.org/"
[2026-03-09 20:20:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:20:45] 
[2026-03-09 20:20:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:20:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:20:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:20:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:20:45] 
[2026-03-09 20:20:45] 2026-03-09 19:19:58,634 | INFO     | **************************************
[2026-03-09 20:20:45] 2026-03-09 19:19:59,136 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/5
[2026-03-09 20:20:45] 2026-03-09 19:19:59,152 | INFO     | sufficient remaining disk space (21590179840 B)
[2026-03-09 20:20:45] 2026-03-09 19:19:59,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:20:45] 2026-03-09 19:19:59,152 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:20:45] 2026-03-09 19:19:59,152 | INFO     | update_server=False
[2026-03-09 20:20:45] 2026-03-09 19:19:59,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:20:45] 2026-03-09 19:19:59,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:20:45] 2026-03-09 19:19:59,212 | INFO     | all job control threads have been joined
[2026-03-09 20:20:45] 2026-03-09 19:19:59,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:20:45] 2026-03-09 19:19:59,936 | INFO     | aborting loop
[2026-03-09 20:20:45] 2026-03-09 19:19:59,943 | INFO     | all data control threads have been joined
[2026-03-09 20:20:45] 2026-03-09 19:20:00,157 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,184 | INFO     | all payload control threads have been joined
[2026-03-09 20:20:45] 2026-03-09 19:20:00,217 | INFO     | [job] control thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,490 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,639 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,778 | INFO     | [job] validate thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,908 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,941 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,948 | INFO     | [data] control thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:00,955 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,097 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,157 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,189 | INFO     | [payload] control thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,209 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:01,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:20:45] 2026-03-09 19:20:02,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:20:45] 2026-03-09 19:20:02,782 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:06,516 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:20:45] 2026-03-09 19:20:30,024 | INFO     | PID=3448048 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 20:20:45] 2026-03-09 19:20:30,024 | INFO     | .. there are 58 such processes running
[2026-03-09 20:20:45] 2026-03-09 19:20:30,025 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:20:45] 2026-03-09 19:20:30,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:20:45] 2026-03-09 19:20:30,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:20:45] 2026-03-09 19:20:39,480 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:20:45] 2026-03-09 19:20:40,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22905815222080)>', '<ExcThread(monitor, started 22905575712512)>']
[2026-03-09 20:20:45] 2026-03-09 19:20:41,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:20:45] 2026-03-09 19:20:41,080 | INFO     | [monitor] control thread has ended
[2026-03-09 20:20:45] 2026-03-09 19:20:45,234 | INFO     | all workflow threads have been joined
[2026-03-09 20:20:45] 2026-03-09 19:20:45,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:20:45] 2026-03-09 19:20:45,235 | INFO     | traces error code: 0
[2026-03-09 20:20:45] 2026-03-09 19:20:45,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:20:45] 2026-03-09 19:20:45,358 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:20:45] 2026-03-09 19:20:45,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:20:45] 2026-03-09 19:20:45,363 [wrapper] pilotpid: 3448048
[2026-03-09 20:20:45] 2026-03-09 19:20:45,365 [wrapper] Pilot exit status: 0
[2026-03-09 20:20:45] 2026-03-09 19:20:45,376 [wrapper] pandaids: 7039152918
[2026-03-09 20:20:45] 2026-03-09 19:20:45,506 [wrapper] cleanup supervisor_pilot   32962 3448049
[2026-03-09 20:20:45] 2026-03-09 19:20:45,509 [wrapper] Test setup, not cleaning
[2026-03-09 20:20:45] 2026-03-09 19:20:45,512 [wrapper] apfmon messages muted
[2026-03-09 20:20:45] 2026-03-09 19:20:45,514 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:20:45] 2026-03-09 19:20:45,517 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:20:45]  *** Error codes and diagnostics ***
[2026-03-09 20:20:45]     "exeErrorCode": 0,
[2026-03-09 20:20:45]     "exeErrorDiag": "",
[2026-03-09 20:20:45]     "pilotErrorCode": 0,
[2026-03-09 20:20:45]     "pilotErrorDiag": "",
[2026-03-09 20:20:45]  *** Listing of results directory ***
[2026-03-09 20:20:45] total 602657
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc    584627 Mar  7 17:25 pilot3.tar.gz
[2026-03-09 20:20:45] -rwx------. 1 boinc boinc     36322 Mar  7 17:25 runpilot2-wrapper.sh
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc      5111 Mar  7 17:25 queuedata.json
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc       100 Mar  9 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:20:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 19:02 run_atlas
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc       105 Mar  9 19:02 job.xml
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc 435682962 Mar  9 19:02 EVNT.46701403._000358.pool.root.1
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc      6703 Mar  9 19:02 init_data.xml
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:02 start_atlas.sh
[2026-03-09 20:20:45] drwxrwx--x. 2 boinc boinc         5 Mar  9 19:02 shared
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc    597955 Mar  9 19:02 input.tar.gz
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc         0 Mar  9 19:02 boinc_lockfile
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc      2564 Mar  9 19:02 pandaJob.out
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc   1002716 Mar  9 19:02 agis_schedconf.cvmfs.json
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc   1511578 Mar  9 19:02 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc       444 Mar  9 19:02 workernode_map.json
[2026-03-09 20:20:45] drwx------. 5 boinc boinc        22 Mar  9 19:02 pilot3
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc 178890049 Mar  9 20:19 HITS.48955006._017889.pool.root.1
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc       530 Mar  9 20:19 boinc_task_state.xml
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc      1044 Mar  9 20:19 memory_monitor_summary.json
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc    291574 Mar  9 20:19 log.48955006._017889.job.log.tgz.1
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc      6377 Mar  9 20:19 heartbeat.json
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc        95 Mar  9 20:20 pilot_heartbeat.json
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:20 boinc_mmap_file
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:20 wrapper_checkpoint.txt
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc      4829 Mar  9 20:20 pilotlog.txt
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc    680250 Mar  9 20:20 log.48955006._017889.job.log.1
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc       357 Mar  9 20:20 output.list
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:20 runtime_log
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc    993280 Mar  9 20:20 result.tar.gz
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc      9204 Mar  9 20:20 runtime_log.err
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc       670 Mar  9 20:20 T0nMDmqd9I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNQWLDmzIQ1Vo.diag
[2026-03-09 20:20:45] -rw-r--r--. 1 boinc boinc     21276 Mar  9 20:20 stderr.txt
[2026-03-09 20:20:45] HITS file was successfully produced:
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc 178890049 Mar  9 20:19 shared/HITS.pool.root.1
[2026-03-09 20:20:45]  *** Contents of shared directory: ***
[2026-03-09 20:20:45] total 601199
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc 435682962 Mar  9 19:02 ATLAS.root_0
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:02 start_atlas.sh
[2026-03-09 20:20:45] -rw-r--r--. 2 boinc boinc    597955 Mar  9 19:02 input.tar.gz
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc 178890049 Mar  9 20:19 HITS.pool.root.1
[2026-03-09 20:20:45] -rw-------. 1 boinc boinc    993280 Mar  9 20:20 result.tar.gz
20:20:46 (3443406): run_atlas exited; CPU time 17902.816947
20:20:46 (3443406): called boinc_finish(0)

</stderr_txt>
]]>

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