Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:44:21 (1377493): wrapper (7.7.26015): starting
21:44:21 (1377493): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 21:44:21] Arguments: --nthreads 4
[2026-03-09 21:44:21] Threads: 4
[2026-03-09 21:44:21] Checking for CVMFS
[2026-03-09 21:44:21] No cvmfs_config command found, will try listing directly
[2026-03-09 21:44:21] CVMFS is ok
[2026-03-09 21:44:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 21:44:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 21:44:21] Further information can be found at the LHC@home message board.
[2026-03-09 21:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 21:44:21] Checking for apptainer binary...
[2026-03-09 21:44:21] which: no apptainer in ((null))
[2026-03-09 21:44:21] apptainer is not installed, using version from CVMFS
[2026-03-09 21:44:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 21:44:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-09 21:44:21] apptainer works
[2026-03-09 21:44:21] Set ATHENA_PROC_NUMBER=4
[2026-03-09 21:44:21] Set ATHENA_CORE_NUMBER=4
[2026-03-09 21:44:21] Starting ATLAS job with PandaID=7039136204
[2026-03-09 21:44:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 00:53:13]  *** The last 200 lines of the pilot log: ***
[2026-03-10 00:53:13] 2026-03-09 23:52:18,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,597 | INFO     | log transfer has been attempted: DONE
[2026-03-10 00:53:13] 2026-03-09 23:52:18,597 | INFO     | job 7039136204 has finished - writing final server update
[2026-03-10 00:53:13] 2026-03-09 23:52:18,598 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2037581/.job.ad'
[2026-03-10 00:53:13] 2026-03-09 23:52:18,598 | INFO     | total number of processed events: 400 (read)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,610 | INFO     | using path: /var/lib/boinc/var/slot20/slots/1/PanDA_Pilot-7039136204/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,611 | INFO     | extracted standard info from prmon json
[2026-03-10 00:53:13] 2026-03-09 23:52:18,611 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 00:53:13] 2026-03-09 23:52:18,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 00:53:13] 2026-03-09 23:52:18,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 00:53:13] 2026-03-09 23:52:18,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 00:53:13] 2026-03-09 23:52:18,615 | INFO     | fitting pss+swap vs Time
[2026-03-10 00:53:13] 2026-03-09 23:52:18,616 | INFO     | sum of square deviations: 1931608310.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,617 | INFO     | sum of deviations: 21693449276.000008
[2026-03-10 00:53:13] 2026-03-09 23:52:18,617 | INFO     | mean x: 1773094691.5
[2026-03-10 00:53:13] 2026-03-09 23:52:18,617 | INFO     | mean y: 2310248.663043478
[2026-03-10 00:53:13] 2026-03-09 23:52:18,617 | INFO     | intersect: -19910908985.52017
[2026-03-10 00:53:13] 2026-03-09 23:52:18,618 | INFO     | chi2: 1.3969449236733456
[2026-03-10 00:53:13] 2026-03-09 23:52:18,618 | INFO     | sum of square deviations: 1778377530.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,619 | INFO     | sum of deviations: 21055035293.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,619 | INFO     | mean x: 1773094539.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,619 | INFO     | mean y: 2309613.0782122905
[2026-03-10 00:53:13] 2026-03-09 23:52:18,619 | INFO     | intersect: -20990177902.47793
[2026-03-10 00:53:13] 2026-03-09 23:52:18,620 | INFO     | chi2: 1.3979542196845551
[2026-03-10 00:53:13] 2026-03-09 23:52:18,620 | INFO     | current chi2=1.3979542196845551 (change=-0.07225023650578727 %)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,620 | INFO     | right removable region: 178
[2026-03-10 00:53:13] 2026-03-09 23:52:18,620 | INFO     | sum of square deviations: 1778377530.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,621 | INFO     | sum of deviations: -3161141878.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,622 | INFO     | mean x: 1773094844.0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,622 | INFO     | mean y: 2334661.815642458
[2026-03-10 00:53:13] 2026-03-09 23:52:18,622 | INFO     | intersect: 3154086340.231348
[2026-03-10 00:53:13] 2026-03-09 23:52:18,622 | INFO     | chi2: 0.010728206080117255
[2026-03-10 00:53:13] 2026-03-09 23:52:18,622 | INFO     | current chi2=0.010728206080117255 (change=99.23202368981686 %)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,623 | INFO     | sum of square deviations: 1633472487.5
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | sum of deviations: -3177327038.4999995
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | mean x: 1773094996.5
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | mean y: 2334661.132183908
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | intersect: 3451246545.0603867
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | chi2: 0.008376463087977138
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | current chi2=0.008376463087977138 (change=21.921120591620973 %)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,624 | INFO     | left removable region: 20
[2026-03-10 00:53:13] 2026-03-09 23:52:18,625 | INFO     | sum of square deviations: 1223016419.5
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | sum of deviations: -755693802.9999998
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | mean x: 1773095118.5
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | mean y: 2331782.2278481014
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | intersect: 1097915595.9985514
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | chi2: 0.005220171804095498
[2026-03-10 00:53:13] 2026-03-09 23:52:18,626 | INFO     | current memory leak: -0.62 B/s (using 158 data points, chi2=0.01)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,627 | INFO     | could have reported an average CPU frequency of 2506 MHz (10 samples)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,627 | INFO     | ..............................
[2026-03-10 00:53:13] 2026-03-09 23:52:18,627 | INFO     | . Timing measurements:
[2026-03-10 00:53:13] 2026-03-09 23:52:18,627 | INFO     | . get job = 0 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . initial setup = 8 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . payload setup = 9 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . stage-in = 0 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . payload execution = 11232 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . stage-out = 1 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | . log creation = 0 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,628 | INFO     | ..............................
[2026-03-10 00:53:13] 2026-03-09 23:52:18,724 | INFO     | 
[2026-03-10 00:53:13] 2026-03-09 23:52:18,724 | INFO     | job summary report
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | --------------------------------------------------
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | PanDA job id: 7039136204
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | task id: 48955015
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | errors: (none)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | pilot state: finished 
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | transexitcode: 0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | exeerrorcode: 0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | exeerrordiag: 
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | exitcode: 0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | exitmsg: OK
[2026-03-10 00:53:13] 2026-03-09 23:52:18,725 | INFO     | cpuconsumptiontime: 42573 s
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | nevents: 400
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | neventsw: 0
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | pid: 1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | pgrp: 1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | corecount: 4
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | event service: False
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | sizes: {0: 2279142, 1: 2280271, 2: 2280271, 11245: 2309500, 11246: 2309499, 11248: 2318759, 11249: 2318897}
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | --------------------------------------------------
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | 
[2026-03-10 00:53:13] 2026-03-09 23:52:18,726 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/1
[2026-03-10 00:53:13] 2026-03-09 23:52:18,750 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,750 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,750 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | job 7039136204 has completed (purged errors)
[2026-03-10 00:53:13] 2026-03-09 23:52:18,752 | INFO     | overall cleanup function is called
[2026-03-10 00:53:13] 2026-03-09 23:52:19,761 | INFO     | --- collectZombieJob: --- 10, [1386735]
[2026-03-10 00:53:13] 2026-03-09 23:52:19,761 | INFO     | zombie collector waiting for pid 1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:19,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 00:53:13] 2026-03-09 23:52:19,761 | INFO     | collected zombie processes
[2026-03-10 00:53:13] 2026-03-09 23:52:19,761 | INFO     | will attempt to kill all subprocesses of pid=1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:20,125 | INFO     | process IDs to be killed: [1386735] (in reverse order)
[2026-03-10 00:53:13] 2026-03-09 23:52:20,259 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 00:53:13] 2026-03-09 23:52:20,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 00:53:13] 2026-03-09 23:52:20,270 | INFO     | did not find any defunct processes belonging to 1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:20,280 | INFO     | did not find any defunct processes belonging to 1386735
[2026-03-10 00:53:13] 2026-03-09 23:52:20,280 | INFO     | ready for new job
[2026-03-10 00:53:13] 2026-03-09 23:52:20,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 00:53:13] 2026-03-09 23:52:20,283 | INFO     | **************************************
[2026-03-10 00:53:13] 2026-03-09 23:52:20,283 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 00:53:13] 2026-03-09 23:52:20,283 | INFO     | **************************************
[2026-03-10 00:53:13] 2026-03-09 23:52:20,283 | INFO     | 
[2026-03-10 00:53:13] 2026-03-09 23:52:20,287 | INFO     | architecture information:
[2026-03-10 00:53:13] 2026-03-09 23:52:20,287 | INFO     | executing command: cat /etc/os-release
[2026-03-10 00:53:13] 2026-03-09 23:52:20,304 | INFO     | cat /etc/os-release:
[2026-03-10 00:53:13] NAME="CentOS Linux"
[2026-03-10 00:53:13] VERSION="7 (Core)"
[2026-03-10 00:53:13] ID="centos"
[2026-03-10 00:53:13] ID_LIKE="rhel fedora"
[2026-03-10 00:53:13] VERSION_ID="7"
[2026-03-10 00:53:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 00:53:13] ANSI_COLOR="0;31"
[2026-03-10 00:53:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 00:53:13] HOME_URL="https://www.centos.org/"
[2026-03-10 00:53:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 00:53:13] 
[2026-03-10 00:53:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 00:53:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 00:53:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 00:53:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 00:53:13] 
[2026-03-10 00:53:13] 2026-03-09 23:52:20,304 | INFO     | **************************************
[2026-03-10 00:53:13] 2026-03-09 23:52:20,807 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/1
[2026-03-10 00:53:13] 2026-03-09 23:52:20,827 | INFO     | sufficient remaining disk space (20051918848 B)
[2026-03-10 00:53:13] 2026-03-09 23:52:20,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 00:53:13] 2026-03-09 23:52:20,828 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 00:53:13] 2026-03-09 23:52:20,828 | INFO     | update_server=False
[2026-03-10 00:53:13] 2026-03-09 23:52:20,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 00:53:13] 2026-03-09 23:52:20,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 00:53:13] 2026-03-09 23:52:21,074 | INFO     | all job control threads have been joined
[2026-03-10 00:53:13] 2026-03-09 23:52:21,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 00:53:13] 2026-03-09 23:52:21,564 | INFO     | all data control threads have been joined
[2026-03-10 00:53:13] 2026-03-09 23:52:21,775 | INFO     | all payload control threads have been joined
[2026-03-10 00:53:13] 2026-03-09 23:52:21,834 | INFO     | [job] retrieve thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:21,877 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:21,951 | INFO     | [payload] failed_post thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:22,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:22,079 | INFO     | [job] control thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:22,096 | WARNING  | process 1386735 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 00:53:13] 2026-03-09 23:52:22,353 | INFO     | using path: /var/lib/boinc/var/slot20/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 00:53:13] 2026-03-09 23:52:22,569 | INFO     | [data] control thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:22,660 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:22,710 | INFO     | number of running child processes to parent process 1386735: 1
[2026-03-10 00:53:13] 2026-03-09 23:52:22,710 | INFO     | maximum number of monitored processes: 6
[2026-03-10 00:53:13] 2026-03-09 23:52:22,710 | INFO     | aborting job monitoring since job object (job id=7039136204) has expired
[2026-03-10 00:53:13] 2026-03-09 23:52:22,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 00:53:13] 2026-03-09 23:52:22,711 | INFO     | will abort loop
[2026-03-10 00:53:13] 2026-03-09 23:52:22,781 | INFO     | [payload] control thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,123 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,136 | INFO     | [payload] validate_post thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,153 | INFO     | [job] validate thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,203 | INFO     | [data] copytool_in thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,292 | INFO     | [data] copytool_out thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,716 | INFO     | [job] job monitor thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:23,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 00:53:13] 2026-03-09 23:52:24,735 | INFO     | [job] queue monitor thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:24,833 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 00:53:13] 2026-03-09 23:52:49,802 | INFO     | 11259s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-10 00:53:13] 2026-03-09 23:52:51,218 | INFO     | PID=1381979 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 00:53:13] 2026-03-09 23:52:51,218 | INFO     | .. there are 15 such processes running
[2026-03-10 00:53:13] 2026-03-09 23:52:51,219 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 00:53:13] 2026-03-09 23:52:51,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 00:53:13] 2026-03-09 23:52:51,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 00:53:13] 2026-03-09 23:53:06,619 | INFO     | [monitor] cgroup control has ended
[2026-03-10 00:53:13] 2026-03-09 23:53:07,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22653790676800)>', '<ExcThread(monitor, started 22653550470912)>']
[2026-03-10 00:53:13] 2026-03-09 23:53:08,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 00:53:13] 2026-03-09 23:53:08,303 | INFO     | [monitor] control thread has ended
[2026-03-10 00:53:13] 2026-03-09 23:53:12,897 | INFO     | all workflow threads have been joined
[2026-03-10 00:53:13] 2026-03-09 23:53:12,897 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 00:53:13] 2026-03-09 23:53:12,897 | INFO     | traces error code: 0
[2026-03-10 00:53:13] 2026-03-09 23:53:12,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 00:53:13] 2026-03-09 23:53:13,095 [wrapper] ==== pilot stdout END ====
[2026-03-10 00:53:13] 2026-03-09 23:53:13,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 00:53:13] 2026-03-09 23:53:13,102 [wrapper] pilotpid: 1381979
[2026-03-10 00:53:13] 2026-03-09 23:53:13,105 [wrapper] Pilot exit status: 0
[2026-03-10 00:53:13] 2026-03-09 23:53:13,118 [wrapper] pandaids: 7039136204
[2026-03-10 00:53:13] 2026-03-09 23:53:13,192 [wrapper] cleanup supervisor_pilot 1636145 1381980
[2026-03-10 00:53:13] 2026-03-09 23:53:13,196 [wrapper] Test setup, not cleaning
[2026-03-10 00:53:13] 2026-03-09 23:53:13,199 [wrapper] apfmon messages muted
[2026-03-10 00:53:13] 2026-03-09 23:53:13,202 [wrapper] ==== wrapper stdout END ====
[2026-03-10 00:53:13] 2026-03-09 23:53:13,205 [wrapper] ==== wrapper stderr END ====
[2026-03-10 00:53:13]  *** Error codes and diagnostics ***
[2026-03-10 00:53:13]     "exeErrorCode": 0,
[2026-03-10 00:53:13]     "exeErrorDiag": "",
[2026-03-10 00:53:13]     "pilotErrorCode": 0,
[2026-03-10 00:53:13]     "pilotErrorDiag": "",
[2026-03-10 00:53:13]  *** Listing of results directory ***
[2026-03-10 00:53:13] total 626292
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc    584627 Mar  7 16:36 pilot3.tar.gz
[2026-03-10 00:53:13] -rwx------. 1 boinc boinc     36322 Mar  7 16:39 runpilot2-wrapper.sh
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc      5111 Mar  7 16:42 queuedata.json
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc       100 Mar  9 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 00:53:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 21:44 run_atlas
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc       105 Mar  9 21:44 job.xml
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc      6563 Mar  9 21:44 init_data.xml
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc 442742936 Mar  9 21:44 EVNT.46701403._002199.pool.root.1
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:44 start_atlas.sh
[2026-03-10 00:53:13] drwxrwx--x. 2 boinc boinc      4096 Mar  9 21:44 shared
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc    597955 Mar  9 21:44 input.tar.gz
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc         0 Mar  9 21:44 boinc_lockfile
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc      2569 Mar  9 21:44 pandaJob.out
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc   1002738 Mar  9 21:44 agis_schedconf.cvmfs.json
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc       451 Mar  9 21:44 workernode_map.json
[2026-03-10 00:53:13] drwx------. 5 boinc boinc      4096 Mar  9 21:44 pilot3
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc 190726725 Mar 10 00:51 HITS.48955015._007519.pool.root.1
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc       531 Mar 10 00:51 boinc_task_state.xml
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc      1048 Mar 10 00:52 memory_monitor_summary.json
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc   1511578 Mar 10 00:52 agis_ddmendpoints.agis.ALL.json
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc    366783 Mar 10 00:52 log.48955015._007519.job.log.tgz.1
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc      6419 Mar 10 00:52 heartbeat.json
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc        95 Mar 10 00:52 pilot_heartbeat.json
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc      8192 Mar 10 00:52 boinc_mmap_file
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc        28 Mar 10 00:52 wrapper_checkpoint.txt
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc      5477 Mar 10 00:53 pilotlog.txt
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc   1592826 Mar 10 00:53 log.48955015._007519.job.log.1
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc       357 Mar 10 00:53 output.list
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc       620 Mar 10 00:53 runtime_log
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc   1976320 Mar 10 00:53 result.tar.gz
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc       665 Mar 10 00:53 sQIKDmwv8I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGNWLDmt566Qo.diag
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc      9205 Mar 10 00:53 runtime_log.err
[2026-03-10 00:53:13] -rw-r--r--. 1 boinc boinc     21171 Mar 10 00:53 stderr.txt
[2026-03-10 00:53:13] HITS file was successfully produced:
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc 190726725 Mar 10 00:51 shared/HITS.pool.root.1
[2026-03-10 00:53:13]  *** Contents of shared directory: ***
[2026-03-10 00:53:13] total 621168
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc 442742936 Mar  9 21:44 ATLAS.root_0
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:44 start_atlas.sh
[2026-03-10 00:53:13] -rw-r--r--. 2 boinc boinc    597955 Mar  9 21:44 input.tar.gz
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc 190726725 Mar 10 00:51 HITS.pool.root.1
[2026-03-10 00:53:13] -rw-------. 1 boinc boinc   1976320 Mar 10 00:53 result.tar.gz
00:53:14 (1377493): run_atlas exited; CPU time 42997.743947
00:53:14 (1377493): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN