Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:26 (1226974): wrapper (7.7.26015): starting
15:12:26 (1226974): wrapper: running run_atlas (--nthreads 9)
[2026-03-07 15:12:26] Arguments: --nthreads 9
[2026-03-07 15:12:26] Threads: 9
[2026-03-07 15:12:26] Checking for CVMFS
[2026-03-07 15:12:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 15:12:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 15:12:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 15:12:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 15:12:27] 2.13.3.0 12497 175819 329668 157012 3 930 23811531 32935936 36929 16776704 0 942509568 99.515 1198022429 36417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-07 15:12:27] CVMFS is ok
[2026-03-07 15:12:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 15:12:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 15:12:27] Further information can be found at the LHC@home message board.
[2026-03-07 15:12:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 15:12:27] Checking for apptainer binary...
[2026-03-07 15:12:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 15:12:27] Running /usr/bin/apptainer --version
[2026-03-07 15:12:27] apptainer version 1.4.5-2.el9
[2026-03-07 15:12:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 15:12:28] c7-7-35.aglt2.org
[2026-03-07 15:12:28] apptainer works
[2026-03-07 15:12:28] Set ATHENA_PROC_NUMBER=9
[2026-03-07 15:12:28] Set ATHENA_CORE_NUMBER=9
[2026-03-07 15:12:28] Starting ATLAS job with PandaID=7039062857
[2026-03-07 15:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:51:38]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:51:38]  is_altstaged=None
[2026-03-07 16:51:38]  is_tar=False
[2026-03-07 16:51:38]  lfn=log.48955006._015834.job.log.tgz.1
[2026-03-07 16:51:38]  mtime=0
[2026-03-07 16:51:38]  protocol_id=None
[2026-03-07 16:51:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 16:51:38]  replicas=None
[2026-03-07 16:51:38]  scope=mc23_13p6TeV
[2026-03-07 16:51:38]  status=None
[2026-03-07 16:51:38]  status_code=0
[2026-03-07 16:51:38]  storage_token=
[2026-03-07 16:51:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7039062857/log.48955006._015834.job.log.tgz.1
[2026-03-07 16:51:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/ca/log.48955006._015834.job.log.tgz.1
[2026-03-07 16:51:38]  workdir=None
[2026-03-07 16:51:38] ]
[2026-03-07 16:51:38] 2026-03-07 21:50:35,687 | INFO     | transferring file log.48955006._015834.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7039062857/log.48955006._015834.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-07 16:51:38] 2026-03-07 21:50:35,687 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7039062857/log.48955006._015834.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._015834.job
[2026-03-07 16:51:38] 2026-03-07 21:50:35,790 | INFO     | adding to output.list: log.48955006._015834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/ca/log.48955006._015834.job.log.tg
[2026-03-07 16:51:38] 2026-03-07 21:50:35,791 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 16:51:38] 2026-03-07 21:50:35,791 | INFO     | summary of transferred files:
[2026-03-07 16:51:38] 2026-03-07 21:50:35,791 | INFO     |  -- lfn=log.48955006._015834.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 16:51:38] 2026-03-07 21:50:35,791 | INFO     | stage-out finished correctly
[2026-03-07 16:51:38] 2026-03-07 21:50:37,007 | WARNING  | process 1239639 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 16:51:38] 2026-03-07 21:50:37,008 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7039062857/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:51:38] 2026-03-07 21:50:37,384 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 16:51:38] 2026-03-07 21:50:37,506 | INFO     | time since job start (5837s) is within the limit (349056.0s)
[2026-03-07 16:51:38] 2026-03-07 21:50:38,880 | INFO     | number of running child processes to parent process 1239639: 1
[2026-03-07 16:51:38] 2026-03-07 21:50:38,880 | INFO     | maximum number of monitored processes: 6
[2026-03-07 16:51:38] 2026-03-07 21:50:39,379 | INFO     | job 7039062857 has state=finished
[2026-03-07 16:51:38] 2026-03-07 21:50:39,379 | INFO     | preparing for final server update for job 7039062857 in state='finished'
[2026-03-07 16:51:38] 2026-03-07 21:50:39,379 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7039062857/jobReport.json
[2026-03-07 16:51:38] 2026-03-07 21:50:39,382 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-07 16:51:38] 2026-03-07 21:50:39,382 | INFO     | this job has now completed (state=finished)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,382 | INFO     | log transfer has been attempted: DONE
[2026-03-07 16:51:38] 2026-03-07 21:50:39,382 | INFO     | job 7039062857 has finished - writing final server update
[2026-03-07 16:51:38] 2026-03-07 21:50:39,383 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7039062857/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,428 | INFO     | extracted standard info from prmon json
[2026-03-07 16:51:38] 2026-03-07 21:50:39,428 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:51:38] 2026-03-07 21:50:39,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:51:38] 2026-03-07 21:50:39,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:51:38] 2026-03-07 21:50:39,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:51:38] 2026-03-07 21:50:39,430 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | sum of square deviations: 211321274.0795459
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | sum of deviations: 445291656.4204553
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | mean x: 1772917404.6477273
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | mean y: 2567519.852272727
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | intersect: -3733286010.5171747
[2026-03-07 16:51:38] 2026-03-07 21:50:39,431 | INFO     | chi2: 0.06166523642122116
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | current memory leak: 2.11 B/s (using 88 data points, chi2=0.06)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | could have reported an average CPU frequency of 2995 MHz (7 samples)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | ..............................
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . Timing measurements:
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . get job = 0 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . initial setup = 18 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . payload setup = 22 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . stage-in = 0 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . payload execution = 5790 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . stage-out = 4 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | . log creation = 0 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,432 | INFO     | ..............................
[2026-03-07 16:51:38] 2026-03-07 21:50:39,510 | INFO     | 
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | job summary report
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | --------------------------------------------------
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | PanDA job id: 7039062857
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | task id: 48955006
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | errors: (none)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | pilot state: finished 
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | transexitcode: 0
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | exeerrorcode: 0
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | exeerrordiag: 
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | exitcode: 0
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | exitmsg: OK
[2026-03-07 16:51:38] 2026-03-07 21:50:39,511 | INFO     | cpuconsumptiontime: 31300 s
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | nevents: 400
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | neventsw: 0
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | pid: 1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | pgrp: 1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | corecount: 9
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | event service: False
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | sizes: {0: 2295372, 1: 2295400, 2: 2295861, 13: 2295861, 5817: 2322670, 5818: 2322669, 5823: 2331851, 5824: 2331907, 5826: 2332101}
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | --------------------------------------------------
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | 
[2026-03-07 16:51:38] 2026-03-07 21:50:39,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-07 16:51:38] 2026-03-07 21:50:39,537 | INFO     | time since job start (5839s) is within the limit (349056.0s)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,539 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,539 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | job 7039062857 has completed (purged errors)
[2026-03-07 16:51:38] 2026-03-07 21:50:39,541 | INFO     | overall cleanup function is called
[2026-03-07 16:51:38] 2026-03-07 21:50:40,551 | INFO     | --- collectZombieJob: --- 10, [1239639]
[2026-03-07 16:51:38] 2026-03-07 21:50:40,551 | INFO     | zombie collector waiting for pid 1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:40,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:51:38] 2026-03-07 21:50:40,551 | INFO     | collected zombie processes
[2026-03-07 16:51:38] 2026-03-07 21:50:40,551 | INFO     | will attempt to kill all subprocesses of pid=1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:42,158 | INFO     | process IDs to be killed: [1239639] (in reverse order)
[2026-03-07 16:51:38] 2026-03-07 21:50:42,564 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:51:38] 2026-03-07 21:50:42,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:51:38] 2026-03-07 21:50:42,746 | INFO     | did not find any defunct processes belonging to 1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:42,831 | INFO     | did not find any defunct processes belonging to 1239639
[2026-03-07 16:51:38] 2026-03-07 21:50:42,832 | INFO     | ready for new job
[2026-03-07 16:51:38] 2026-03-07 21:50:42,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:51:38] 2026-03-07 21:50:42,838 | INFO     | **************************************
[2026-03-07 16:51:38] 2026-03-07 21:50:42,838 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:51:38] 2026-03-07 21:50:42,838 | INFO     | **************************************
[2026-03-07 16:51:38] 2026-03-07 21:50:42,838 | INFO     | 
[2026-03-07 16:51:38] 2026-03-07 21:50:42,848 | INFO     | architecture information:
[2026-03-07 16:51:38] 2026-03-07 21:50:42,858 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:51:38] 2026-03-07 21:50:42,955 | INFO     | cat /etc/os-release:
[2026-03-07 16:51:38] NAME="CentOS Linux"
[2026-03-07 16:51:38] VERSION="7 (Core)"
[2026-03-07 16:51:38] ID="centos"
[2026-03-07 16:51:38] ID_LIKE="rhel fedora"
[2026-03-07 16:51:38] VERSION_ID="7"
[2026-03-07 16:51:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:51:38] ANSI_COLOR="0;31"
[2026-03-07 16:51:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:51:38] HOME_URL="https://www.centos.org/"
[2026-03-07 16:51:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:51:38] 
[2026-03-07 16:51:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:51:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:51:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:51:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:51:38] 
[2026-03-07 16:51:38] 2026-03-07 21:50:42,955 | INFO     | **************************************
[2026-03-07 16:51:38] 2026-03-07 21:50:43,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-07 16:51:38] 2026-03-07 21:50:43,540 | INFO     | sufficient remaining disk space (70598524928 B)
[2026-03-07 16:51:38] 2026-03-07 21:50:43,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:51:38] 2026-03-07 21:50:43,568 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:51:38] 2026-03-07 21:50:43,568 | INFO     | update_server=False
[2026-03-07 16:51:38] 2026-03-07 21:50:43,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:51:38] 2026-03-07 21:50:43,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:51:38] 2026-03-07 21:50:43,924 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 16:51:38] 2026-03-07 21:50:43,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 16:51:38] 2026-03-07 21:50:43,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:51:38] 2026-03-07 21:50:43,924 | INFO     | will abort loop
[2026-03-07 16:51:38] 2026-03-07 21:50:44,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:51:38] 2026-03-07 21:50:44,458 | INFO     | all payload control threads have been joined
[2026-03-07 16:51:38] 2026-03-07 21:50:44,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:51:38] 2026-03-07 21:50:44,574 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:44,613 | INFO     | all job control threads have been joined
[2026-03-07 16:51:38] 2026-03-07 21:50:44,660 | INFO     | all data control threads have been joined
[2026-03-07 16:51:38] 2026-03-07 21:50:44,680 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:44,782 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:44,930 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:44,975 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,456 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,456 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,464 | INFO     | [payload] control thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,520 | INFO     | [job] validate thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,533 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,550 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,550 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,620 | INFO     | [job] control thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:45,666 | INFO     | [data] control thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:46,095 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:50:47,604 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:51:38] 2026-03-07 21:51:15,580 | INFO     | PID=1233464 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 16:51:38] 2026-03-07 21:51:15,581 | INFO     | .. there are 47 such processes running
[2026-03-07 16:51:38] 2026-03-07 21:51:15,585 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:51:38] 2026-03-07 21:51:15,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:51:38] 2026-03-07 21:51:15,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:51:38] 2026-03-07 21:51:29,888 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:51:38] 2026-03-07 21:51:30,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728303904576)>', '<ExcThread(monitor, started 139727667705600)>']
[2026-03-07 16:51:38] 2026-03-07 21:51:31,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:51:38] 2026-03-07 21:51:31,681 | INFO     | [monitor] control thread has ended
[2026-03-07 16:51:38] 2026-03-07 21:51:35,867 | INFO     | all workflow threads have been joined
[2026-03-07 16:51:38] 2026-03-07 21:51:35,867 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:51:38] 2026-03-07 21:51:35,868 | INFO     | traces error code: 0
[2026-03-07 16:51:38] 2026-03-07 21:51:35,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:51:38] 2026-03-07 21:51:37,758 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:51:38] 2026-03-07 21:51:37,781 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:51:38] 2026-03-07 21:51:37,811 [wrapper] pilotpid: 1233464
[2026-03-07 16:51:38] 2026-03-07 21:51:37,844 [wrapper] Pilot exit status: 0
[2026-03-07 16:51:38] 2026-03-07 21:51:37,968 [wrapper] pandaids: 7039062857
[2026-03-07 16:51:38] 2026-03-07 21:51:38,310 [wrapper] cleanup supervisor_pilot 1700363 1233465
[2026-03-07 16:51:38] 2026-03-07 21:51:38,332 [wrapper] Test setup, not cleaning
[2026-03-07 16:51:38] 2026-03-07 21:51:38,339 [wrapper] apfmon messages muted
[2026-03-07 16:51:38] 2026-03-07 21:51:38,395 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:51:38] 2026-03-07 21:51:38,418 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:51:38]  *** Error codes and diagnostics ***
[2026-03-07 16:51:38]     "exeErrorCode": 0,
[2026-03-07 16:51:38]     "exeErrorDiag": "",
[2026-03-07 16:51:38]     "pilotErrorCode": 0,
[2026-03-07 16:51:38]     "pilotErrorDiag": "",
[2026-03-07 16:51:38]  *** Listing of results directory ***
[2026-03-07 16:51:38] total 609064
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 04:08 pilot3.tar.gz
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 04:40 queuedata.json
[2026-03-07 16:51:38] -rwx------. 1 boincer umatlas     36322 Mar  7 04:41 runpilot2-wrapper.sh
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas       100 Mar  7 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:51:38] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  7 15:12 run_atlas
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas       105 Mar  7 15:12 job.xml
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas 434588860 Mar  7 15:12 EVNT.46701403._000317.pool.root.1
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 15:12 start_atlas.sh
[2026-03-07 16:51:38] drwxrwx--x. 2 boincer umatlas      4096 Mar  7 15:12 shared
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas    597960 Mar  7 15:12 input.tar.gz
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas         0 Mar  7 15:12 boinc_lockfile
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas      2564 Mar  7 15:12 pandaJob.out
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas        57 Mar  7 15:12 setup.sh.local
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas    999177 Mar  7 15:13 agis_schedconf.cvmfs.json
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas   1521291 Mar  7 15:13 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas       428 Mar  7 15:13 workernode_map.json
[2026-03-07 16:51:38] drwx------. 5 boincer umatlas      4096 Mar  7 15:13 pilot3
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas      6946 Mar  7 16:47 init_data.xml
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas 182850433 Mar  7 16:49 HITS.48955006._015834.pool.root.1
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas       530 Mar  7 16:49 boinc_task_state.xml
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas      1040 Mar  7 16:50 memory_monitor_summary.json
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas    378560 Mar  7 16:50 log.48955006._015834.job.log.tgz.1
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas      6356 Mar  7 16:50 heartbeat.json
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas        95 Mar  7 16:51 pilot_heartbeat.json
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas      8192 Mar  7 16:51 boinc_mmap_file
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas        27 Mar  7 16:51 wrapper_checkpoint.txt
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas      5006 Mar  7 16:51 pilotlog.txt
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas    773482 Mar  7 16:51 log.48955006._015834.job.log.1
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas       357 Mar  7 16:51 output.list
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas       620 Mar  7 16:51 runtime_log
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas   1167360 Mar  7 16:51 result.tar.gz
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas       656 Mar  7 16:51 kFLLDmHL3I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmy8SLDm9NVxjn.diag
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas      9336 Mar  7 16:51 runtime_log.err
[2026-03-07 16:51:38] -rw-r--r--. 1 boincer umatlas     21549 Mar  7 16:51 stderr.txt
[2026-03-07 16:51:38] HITS file was successfully produced:
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas 182850433 Mar  7 16:49 shared/HITS.pool.root.1
[2026-03-07 16:51:38]  *** Contents of shared directory: ***
[2026-03-07 16:51:38] total 604720
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas 434588860 Mar  7 15:12 ATLAS.root_0
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 15:12 start_atlas.sh
[2026-03-07 16:51:38] -rw-r--r--. 2 boincer umatlas    597960 Mar  7 15:12 input.tar.gz
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas 182850433 Mar  7 16:49 HITS.pool.root.1
[2026-03-07 16:51:38] -rw-------. 1 boincer umatlas   1167360 Mar  7 16:51 result.tar.gz
16:51:40 (1226974): run_atlas exited; CPU time 31556.105955
16:51:40 (1226974): called boinc_finish(0)

</stderr_txt>
]]>

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