Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:23 (4100406): wrapper (7.7.26015): starting
01:48:23 (4100406): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 01:48:23] Arguments: --nthreads 4
[2026-03-09 01:48:23] Threads: 4
[2026-03-09 01:48:23] Checking for CVMFS
[2026-03-09 01:48:23] No cvmfs_config command found, will try listing directly
[2026-03-09 01:48:23] CVMFS is ok
[2026-03-09 01:48:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 01:48:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 01:48:23] Further information can be found at the LHC@home message board.
[2026-03-09 01:48:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 01:48:23] Checking for apptainer binary...
[2026-03-09 01:48:23] which: no apptainer in ((null))
[2026-03-09 01:48:23] apptainer is not installed, using version from CVMFS
[2026-03-09 01:48:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 01:48:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-09 01:48:23] apptainer works
[2026-03-09 01:48:23] Set ATHENA_PROC_NUMBER=4
[2026-03-09 01:48:23] Set ATHENA_CORE_NUMBER=4
[2026-03-09 01:48:23] Starting ATLAS job with PandaID=7039149491
[2026-03-09 01:48:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 03:08:50]  *** The last 200 lines of the pilot log: ***
[2026-03-09 03:08:50]  is_altstaged=None
[2026-03-09 03:08:50]  is_tar=False
[2026-03-09 03:08:50]  lfn=log.48955006._017016.job.log.tgz.1
[2026-03-09 03:08:50]  mtime=0
[2026-03-09 03:08:50]  protocol_id=None
[2026-03-09 03:08:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 03:08:50]  replicas=None
[2026-03-09 03:08:50]  scope=mc23_13p6TeV
[2026-03-09 03:08:50]  status=None
[2026-03-09 03:08:50]  status_code=0
[2026-03-09 03:08:50]  storage_token=
[2026-03-09 03:08:50]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7039149491/log.48955006._017016.job.log.tgz.1
[2026-03-09 03:08:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/15/log.48955006._017016.job.log.tgz.1
[2026-03-09 03:08:50]  workdir=None
[2026-03-09 03:08:50] ]
[2026-03-09 03:08:50] 2026-03-09 02:07:54,873 | INFO     | transferring file log.48955006._017016.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7039149491/log.48955006._017016.job.log.tgz.1 to /var/lib/
[2026-03-09 03:08:50] 2026-03-09 02:07:54,873 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7039149491/log.48955006._017016.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-09 03:08:50] 2026-03-09 02:07:54,878 | INFO     | time since job start (4758s) is within the limit (349056.0s)
[2026-03-09 03:08:50] 2026-03-09 02:07:54,891 | INFO     | adding to output.list: log.48955006._017016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/15/log.48955006._017016.job.log.tg
[2026-03-09 03:08:50] 2026-03-09 02:07:54,891 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 03:08:50] 2026-03-09 02:07:54,891 | INFO     | summary of transferred files:
[2026-03-09 03:08:50] 2026-03-09 02:07:54,891 | INFO     |  -- lfn=log.48955006._017016.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 03:08:50] 2026-03-09 02:07:54,891 | INFO     | stage-out finished correctly
[2026-03-09 03:08:50] 2026-03-09 02:07:56,368 | INFO     | monitor loop #343: job 0:7039149491 is in state 'finished'
[2026-03-09 03:08:50] 2026-03-09 02:07:56,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 03:08:50] 2026-03-09 02:07:56,883 | INFO     | time since job start (4760s) is within the limit (349056.0s)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,595 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 03:08:50] 2026-03-09 02:07:57,645 | INFO     | job 7039149491 has state=finished
[2026-03-09 03:08:50] 2026-03-09 02:07:57,645 | INFO     | preparing for final server update for job 7039149491 in state='finished'
[2026-03-09 03:08:50] 2026-03-09 02:07:57,646 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7039149491/jobReport.json
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | INFO     | this job has now completed (state=finished)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | INFO     | log transfer has been attempted: DONE
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | INFO     | job 7039149491 has finished - writing final server update
[2026-03-09 03:08:50] 2026-03-09 02:07:57,648 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_538145/.job.ad'
[2026-03-09 03:08:50] 2026-03-09 02:07:57,649 | INFO     | total number of processed events: 400 (read)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,667 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7039149491/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,668 | INFO     | extracted standard info from prmon json
[2026-03-09 03:08:50] 2026-03-09 02:07:57,668 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 03:08:50] 2026-03-09 02:07:57,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 03:08:50] 2026-03-09 02:07:57,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 03:08:50] 2026-03-09 02:07:57,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 03:08:50] 2026-03-09 02:07:57,669 | INFO     | fitting pss+swap vs Time
[2026-03-09 03:08:50] 2026-03-09 02:07:57,669 | INFO     | sum of square deviations: 110960220.0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | sum of deviations: 167276762.0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | mean x: 1773019776.0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | mean y: 2326587.1549295774
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | intersect: -2670568321.4100075
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | chi2: 0.00024380852266553307
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | current memory leak: 1.51 B/s (using 71 data points, chi2=0.00)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | could have reported an average CPU frequency of 3593 MHz (6 samples)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | ..............................
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . Timing measurements:
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . get job = 0 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . initial setup = 4 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . payload setup = 4 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . stage-in = 0 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . payload execution = 4738 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . stage-out = 0 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | . log creation = 0 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,670 | INFO     | ..............................
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | 
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | job summary report
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | --------------------------------------------------
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | PanDA job id: 7039149491
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | task id: 48955006
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | errors: (none)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | pilot state: finished 
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | transexitcode: 0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | exeerrorcode: 0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | exeerrordiag: 
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | exitcode: 0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | exitmsg: OK
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | cpuconsumptiontime: 18111 s
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | nevents: 400
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | neventsw: 0
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | pid: 4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | pgrp: 4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | corecount: 4
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | event service: False
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | sizes: {0: 2280240, 11: 2280240, 4746: 2306525, 4748: 2315547, 4750: 2315797}
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | --------------------------------------------------
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | 
[2026-03-09 03:08:50] 2026-03-09 02:07:57,811 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 03:08:50] 2026-03-09 02:07:57,839 | INFO     | job 7039149491 has completed (purged errors)
[2026-03-09 03:08:50] 2026-03-09 02:07:57,839 | INFO     | overall cleanup function is called
[2026-03-09 03:08:50] 2026-03-09 02:07:58,516 | INFO     | PID=4104977 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 03:08:50] 2026-03-09 02:07:58,516 | INFO     | .. there are 48 such processes running
[2026-03-09 03:08:50] 2026-03-09 02:07:58,845 | INFO     | --- collectZombieJob: --- 10, [4110806]
[2026-03-09 03:08:50] 2026-03-09 02:07:58,846 | INFO     | zombie collector waiting for pid 4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:58,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 03:08:50] 2026-03-09 02:07:58,846 | INFO     | collected zombie processes
[2026-03-09 03:08:50] 2026-03-09 02:07:58,846 | INFO     | will attempt to kill all subprocesses of pid=4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:59,354 | INFO     | process IDs to be killed: [4110806] (in reverse order)
[2026-03-09 03:08:50] 2026-03-09 02:07:59,617 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 03:08:50] 2026-03-09 02:07:59,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 03:08:50] 2026-03-09 02:07:59,655 | INFO     | did not find any defunct processes belonging to 4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:59,686 | INFO     | did not find any defunct processes belonging to 4110806
[2026-03-09 03:08:50] 2026-03-09 02:07:59,686 | INFO     | ready for new job
[2026-03-09 03:08:50] 2026-03-09 02:07:59,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 03:08:50] 2026-03-09 02:07:59,687 | INFO     | **************************************
[2026-03-09 03:08:50] 2026-03-09 02:07:59,687 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 03:08:50] 2026-03-09 02:07:59,687 | INFO     | **************************************
[2026-03-09 03:08:50] 2026-03-09 02:07:59,687 | INFO     | 
[2026-03-09 03:08:50] 2026-03-09 02:07:59,693 | INFO     | architecture information:
[2026-03-09 03:08:50] 2026-03-09 02:07:59,693 | INFO     | executing command: cat /etc/os-release
[2026-03-09 03:08:50] 2026-03-09 02:07:59,727 | INFO     | cat /etc/os-release:
[2026-03-09 03:08:50] NAME="CentOS Linux"
[2026-03-09 03:08:50] VERSION="7 (Core)"
[2026-03-09 03:08:50] ID="centos"
[2026-03-09 03:08:50] ID_LIKE="rhel fedora"
[2026-03-09 03:08:50] VERSION_ID="7"
[2026-03-09 03:08:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 03:08:50] ANSI_COLOR="0;31"
[2026-03-09 03:08:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 03:08:50] HOME_URL="https://www.centos.org/"
[2026-03-09 03:08:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 03:08:50] 
[2026-03-09 03:08:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 03:08:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 03:08:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 03:08:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 03:08:50] 
[2026-03-09 03:08:50] 2026-03-09 02:07:59,727 | INFO     | **************************************
[2026-03-09 03:08:50] 2026-03-09 02:08:00,230 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-09 03:08:50] 2026-03-09 02:08:00,251 | INFO     | sufficient remaining disk space (21321744384 B)
[2026-03-09 03:08:50] 2026-03-09 02:08:00,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 03:08:50] 2026-03-09 02:08:00,251 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 03:08:50] 2026-03-09 02:08:00,251 | INFO     | update_server=False
[2026-03-09 03:08:50] 2026-03-09 02:08:00,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 03:08:50] 2026-03-09 02:08:00,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:08:50] 2026-03-09 02:08:00,252 | INFO     | aborting loop
[2026-03-09 03:08:50] 2026-03-09 02:08:00,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 03:08:50] 2026-03-09 02:08:00,570 | INFO     | all data control threads have been joined
[2026-03-09 03:08:50] 2026-03-09 02:08:00,647 | INFO     | all payload control threads have been joined
[2026-03-09 03:08:50] 2026-03-09 02:08:00,763 | INFO     | all job control threads have been joined
[2026-03-09 03:08:50] 2026-03-09 02:08:01,257 | INFO     | [job] retrieve thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,257 | INFO     | [job] job monitor thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,576 | INFO     | [data] control thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,653 | INFO     | [payload] control thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,769 | INFO     | [job] control thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,852 | INFO     | [job] validate thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,905 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:01,922 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,092 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,256 | INFO     | [data] copytool_in thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,341 | INFO     | [payload] failed_post thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,455 | INFO     | [data] copytool_out thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,463 | INFO     | [payload] validate_post thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:02,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:08:50] 2026-03-09 02:08:03,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 03:08:50] 2026-03-09 02:08:03,738 | INFO     | [job] queue monitor thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:07,661 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:10,415 | INFO     | job.realtimelogging is not enabled
[2026-03-09 03:08:50] 2026-03-09 02:08:11,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 03:08:50] 2026-03-09 02:08:31,210 | INFO     | PID=4104977 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 03:08:50] 2026-03-09 02:08:31,211 | INFO     | .. there are 48 such processes running
[2026-03-09 03:08:50] 2026-03-09 02:08:31,211 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 03:08:50] 2026-03-09 02:08:31,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 03:08:50] 2026-03-09 02:08:31,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 03:08:50] 2026-03-09 02:08:43,596 | INFO     | [monitor] cgroup control has ended
[2026-03-09 03:08:50] 2026-03-09 02:08:44,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23151198242624)>', '<ExcThread(monitor, started 23150959273728)>']
[2026-03-09 03:08:50] 2026-03-09 02:08:45,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 03:08:50] 2026-03-09 02:08:45,292 | INFO     | [monitor] control thread has ended
[2026-03-09 03:08:50] 2026-03-09 02:08:49,898 | INFO     | all workflow threads have been joined
[2026-03-09 03:08:50] 2026-03-09 02:08:49,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 03:08:50] 2026-03-09 02:08:49,899 | INFO     | traces error code: 0
[2026-03-09 03:08:50] 2026-03-09 02:08:49,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 03:08:50] 2026-03-09 02:08:50,089 [wrapper] ==== pilot stdout END ====
[2026-03-09 03:08:50] 2026-03-09 02:08:50,092 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 03:08:50] 2026-03-09 02:08:50,094 [wrapper] pilotpid: 4104977
[2026-03-09 03:08:50] 2026-03-09 02:08:50,097 [wrapper] Pilot exit status: 0
[2026-03-09 03:08:50] 2026-03-09 02:08:50,110 [wrapper] pandaids: 7039149491
[2026-03-09 03:08:50] 2026-03-09 02:08:50,245 [wrapper] cleanup supervisor_pilot  614875 4104978
[2026-03-09 03:08:50] 2026-03-09 02:08:50,248 [wrapper] Test setup, not cleaning
[2026-03-09 03:08:50] 2026-03-09 02:08:50,251 [wrapper] apfmon messages muted
[2026-03-09 03:08:50] 2026-03-09 02:08:50,253 [wrapper] ==== wrapper stdout END ====
[2026-03-09 03:08:50] 2026-03-09 02:08:50,256 [wrapper] ==== wrapper stderr END ====
[2026-03-09 03:08:50]  *** Error codes and diagnostics ***
[2026-03-09 03:08:50]     "exeErrorCode": 0,
[2026-03-09 03:08:50]     "exeErrorDiag": "",
[2026-03-09 03:08:50]     "pilotErrorCode": 0,
[2026-03-09 03:08:50]     "pilotErrorDiag": "",
[2026-03-09 03:08:50]  *** Listing of results directory ***
[2026-03-09 03:08:50] total 606956
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc    584627 Mar  7 16:36 pilot3.tar.gz
[2026-03-09 03:08:50] -rwx------. 1 boinc boinc     36322 Mar  7 16:39 runpilot2-wrapper.sh
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc      5111 Mar  7 16:39 queuedata.json
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc       100 Mar  9 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 03:08:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 01:48 run_atlas
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc       105 Mar  9 01:48 job.xml
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc 439371146 Mar  9 01:48 EVNT.46701403._000341.pool.root.1
[2026-03-09 03:08:50] drwxrwx--x. 2 boinc boinc      4096 Mar  9 01:48 shared
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc    597945 Mar  9 01:48 input.tar.gz
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc      6708 Mar  9 01:48 init_data.xml
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc     15845 Mar  9 01:48 start_atlas.sh
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc         0 Mar  9 01:48 boinc_lockfile
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc      2563 Mar  9 01:48 pandaJob.out
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc    999108 Mar  9 01:48 agis_schedconf.cvmfs.json
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc   1511578 Mar  9 01:48 agis_ddmendpoints.agis.ALL.json
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc       443 Mar  9 01:48 workernode_map.json
[2026-03-09 03:08:50] drwx------. 5 boinc boinc      4096 Mar  9 01:48 pilot3
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc 176291329 Mar  9 03:07 HITS.48955006._017016.pool.root.1
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc       531 Mar  9 03:07 boinc_task_state.xml
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc      1028 Mar  9 03:07 memory_monitor_summary.json
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc        95 Mar  9 03:07 pilot_heartbeat.json
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc    267442 Mar  9 03:07 log.48955006._017016.job.log.tgz.1
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc      6352 Mar  9 03:07 heartbeat.json
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc      8192 Mar  9 03:08 boinc_mmap_file
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc        27 Mar  9 03:08 wrapper_checkpoint.txt
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc      4902 Mar  9 03:08 pilotlog.txt
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc    697556 Mar  9 03:08 log.48955006._017016.job.log.1
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc       357 Mar  9 03:08 output.list
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc       620 Mar  9 03:08 runtime_log
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc    983040 Mar  9 03:08 result.tar.gz
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc       662 Mar  9 03:08 sedKDmpv8I9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8wTLDm4YL13n.diag
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc      9221 Mar  9 03:08 runtime_log.err
[2026-03-09 03:08:50] -rw-r--r--. 1 boinc boinc     21399 Mar  9 03:08 stderr.txt
[2026-03-09 03:08:50] HITS file was successfully produced:
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc 176291329 Mar  9 03:07 shared/HITS.pool.root.1
[2026-03-09 03:08:50]  *** Contents of shared directory: ***
[2026-03-09 03:08:50] total 602804
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc 439371146 Mar  9 01:48 ATLAS.root_0
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc    597945 Mar  9 01:48 input.tar.gz
[2026-03-09 03:08:50] -rw-r--r--. 2 boinc boinc     15845 Mar  9 01:48 start_atlas.sh
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc 176291329 Mar  9 03:07 HITS.pool.root.1
[2026-03-09 03:08:50] -rw-------. 1 boinc boinc    983040 Mar  9 03:08 result.tar.gz
03:08:51 (4100406): run_atlas exited; CPU time 18325.139667
03:08:51 (4100406): called boinc_finish(0)

</stderr_txt>
]]>

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