Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:16:49 (2208898): wrapper (7.7.26015): starting
07:16:49 (2208898): wrapper: running run_atlas (--nthreads 3)
[2026-03-08 07:16:49] Arguments: --nthreads 3
[2026-03-08 07:16:49] Threads: 3
[2026-03-08 07:16:49] Checking for CVMFS
[2026-03-08 07:16:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 07:16:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 07:16:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 07:16:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 07:16:51] 2.9.2.0 1806744 2650 78272 157030 3 49 20708353 36864000 0 130560 0 1118180 99.983 108117 10003 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 07:16:51] CVMFS is ok
[2026-03-08 07:16:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 07:16:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 07:16:51] Further information can be found at the LHC@home message board.
[2026-03-08 07:16:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 07:16:51] Checking for apptainer binary...
[2026-03-08 07:16:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 07:16:51] Running /usr/bin/apptainer --version
[2026-03-08 07:16:51] apptainer version 1.4.1-1.1
[2026-03-08 07:16:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 07:16:51] thA385
[2026-03-08 07:16:51] apptainer works
[2026-03-08 07:16:51] Set ATHENA_PROC_NUMBER=3
[2026-03-08 07:16:51] Set ATHENA_CORE_NUMBER=3
[2026-03-08 07:16:51] Starting ATLAS job with PandaID=7040404616
[2026-03-08 07:16:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 08:45:12]  *** The last 200 lines of the pilot log: ***
[2026-03-08 08:45:12] 2026-03-08 07:44:33,410 | INFO     | [payload] failed_post thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:33,478 | INFO     | all job control threads have been joined
[2026-03-08 08:45:12] 2026-03-08 07:44:33,496 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:33,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 08:45:12] 2026-03-08 07:44:33,632 | INFO     | [job] job monitor thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:33,741 | INFO     | [data] copytool_in thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:33,862 | INFO     | [payload] validate_post thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,043 | INFO     | [payload] control thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,227 | INFO     | [data] control thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,471 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,483 | INFO     | [job] control thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,796 | INFO     | [job] validate thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:34,877 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:35,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 08:45:12] 2026-03-08 07:44:35,621 | INFO     | [data] copytool_out thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:44:39,229 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 08:45:12] 2026-03-08 07:45:02,220 | INFO     | PID=2212940 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 08:45:12] 2026-03-08 07:45:02,220 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 08:45:12] 2026-03-08 07:45:02,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 08:45:12] 2026-03-08 07:45:02,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 08:45:12] 2026-03-08 07:45:07,455 | INFO     | [monitor] cgroup control has ended
[2026-03-08 08:45:12] 2026-03-08 07:45:07,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453394687808)>', '<ExcThread(monitor, started 140453030631168)>']
[2026-03-08 08:45:12] 2026-03-08 07:45:08,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 08:45:12] 2026-03-08 07:45:08,252 | INFO     | [monitor] control thread has ended
[2026-03-08 08:45:12] 2026-03-08 07:45:12,716 | INFO     | all workflow threads have been joined
[2026-03-08 08:45:12] 2026-03-08 07:45:12,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 08:45:12] 2026-03-08 07:45:12,717 | INFO     | traces error code: 0
[2026-03-08 08:45:12] 2026-03-08 07:45:12,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 08:45:12] 2026-03-08 07:45:12,765 [wrapper] ==== pilot stdout END ====
[2026-03-08 08:45:12] 2026-03-08 07:45:12,768 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 08:45:12] 2026-03-08 07:45:12,771 [wrapper] pilotpid: 2212940
[2026-03-08 08:45:12] 2026-03-08 07:45:12,773 [wrapper] Pilot exit status: 0
[2026-03-08 08:45:12] 2026-03-08 07:45:12,781 [wrapper] pandaids: 7040404616
[2026-03-08 08:45:12] 2026-03-08 07:45:12,798 [wrapper] cleanup supervisor_pilot 2222885 2212941
[2026-03-08 08:45:12] 2026-03-08 07:45:12,800 [wrapper] Test setup, not cleaning
[2026-03-08 08:45:12] 2026-03-08 07:45:12,803 [wrapper] apfmon messages muted
[2026-03-08 08:45:12] 2026-03-08 07:45:12,805 [wrapper] ==== wrapper stdout END ====
[2026-03-08 08:45:12] 2026-03-08 07:45:12,808 [wrapper] ==== wrapper stderr END ====
[2026-03-08 08:45:12]  *** Error codes and diagnostics ***
[2026-03-08 08:45:12]     "exeErrorCode": 0,
[2026-03-08 08:45:12]     "exeErrorDiag": "",
[2026-03-08 08:45:12]     "pilotErrorCode": 0,
[2026-03-08 08:45:12]     "pilotErrorDiag": "",
[2026-03-08 08:45:12]  *** Listing of results directory ***
[2026-03-08 08:45:12] total 501608
[2026-03-08 08:45:12] -rwx------ 1 boinc boinc     36322 Mar  4 19:35 runpilot2-wrapper.sh
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc    584627 Mar  4 19:35 pilot3.tar.gz
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      5111 Mar  4 19:35 queuedata.json
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc       100 Mar  8 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 08:45:12] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 07:16 run_atlas
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc       105 Mar  8 07:16 job.xml
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc 298851283 Mar  8 07:16 EVNT.48717224._000054.pool.root.1
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc    597948 Mar  8 07:16 input.tar.gz
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc     15845 Mar  8 07:16 start_atlas.sh
[2026-03-08 08:45:12] drwxrwx--x 2 boinc boinc      4096 Mar  8 07:16 shared
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc         0 Mar  8 07:16 boinc_setup_complete
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      6445 Mar  8 07:16 init_data.xml
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc         0 Mar  8 07:16 boinc_lockfile
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      2595 Mar  8 07:16 pandaJob.out
[2026-03-08 08:45:12] -rw------- 1 boinc boinc    999169 Mar  8 07:16 agis_schedconf.cvmfs.json
[2026-03-08 08:45:12] -rw------- 1 boinc boinc   1521291 Mar  8 07:16 agis_ddmendpoints.agis.ALL.json
[2026-03-08 08:45:12] -rw------- 1 boinc boinc       423 Mar  8 07:17 workernode_map.json
[2026-03-08 08:45:12] drwx------ 5 boinc boinc      4096 Mar  8 07:17 pilot3
[2026-03-08 08:45:12] -rw------- 1 boinc boinc 208815492 Mar  8 08:44 HITS.48973452._001343.pool.root.1
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc       529 Mar  8 08:44 boinc_task_state.xml
[2026-03-08 08:45:12] -rw------- 1 boinc boinc      1024 Mar  8 08:44 memory_monitor_summary.json
[2026-03-08 08:45:12] -rw------- 1 boinc boinc        95 Mar  8 08:44 pilot_heartbeat.json
[2026-03-08 08:45:12] -rw------- 1 boinc boinc    265334 Mar  8 08:44 log.48973452._001343.job.log.tgz.1
[2026-03-08 08:45:12] -rw------- 1 boinc boinc      6302 Mar  8 08:44 heartbeat.json
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      8192 Mar  8 08:45 boinc_mmap_file
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc        27 Mar  8 08:45 wrapper_checkpoint.txt
[2026-03-08 08:45:12] -rw------- 1 boinc boinc      4934 Mar  8 08:45 pilotlog.txt
[2026-03-08 08:45:12] -rw------- 1 boinc boinc    766052 Mar  8 08:45 log.48973452._001343.job.log.1
[2026-03-08 08:45:12] -rw------- 1 boinc boinc       357 Mar  8 08:45 output.list
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc       620 Mar  8 08:45 runtime_log
[2026-03-08 08:45:12] -rw------- 1 boinc boinc   1044480 Mar  8 08:45 result.tar.gz
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      8896 Mar  8 08:45 runtime_log.err
[2026-03-08 08:45:12] -rw------- 1 boinc boinc       657 Mar  8 08:45 GAFODmuE6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwKJLDmLp2mfm.diag
[2026-03-08 08:45:12] -rw-r--r-- 1 boinc boinc      6469 Mar  8 08:45 stderr.txt
[2026-03-08 08:45:12] HITS file was successfully produced:
[2026-03-08 08:45:12] -rw------- 1 boinc boinc 208815492 Mar  8 08:44 shared/HITS.pool.root.1
[2026-03-08 08:45:12]  *** Contents of shared directory: ***
[2026-03-08 08:45:12] total 497400
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc 298851283 Mar  8 07:16 ATLAS.root_0
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc    597948 Mar  8 07:16 input.tar.gz
[2026-03-08 08:45:12] -rw-r--r-- 2 boinc boinc     15845 Mar  8 07:16 start_atlas.sh
[2026-03-08 08:45:12] -rw------- 1 boinc boinc 208815492 Mar  8 08:44 HITS.pool.root.1
[2026-03-08 08:45:12] -rw------- 1 boinc boinc   1044480 Mar  8 08:45 result.tar.gz
08:45:13 (2208898): run_atlas exited; CPU time 15045.936314
08:45:13 (2208898): called boinc_finish(0)

</stderr_txt>
]]>

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