Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-08 14:20:11 (4648): vboxwrapper version 26210
2026-03-08 14:20:11 (4648): BOINC client version: 8.2.8
2026-03-08 14:20:11 (4648): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-08 14:20:12 (4648): Successfully copied 'init_data.xml' to the shared directory.
2026-03-08 14:20:12 (4648): Create VM. (boinc_4cfd24b63745d978, slot#1)
2026-03-08 14:20:12 (4648): Setting Memory Size for VM. (4800MB)
2026-03-08 14:20:13 (4648): Setting CPU Count for VM. (8)
2026-03-08 14:20:13 (4648): Setting Chipset Options for VM.
2026-03-08 14:20:13 (4648): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-08 14:20:13 (4648): Setting Boot Options for VM.
2026-03-08 14:20:14 (4648): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-08 14:20:14 (4648): Enabling VM Network Access.
2026-03-08 14:20:14 (4648): Disabling USB Support for VM.
2026-03-08 14:20:15 (4648): Disabling COM Port Support for VM.
2026-03-08 14:20:15 (4648): Disabling LPT Port Support for VM.
2026-03-08 14:20:15 (4648): Disabling Audio Support for VM.
2026-03-08 14:20:16 (4648): Disabling Clipboard Support for VM.
2026-03-08 14:20:16 (4648): Disabling Drag and Drop Support for VM.
2026-03-08 14:20:16 (4648): Adding storage controller(s) to VM.
2026-03-08 14:20:16 (4648): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-08 14:20:17 (4648): Adding VirtualBox Guest Additions to VM.
2026-03-08 14:20:17 (4648): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-08 14:20:17 (4648): forwarding host port 62508 to guest port 80
2026-03-08 14:20:18 (4648): Enabling remote desktop for VM.
2026-03-08 14:20:18 (4648): Required extension pack not installed, remote desktop not enabled.
2026-03-08 14:20:18 (4648): Enabling shared directory for VM.
2026-03-08 14:20:18 (4648): Starting VM using VBoxManage interface. (boinc_4cfd24b63745d978, slot#1)
2026-03-08 14:20:23 (4648): Successfully started VM. (PID = '2572')
2026-03-08 14:20:23 (4648): Reporting VM Process ID to BOINC.
2026-03-08 14:20:23 (4648): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-08 14:20:23 (4648): Guest Log: CPUID EDX: 0x178bfbff
2026-03-08 14:20:23 (4648): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-08 14:20:23 (4648): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-08 14:20:23 (4648): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-08 14:20:23 (4648): Detected: Web Application Enabled (http://localhost:62508)
2026-03-08 14:20:23 (4648): Preference change detected
2026-03-08 14:20:23 (4648): Setting CPU throttle for VM. (100%)
2026-03-08 14:20:23 (4648): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 360 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-08 14:20:25 (4648): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-08 14:20:25 (4648): Guest Log: BIOS: Booting from Hard Disk...
2026-03-08 14:20:28 (4648): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-08 14:20:28 (4648): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-08 14:20:28 (4648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-08 14:20:34 (4648): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-08 14:20:34 (4648): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-08 14:20:38 (4648): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000096 main     Log opened 2026-03-08T14:20:36.265816000Z
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000172 main     OS Product: Linux
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000220 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000242 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000242 main     Process ID: 1374
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000243 main     Package type: LINUX_64BITS_GENERIC
2026-03-08 14:20:38 (4648): Guest Log: 00:00:00.000851 main     5.2.32 r132073 started. Verbose level = 0
2026-03-08 14:20:38 (4648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-08 14:20:38 (4648): Guest Log: [INFO] Mounting shared directory
2026-03-08 14:20:38 (4648): Guest Log: [INFO] Checking for init_data.xml
2026-03-08 14:20:43 (4648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-08 14:20:43 (4648): Guest Log: [INFO] Detected branch: prod
2026-03-08 14:20:43 (4648): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-08 14:20:43 (4648): Guest Log: Copying input files
2026-03-08 14:20:45 (4648): Guest Log: Copied input files into RunAtlas.
2026-03-08 14:20:45 (4648): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-08 14:20:45 (4648): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-08 14:20:45 (4648): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-08 14:20:45 (4648): Guest Log: Further information can be found at the LHC@home message board.
2026-03-08 14:20:48 (4648): Guest Log: 00:00:10.002937 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 204 326 000ns (GuestNow=1 772 976 048 063 150 000 ns GuestLast=1 772 979 636 267 476 000 ns fSetTimeLastLoop=true )
2026-03-08 14:20:53 (4648): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-08 14:20:53 (4648): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-08 14:20:53 (4648): Guest Log: 2.6.3.0 1649 0 30056 157041 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-08 14:20:54 (4648): Guest Log: copied the webapp to /var/www
2026-03-08 14:20:54 (4648): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-08 14:20:54 (4648): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-08 14:20:54 (4648): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-08 14:20:54 (4648): Guest Log:  *** Starting ATLAS job. (PandaID=7039126139 taskID=48955006) ***
2026-03-08 15:28:54 (4648): Guest Log:  *** Job finished ***
2026-03-08 15:28:54 (4648): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:38,214 | INFO     | all workflow threads have been joined
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:38,214 | INFO     | end of generic workflow (traces error code: 0)
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:38,214 | INFO     | traces error code: 0
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:38,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,506 | INFO     | PID=6089 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,507 | INFO     | found 0 job(s) in 20 queues
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,507 | INFO     | [monitor] control thread has ended
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,585 [wrapper] ==== pilot stdout END ====
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,588 [wrapper] ==== wrapper stdout RESUME ====
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,592 [wrapper] pilotpid: 6089
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:50,596 [wrapper] Pilot exit status: 0
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,243 [wrapper] pandaids: 7039126139
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,267 [wrapper] cleanup supervisor_pilot 15828 6090
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,274 [wrapper] Test setup, not cleaning
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,278 [wrapper] apfmon messages muted
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,282 [wrapper] ==== wrapper stdout END ====
2026-03-08 15:28:54 (4648): Guest Log: 2026-03-08 14:28:51,286 [wrapper] ==== wrapper stderr END ====
2026-03-08 15:28:54 (4648): Guest Log:  *** Error codes and diagnostics ***
2026-03-08 15:28:54 (4648): Guest Log:     "exeErrorCode": 0,
2026-03-08 15:28:54 (4648): Guest Log:     "exeErrorDiag": "",
2026-03-08 15:28:54 (4648): Guest Log:     "pilotErrorCode": 0,
2026-03-08 15:28:54 (4648): Guest Log:     "pilotErrorDiag": "",
2026-03-08 15:28:54 (4648): Guest Log:  *** Listing of results directory ***
2026-03-08 15:28:54 (4648): Guest Log: total 187904
2026-03-08 15:28:54 (4648): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 14:01 pilot3.tar.gz
2026-03-08 15:28:54 (4648): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 14:02 runpilot2-wrapper.sh
2026-03-08 15:28:54 (4648): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 14:03 queuedata.json
2026-03-08 15:28:54 (4648): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  8 13:20 start_atlas.sh
2026-03-08 15:28:54 (4648): Guest Log: -rwxr-xr-x. 1 atlas atlas    597955 Mar  8 13:20 input.tar.gz
2026-03-08 15:28:54 (4648): Guest Log: -rwxr-xr-x. 1 atlas atlas      8554 Mar  8 13:20 init_data.xml
2026-03-08 15:28:54 (4648): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  8 13:20 EVNT.46701403._000327.pool.root.1 -> /data/./ATLAS.root_0
2026-03-08 15:28:54 (4648): Guest Log: -rw-r--r--. 1 atlas atlas      2564 Mar  8 13:20 pandaJob.out
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas    999212 Mar  8 13:21 agis_schedconf.cvmfs.json
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  8 13:21 agis_ddmendpoints.agis.ALL.json
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas       421 Mar  8 13:21 workernode_map.json
2026-03-08 15:28:54 (4648): Guest Log: drwx------. 5 atlas atlas      4096 Mar  8 13:21 pilot3
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas 186676215 Mar  8 14:27 HITS.48955006._016350.pool.root.1
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas        95 Mar  8 14:28 pilot_heartbeat.json
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  8 14:28 memory_monitor_summary.json
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas    353488 Mar  8 14:28 log.48955006._016350.job.log.tgz.1
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas      6331 Mar  8 14:28 heartbeat.json
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas       744 Mar  8 14:28 pilotlog.txt
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas    584848 Mar  8 14:28 log.48955006._016350.job.log.1
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas       357 Mar  8 14:28 output.list
2026-03-08 15:28:54 (4648): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  8 14:28 runtime_log
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas    952320 Mar  8 14:28 result.tar.gz
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas       648 Mar  8 14:28 YHyNDm7P7I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVjTLDmwmfYjn.diag
2026-03-08 15:28:54 (4648): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar  8 14:28 runtime_log.err
2026-03-08 15:28:54 (4648): Guest Log: Looking for outputfile HITS.48955006._016350.pool.root.1
2026-03-08 15:28:54 (4648): Guest Log: HITS file was successfully produced
2026-03-08 15:28:54 (4648): Guest Log: -rw-------. 1 atlas atlas 186676215 Mar  8 14:27 /home/atlas/RunAtlas/HITS.48955006._016350.pool.root.1
2026-03-08 15:28:55 (4648): Guest Log: Successfully finished the ATLAS job!
2026-03-08 15:28:55 (4648): Guest Log: Copying the results back to the shared directory!
2026-03-08 15:28:55 (4648): Guest Log:  *** Contents of shared directory: ***
2026-03-08 15:28:55 (4648): Guest Log: total 612448
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root 438886332 Mar  8 13:20 ATLAS.root_0
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root 186676215 Mar  8  2026 HITS.pool.root.1
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root      8554 Mar  8 13:20 init_data.xml
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root    597955 Mar  7 18:57 input.tar.gz
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root    952320 Mar  8  2026 result.tar.gz
2026-03-08 15:28:55 (4648): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  7 18:57 start_atlas.sh
2026-03-08 15:28:55 (4648): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-08 15:28:55 (4648): VM Completion File Detected.
2026-03-08 15:28:55 (4648): Powering off VM.
2026-03-08 15:28:55 (4648): Successfully stopped VM.
2026-03-08 15:28:55 (4648): Deregistering VM. (boinc_4cfd24b63745d978, slot#1)
2026-03-08 15:28:55 (4648): Removing network bandwidth throttle group from VM.
2026-03-08 15:28:56 (4648): Removing VM from VirtualBox.
2026-03-08 15:29:01 (4648): called boinc_finish(0)

</stderr_txt>
]]>

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