Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:24 (2733279): wrapper (7.7.26015): starting
13:36:24 (2733279): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 13:36:24] Arguments: --nthreads 4
[2026-03-07 13:36:24] Threads: 4
[2026-03-07 13:36:24] Checking for CVMFS
[2026-03-07 13:36:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 13:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 13:36:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 13:36:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 13:36:26] 2.13.3.0 9162 7463 50888 157010 0 50 3885082 4096001 2748 130560 2 6396762 99.991 259088 79 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 13:36:26] CVMFS is ok
[2026-03-07 13:36:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 13:36:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 13:36:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 13:36:26] Further information can be found at the LHC@home message board.
[2026-03-07 13:36:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 13:36:26] Checking for apptainer binary...
[2026-03-07 13:36:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 13:36:26] Running /usr/bin/apptainer --version
[2026-03-07 13:36:26] apptainer version 1.4.5
[2026-03-07 13:36:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 13:36:26] SETI64-Ubuntu
[2026-03-07 13:36:26] apptainer works
[2026-03-07 13:36:26] Set ATHENA_PROC_NUMBER=4
[2026-03-07 13:36:26] Set ATHENA_CORE_NUMBER=4
[2026-03-07 13:36:26] Starting ATLAS job with PandaID=7045087698
[2026-03-07 13:36:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/87 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 17:13:16]  *** The last 200 lines of the pilot log: ***
[2026-03-07 17:13:16] 2026-03-07 22:12:43,775 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/87/workernode_map.json
[2026-03-07 17:13:16] 2026-03-07 22:12:43,775 | INFO     | this job has now completed (state=finished)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,775 | INFO     | log transfer has been attempted: DONE
[2026-03-07 17:13:16] 2026-03-07 22:12:43,775 | INFO     | job 7045087698 has finished - writing final server update
[2026-03-07 17:13:16] 2026-03-07 22:12:43,776 | INFO     | total number of processed events: 400 (read)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,807 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/PanDA_Pilot-7045087698/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,808 | INFO     | extracted standard info from prmon json
[2026-03-07 17:13:16] 2026-03-07 22:12:43,808 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 17:13:16] 2026-03-07 22:12:43,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 17:13:16] 2026-03-07 22:12:43,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 17:13:16] 2026-03-07 22:12:43,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 17:13:16] 2026-03-07 22:12:43,813 | INFO     | fitting pss+swap vs Time
[2026-03-07 17:13:16] 2026-03-07 22:12:43,813 | INFO     | sum of square deviations: 2954447953.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,815 | INFO     | sum of deviations: -34040555473.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,815 | INFO     | mean x: 1772915068.5
[2026-03-07 17:13:16] 2026-03-07 22:12:43,815 | INFO     | mean y: 2390894.4056603773
[2026-03-07 17:13:16] 2026-03-07 22:12:43,815 | INFO     | intersect: 20429561959.277637
[2026-03-07 17:13:16] 2026-03-07 22:12:43,815 | INFO     | chi2: 1.7306242886031316
[2026-03-07 17:13:16] 2026-03-07 22:12:43,816 | INFO     | sum of square deviations: 2750295288.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,817 | INFO     | sum of deviations: -33214102157.999992
[2026-03-07 17:13:16] 2026-03-07 22:12:43,817 | INFO     | mean x: 1772914916.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,817 | INFO     | mean y: 2391511.8599033817
[2026-03-07 17:13:16] 2026-03-07 22:12:43,818 | INFO     | intersect: 21413102352.399284
[2026-03-07 17:13:16] 2026-03-07 22:12:43,818 | INFO     | chi2: 1.7255366444472346
[2026-03-07 17:13:16] 2026-03-07 22:12:43,818 | INFO     | current chi2=1.7255366444472346 (change=0.29397739240117715 %)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,818 | INFO     | right removable region: 206
[2026-03-07 17:13:16] 2026-03-07 22:12:43,818 | INFO     | sum of square deviations: 2750295288.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | sum of deviations: -57773983097.00001
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | mean x: 1772915221.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | mean y: 2408338.7004830916
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | intersect: 37245090772.6123
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | chi2: 0.3946953722406532
[2026-03-07 17:13:16] 2026-03-07 22:12:43,820 | INFO     | current chi2=0.3946953722406532 (change=77.1934685743241 %)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,821 | INFO     | sum of square deviations: 2555770710.5
[2026-03-07 17:13:16] 2026-03-07 22:12:43,822 | INFO     | sum of deviations: -50344192857.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,822 | INFO     | mean x: 1772915373.5
[2026-03-07 17:13:16] 2026-03-07 22:12:43,822 | INFO     | mean y: 2402491.1881188117
[2026-03-07 17:13:16] 2026-03-07 22:12:43,822 | INFO     | intersect: 34925720579.1251
[2026-03-07 17:13:16] 2026-03-07 22:12:43,823 | INFO     | chi2: 0.38187911006464065
[2026-03-07 17:13:16] 2026-03-07 22:12:43,823 | INFO     | current chi2=0.38187911006464065 (change=3.247127551370996 %)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,823 | INFO     | left removable region: 20
[2026-03-07 17:13:16] 2026-03-07 22:12:43,823 | INFO     | sum of square deviations: 1995283922.5
[2026-03-07 17:13:16] 2026-03-07 22:12:43,824 | INFO     | sum of deviations: -29586078846.0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,824 | INFO     | mean x: 1772915495.5
[2026-03-07 17:13:16] 2026-03-07 22:12:43,824 | INFO     | mean y: 2386182.419354839
[2026-03-07 17:13:16] 2026-03-07 22:12:43,825 | INFO     | intersect: 26291185007.3185
[2026-03-07 17:13:16] 2026-03-07 22:12:43,825 | INFO     | chi2: 0.29638354855965765
[2026-03-07 17:13:16] 2026-03-07 22:12:43,825 | INFO     | current memory leak: -14.83 B/s (using 186 data points, chi2=0.30)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | could have reported an average CPU frequency of 2485 MHz (11 samples)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | ..............................
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | . Timing measurements:
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | . get job = 0 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | . initial setup = 8 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | . payload setup = 7 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,826 | INFO     | . stage-in = 0 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,827 | INFO     | . payload execution = 12927 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,827 | INFO     | . stage-out = 3 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,827 | INFO     | . log creation = 0 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,827 | INFO     | ..............................
[2026-03-07 17:13:16] 2026-03-07 22:12:43,973 | INFO     | 
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | job summary report
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | --------------------------------------------------
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | PanDA job id: 7045087698
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | task id: 48997926
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | errors: (none)
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 17:13:16] 2026-03-07 22:12:43,974 | INFO     | pilot state: finished 
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | transexitcode: 0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | exeerrorcode: 0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | exeerrordiag: 
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | exitcode: 0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | exitmsg: OK
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | cpuconsumptiontime: 50275 s
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | nevents: 400
[2026-03-07 17:13:16] 2026-03-07 22:12:43,975 | INFO     | neventsw: 0
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | pid: 2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | pgrp: 2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | corecount: 4
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | event service: False
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | sizes: {0: 2295418, 1: 2295879, 12: 2295879, 12938: 2325899, 12942: 2335121}
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | --------------------------------------------------
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | 
[2026-03-07 17:13:16] 2026-03-07 22:12:43,976 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 17:13:16] 2026-03-07 22:12:44,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,010 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 17:13:16] 2026-03-07 22:12:44,011 | INFO     | job 7045087698 has completed (purged errors)
[2026-03-07 17:13:16] 2026-03-07 22:12:44,011 | INFO     | overall cleanup function is called
[2026-03-07 17:13:16] 2026-03-07 22:12:44,485 | WARNING  | process 2742828 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 17:13:16] 2026-03-07 22:12:44,867 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 17:13:16] 2026-03-07 22:12:45,021 | INFO     | --- collectZombieJob: --- 10, [2742828]
[2026-03-07 17:13:16] 2026-03-07 22:12:45,022 | INFO     | zombie collector waiting for pid 2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:45,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 17:13:16] 2026-03-07 22:12:45,022 | INFO     | collected zombie processes
[2026-03-07 17:13:16] 2026-03-07 22:12:45,022 | INFO     | will attempt to kill all subprocesses of pid=2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:45,912 | INFO     | number of running child processes to parent process 2742828: 1
[2026-03-07 17:13:16] 2026-03-07 22:12:45,912 | INFO     | maximum number of monitored processes: 6
[2026-03-07 17:13:16] 2026-03-07 22:12:45,913 | INFO     | aborting job monitoring since job object (job id=7045087698) has expired
[2026-03-07 17:13:16] 2026-03-07 22:12:46,019 | INFO     | process IDs to be killed: [2742828] (in reverse order)
[2026-03-07 17:13:16] 2026-03-07 22:12:46,175 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 17:13:16] 2026-03-07 22:12:46,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 17:13:16] 2026-03-07 22:12:46,191 | INFO     | did not find any defunct processes belonging to 2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:46,205 | INFO     | did not find any defunct processes belonging to 2742828
[2026-03-07 17:13:16] 2026-03-07 22:12:46,206 | INFO     | ready for new job
[2026-03-07 17:13:16] 2026-03-07 22:12:46,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 17:13:16] 2026-03-07 22:12:46,208 | INFO     | **************************************
[2026-03-07 17:13:16] 2026-03-07 22:12:46,208 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 17:13:16] 2026-03-07 22:12:46,209 | INFO     | **************************************
[2026-03-07 17:13:16] 2026-03-07 22:12:46,209 | INFO     | 
[2026-03-07 17:13:16] 2026-03-07 22:12:46,217 | INFO     | architecture information:
[2026-03-07 17:13:16] 2026-03-07 22:12:46,217 | INFO     | executing command: cat /etc/os-release
[2026-03-07 17:13:16] 2026-03-07 22:12:46,238 | INFO     | cat /etc/os-release:
[2026-03-07 17:13:16] NAME="CentOS Linux"
[2026-03-07 17:13:16] VERSION="7 (Core)"
[2026-03-07 17:13:16] ID="centos"
[2026-03-07 17:13:16] ID_LIKE="rhel fedora"
[2026-03-07 17:13:16] VERSION_ID="7"
[2026-03-07 17:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 17:13:16] ANSI_COLOR="0;31"
[2026-03-07 17:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 17:13:16] HOME_URL="https://www.centos.org/"
[2026-03-07 17:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 17:13:16] 
[2026-03-07 17:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 17:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 17:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 17:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 17:13:16] 
[2026-03-07 17:13:16] 2026-03-07 22:12:46,238 | INFO     | **************************************
[2026-03-07 17:13:16] 2026-03-07 22:12:46,741 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 17:13:16] 2026-03-07 22:12:46,765 | INFO     | sufficient remaining disk space (378529644544 B)
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | INFO     | update_server=False
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:13:16] 2026-03-07 22:12:46,766 | INFO     | will abort loop
[2026-03-07 17:13:16] 2026-03-07 22:12:46,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 17:13:16] 2026-03-07 22:12:46,800 | INFO     | all job control threads have been joined
[2026-03-07 17:13:16] 2026-03-07 22:12:47,363 | INFO     | all data control threads have been joined
[2026-03-07 17:13:16] 2026-03-07 22:12:47,771 | INFO     | [job] retrieve thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:47,772 | INFO     | [job] job monitor thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:47,805 | INFO     | [job] control thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,139 | INFO     | [payload] failed_post thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,177 | INFO     | all payload control threads have been joined
[2026-03-07 17:13:16] 2026-03-07 22:12:48,184 | INFO     | [job] validate thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,369 | INFO     | [data] control thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,381 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,537 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,734 | INFO     | [payload] validate_post thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,774 | INFO     | [data] copytool_out thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:48,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:13:16] 2026-03-07 22:12:49,004 | INFO     | [data] copytool_in thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:49,054 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:49,060 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:49,182 | INFO     | [payload] control thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:49,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 17:13:16] 2026-03-07 22:12:49,937 | INFO     | [job] queue monitor thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:12:53,782 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 17:13:16] 2026-03-07 22:13:08,688 | INFO     | [monitor] cgroup control has ended
[2026-03-07 17:13:16] 2026-03-07 22:13:09,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130380142212928)>', '<ExcThread(monitor, started 130379428128512)>']
[2026-03-07 17:13:16] 2026-03-07 22:13:14,908 | INFO     | all workflow threads have been joined
[2026-03-07 17:13:16] 2026-03-07 22:13:14,908 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 17:13:16] 2026-03-07 22:13:14,908 | INFO     | traces error code: 0
[2026-03-07 17:13:16] 2026-03-07 22:13:14,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 17:13:16] 2026-03-07 22:13:16,062 | INFO     | PID=2737849 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | INFO     | .. there are 4 such processes running
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 17:13:16] 2026-03-07 22:13:16,063 | INFO     | [monitor] control thread has ended
[2026-03-07 17:13:16] 2026-03-07 22:13:16,217 [wrapper] ==== pilot stdout END ====
[2026-03-07 17:13:16] 2026-03-07 22:13:16,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 17:13:16] 2026-03-07 22:13:16,223 [wrapper] pilotpid: 2737849
[2026-03-07 17:13:16] 2026-03-07 22:13:16,225 [wrapper] Pilot exit status: 0
[2026-03-07 17:13:16] 2026-03-07 22:13:16,238 [wrapper] pandaids: 7045087698
[2026-03-07 17:13:16] 2026-03-07 22:13:16,347 [wrapper] cleanup supervisor_pilot 2802944 2737850
[2026-03-07 17:13:16] 2026-03-07 22:13:16,353 [wrapper] Test setup, not cleaning
[2026-03-07 17:13:16] 2026-03-07 22:13:16,356 [wrapper] apfmon messages muted
[2026-03-07 17:13:16] 2026-03-07 22:13:16,359 [wrapper] ==== wrapper stdout END ====
[2026-03-07 17:13:16] 2026-03-07 22:13:16,364 [wrapper] ==== wrapper stderr END ====
[2026-03-07 17:13:16]  *** Error codes and diagnostics ***
[2026-03-07 17:13:16]     "exeErrorCode": 0,
[2026-03-07 17:13:16]     "exeErrorDiag": "",
[2026-03-07 17:13:16]     "pilotErrorCode": 0,
[2026-03-07 17:13:16]     "pilotErrorDiag": "",
[2026-03-07 17:13:16]  *** Listing of results directory ***
[2026-03-07 17:13:16] total 602680
[2026-03-07 17:13:16] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 09:01 pilot3.tar.gz
[2026-03-07 17:13:16] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 09:07 queuedata.json
[2026-03-07 17:13:16] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 09:07 runpilot2-wrapper.sh
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 17:13:16] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 13:36 run_atlas
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 13:36 job.xml
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd 342861085 Mar  7 13:36 EVNT.48997924._000002.pool.root.1
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 13:36 start_atlas.sh
[2026-03-07 17:13:16] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 13:36 shared
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd    597957 Mar  7 13:36 input.tar.gz
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 13:36 init_data.xml
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 13:36 boinc_setup_complete
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 13:36 boinc_lockfile
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd      2584 Mar  7 13:36 pandaJob.out
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd    999177 Mar  7 13:36 agis_schedconf.cvmfs.json
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd       424 Mar  7 13:36 workernode_map.json
[2026-03-07 17:13:16] drwx------ 5 whitlerd whitlerd      4096 Mar  7 13:36 pilot3
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd 265973458 Mar  7 17:11 HITS.48997926._000105.pool.root.1
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 17:12 boinc_task_state.xml
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd        95 Mar  7 17:12 pilot_heartbeat.json
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd      1023 Mar  7 17:12 memory_monitor_summary.json
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 17:12 agis_ddmendpoints.agis.ALL.json
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd    375717 Mar  7 17:12 log.48997926._000105.job.log.tgz.1
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd      6281 Mar  7 17:12 heartbeat.json
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  7 17:13 wrapper_checkpoint.txt
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 17:13 boinc_mmap_file
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd       823 Mar  7 17:13 pilotlog.txt
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd   1811668 Mar  7 17:13 log.48997926._000105.job.log.1
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd       357 Mar  7 17:13 output.list
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 17:13 runtime_log
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd   2201600 Mar  7 17:13 result.tar.gz
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd      9041 Mar  7 17:13 runtime_log.err
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd       650 Mar  7 17:13 BKHMDmzU7I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmc5VLDmNcgIJn.diag
[2026-03-07 17:13:16] -rw-rw-r-- 1 whitlerd whitlerd     21388 Mar  7 17:13 stderr.txt
[2026-03-07 17:13:16] HITS file was successfully produced:
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd 265973458 Mar  7 17:11 shared/HITS.pool.root.1
[2026-03-07 17:13:16]  *** Contents of shared directory: ***
[2026-03-07 17:13:16] total 597328
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd 342861085 Mar  7 13:36 ATLAS.root_0
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 13:36 start_atlas.sh
[2026-03-07 17:13:16] -rw-r--r-- 2 whitlerd whitlerd    597957 Mar  7 13:36 input.tar.gz
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd 265973458 Mar  7 17:11 HITS.pool.root.1
[2026-03-07 17:13:16] -rw------- 1 whitlerd whitlerd   2201600 Mar  7 17:13 result.tar.gz
17:13:18 (2733279): run_atlas exited; CPU time 50942.679386
17:13:18 (2733279): called boinc_finish(0)

</stderr_txt>
]]>

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