Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:27:31 (3584859): wrapper (7.7.26015): starting
20:27:31 (3584859): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 20:27:31] Arguments: --nthreads 4
[2026-03-07 20:27:31] Threads: 4
[2026-03-07 20:27:31] Checking for CVMFS
[2026-03-07 20:27:31] No cvmfs_config command found, will try listing directly
[2026-03-07 20:27:31] CVMFS is ok
[2026-03-07 20:27:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 20:27:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 20:27:31] Further information can be found at the LHC@home message board.
[2026-03-07 20:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 20:27:31] Checking for apptainer binary...
[2026-03-07 20:27:31] which: no apptainer in ((null))
[2026-03-07 20:27:31] apptainer is not installed, using version from CVMFS
[2026-03-07 20:27:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 20:27:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 20:27:31] apptainer works
[2026-03-07 20:27:31] Set ATHENA_PROC_NUMBER=4
[2026-03-07 20:27:31] Set ATHENA_CORE_NUMBER=4
[2026-03-07 20:27:31] Starting ATLAS job with PandaID=7039126180
[2026-03-07 20:27:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 21:42:16]  *** The last 200 lines of the pilot log: ***
[2026-03-07 21:42:16]  mtime=0
[2026-03-07 21:42:16]  protocol_id=None
[2026-03-07 21:42:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 21:42:16]  replicas=None
[2026-03-07 21:42:16]  scope=mc23_13p6TeV
[2026-03-07 21:42:16]  status=None
[2026-03-07 21:42:16]  status_code=0
[2026-03-07 21:42:16]  storage_token=
[2026-03-07 21:42:16]  surl=/var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039126180/log.48955006._016391.job.log.tgz.1
[2026-03-07 21:42:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/44/log.48955006._016391.job.log.tgz.1
[2026-03-07 21:42:16]  workdir=None
[2026-03-07 21:42:16] ]
[2026-03-07 21:42:16] 2026-03-07 20:41:38,248 | INFO     | transferring file log.48955006._016391.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039126180/log.48955006._016391.job.log.tgz.1 to /var/lib/b
[2026-03-07 21:42:16] 2026-03-07 20:41:38,248 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039126180/log.48955006._016391.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/8/lo
[2026-03-07 21:42:16] 2026-03-07 20:41:38,266 | INFO     | adding to output.list: log.48955006._016391.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/44/log.48955006._016391.job.log.tg
[2026-03-07 21:42:16] 2026-03-07 20:41:38,267 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 21:42:16] 2026-03-07 20:41:38,267 | INFO     | summary of transferred files:
[2026-03-07 21:42:16] 2026-03-07 20:41:38,267 | INFO     |  -- lfn=log.48955006._016391.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 21:42:16] 2026-03-07 20:41:38,267 | INFO     | stage-out finished correctly
[2026-03-07 21:42:16] 2026-03-07 20:41:39,004 | INFO     | time since job start (4436s) is within the limit (349056.0s)
[2026-03-07 21:42:16] 2026-03-07 20:41:41,013 | INFO     | time since job start (4438s) is within the limit (349056.0s)
[2026-03-07 21:42:16] 2026-03-07 20:41:41,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 21:42:16] 2026-03-07 20:41:43,018 | INFO     | time since job start (4440s) is within the limit (349056.0s)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,208 | INFO     | job 7039126180 has state=finished
[2026-03-07 21:42:16] 2026-03-07 20:41:44,208 | INFO     | preparing for final server update for job 7039126180 in state='finished'
[2026-03-07 21:42:16] 2026-03-07 20:41:44,208 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039126180/jobReport.json
[2026-03-07 21:42:16] 2026-03-07 20:41:44,210 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/8/workernode_map.json
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | INFO     | this job has now completed (state=finished)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | INFO     | log transfer has been attempted: DONE
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | INFO     | job 7039126180 has finished - writing final server update
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_82252/.job.ad'
[2026-03-07 21:42:16] 2026-03-07 20:41:44,211 | INFO     | total number of processed events: 400 (read)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,235 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039126180/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,236 | INFO     | extracted standard info from prmon json
[2026-03-07 21:42:16] 2026-03-07 20:41:44,236 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 21:42:16] 2026-03-07 20:41:44,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 21:42:16] 2026-03-07 20:41:44,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 21:42:16] 2026-03-07 20:41:44,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 21:42:16] 2026-03-07 20:41:44,237 | INFO     | fitting pss+swap vs Time
[2026-03-07 21:42:16] 2026-03-07 20:41:44,237 | INFO     | sum of square deviations: 89127252.5
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | sum of deviations: -583961448.5000001
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | mean x: 1772913970.5
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | mean y: 2338276.4393939395
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | intersect: 11618464447.04099
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | chi2: 0.000310837483460757
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | current memory leak: -6.55 B/s (using 66 data points, chi2=0.00)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | could have reported an average CPU frequency of 3605 MHz (6 samples)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | ..............................
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . Timing measurements:
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . get job = 0 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . initial setup = 4 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . payload setup = 4 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . stage-in = 0 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . payload execution = 4415 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . stage-out = 0 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | . log creation = 0 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,238 | INFO     | ..............................
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | 
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | job summary report
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | --------------------------------------------------
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | PanDA job id: 7039126180
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | task id: 48955006
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | errors: (none)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | pilot state: finished 
[2026-03-07 21:42:16] 2026-03-07 20:41:44,299 | INFO     | transexitcode: 0
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | exeerrorcode: 0
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | exeerrordiag: 
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | exitcode: 0
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | exitmsg: OK
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | cpuconsumptiontime: 16948 s
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | nevents: 400
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | neventsw: 0
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | pid: 3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | pgrp: 3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | corecount: 4
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | event service: False
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | sizes: {0: 2295554, 1: 2295816, 11: 2295844, 4423: 2322017, 4424: 2331037, 4427: 2331093, 4430: 2331415}
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | --------------------------------------------------
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | 
[2026-03-07 21:42:16] 2026-03-07 20:41:44,300 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/8
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | job 7039126180 has completed (purged errors)
[2026-03-07 21:42:16] 2026-03-07 20:41:44,320 | INFO     | overall cleanup function is called
[2026-03-07 21:42:16] 2026-03-07 20:41:44,685 | WARNING  | process 3595287 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 21:42:16] 2026-03-07 20:41:44,980 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:42:16] 2026-03-07 20:41:45,327 | INFO     | --- collectZombieJob: --- 10, [3595287]
[2026-03-07 21:42:16] 2026-03-07 20:41:45,329 | INFO     | zombie collector waiting for pid 3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:45,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 21:42:16] 2026-03-07 20:41:45,333 | INFO     | collected zombie processes
[2026-03-07 21:42:16] 2026-03-07 20:41:45,333 | INFO     | will attempt to kill all subprocesses of pid=3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:45,683 | INFO     | number of running child processes to parent process 3595287: 1
[2026-03-07 21:42:16] 2026-03-07 20:41:45,684 | INFO     | maximum number of monitored processes: 6
[2026-03-07 21:42:16] 2026-03-07 20:41:45,684 | INFO     | aborting job monitoring since job object (job id=7039126180) has expired
[2026-03-07 21:42:16] 2026-03-07 20:41:46,004 | INFO     | process IDs to be killed: [3595287] (in reverse order)
[2026-03-07 21:42:16] 2026-03-07 20:41:46,227 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 21:42:16] 2026-03-07 20:41:46,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 21:42:16] 2026-03-07 20:41:46,257 | INFO     | did not find any defunct processes belonging to 3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:46,284 | INFO     | did not find any defunct processes belonging to 3595287
[2026-03-07 21:42:16] 2026-03-07 20:41:46,285 | INFO     | ready for new job
[2026-03-07 21:42:16] 2026-03-07 20:41:46,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 21:42:16] 2026-03-07 20:41:46,286 | INFO     | **************************************
[2026-03-07 21:42:16] 2026-03-07 20:41:46,286 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 21:42:16] 2026-03-07 20:41:46,286 | INFO     | **************************************
[2026-03-07 21:42:16] 2026-03-07 20:41:46,286 | INFO     | 
[2026-03-07 21:42:16] 2026-03-07 20:41:46,292 | INFO     | architecture information:
[2026-03-07 21:42:16] 2026-03-07 20:41:46,292 | INFO     | executing command: cat /etc/os-release
[2026-03-07 21:42:16] 2026-03-07 20:41:46,304 | INFO     | cat /etc/os-release:
[2026-03-07 21:42:16] NAME="CentOS Linux"
[2026-03-07 21:42:16] VERSION="7 (Core)"
[2026-03-07 21:42:16] ID="centos"
[2026-03-07 21:42:16] ID_LIKE="rhel fedora"
[2026-03-07 21:42:16] VERSION_ID="7"
[2026-03-07 21:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 21:42:16] ANSI_COLOR="0;31"
[2026-03-07 21:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 21:42:16] HOME_URL="https://www.centos.org/"
[2026-03-07 21:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 21:42:16] 
[2026-03-07 21:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 21:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 21:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 21:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 21:42:16] 
[2026-03-07 21:42:16] 2026-03-07 20:41:46,304 | INFO     | **************************************
[2026-03-07 21:42:16] 2026-03-07 20:41:46,807 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/8
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | INFO     | sufficient remaining disk space (19591593984 B)
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | INFO     | update_server=False
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 21:42:16] 2026-03-07 20:41:46,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 21:42:16] 2026-03-07 20:41:46,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:42:16] 2026-03-07 20:41:46,818 | INFO     | aborting loop
[2026-03-07 21:42:16] 2026-03-07 20:41:47,549 | INFO     | all data control threads have been joined
[2026-03-07 21:42:16] 2026-03-07 20:41:47,560 | INFO     | all job control threads have been joined
[2026-03-07 21:42:16] 2026-03-07 20:41:47,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 21:42:16] 2026-03-07 20:41:47,821 | INFO     | [job] retrieve thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:47,822 | INFO     | [job] job monitor thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,076 | INFO     | [job] validate thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,261 | INFO     | all payload control threads have been joined
[2026-03-07 21:42:16] 2026-03-07 20:41:48,300 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,303 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,357 | INFO     | [payload] validate_post thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,495 | INFO     | [data] copytool_in thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,554 | INFO     | [data] control thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,565 | INFO     | [job] control thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,733 | INFO     | [payload] failed_post thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:48,821 | INFO     | [data] copytool_out thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:49,218 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:49,266 | INFO     | [payload] control thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:49,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:42:16] 2026-03-07 20:41:50,014 | INFO     | [monitor] cgroup control has ended
[2026-03-07 21:42:16] 2026-03-07 20:41:50,314 | INFO     | [job] queue monitor thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:51,799 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:57,660 | INFO     | job.realtimelogging is not enabled
[2026-03-07 21:42:16] 2026-03-07 20:41:58,664 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 21:42:16] 2026-03-07 20:41:59,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22970551695168)>', '<ExcThread(monitor, started 22970306393856)>']
[2026-03-07 21:42:16] 2026-03-07 20:42:04,726 | INFO     | all workflow threads have been joined
[2026-03-07 21:42:16] 2026-03-07 20:42:04,727 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 21:42:16] 2026-03-07 20:42:04,727 | INFO     | traces error code: 0
[2026-03-07 21:42:16] 2026-03-07 20:42:04,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 21:42:16] 2026-03-07 20:42:15,089 | INFO     | 4446s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | INFO     | PID=3589402 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | INFO     | .. there are 51 such processes running
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 21:42:16] 2026-03-07 20:42:16,607 | INFO     | [monitor] control thread has ended
[2026-03-07 21:42:16] 2026-03-07 20:42:16,726 [wrapper] ==== pilot stdout END ====
[2026-03-07 21:42:16] 2026-03-07 20:42:16,729 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 21:42:16] 2026-03-07 20:42:16,731 [wrapper] pilotpid: 3589402
[2026-03-07 21:42:16] 2026-03-07 20:42:16,733 [wrapper] Pilot exit status: 0
[2026-03-07 21:42:16] 2026-03-07 20:42:16,741 [wrapper] pandaids: 7039126180
[2026-03-07 21:42:16] 2026-03-07 20:42:16,862 [wrapper] cleanup supervisor_pilot 4146604 3589403
[2026-03-07 21:42:16] 2026-03-07 20:42:16,865 [wrapper] Test setup, not cleaning
[2026-03-07 21:42:16] 2026-03-07 20:42:16,868 [wrapper] apfmon messages muted
[2026-03-07 21:42:16] 2026-03-07 20:42:16,871 [wrapper] ==== wrapper stdout END ====
[2026-03-07 21:42:16] 2026-03-07 20:42:16,873 [wrapper] ==== wrapper stderr END ====
[2026-03-07 21:42:16]  *** Error codes and diagnostics ***
[2026-03-07 21:42:16]     "exeErrorCode": 0,
[2026-03-07 21:42:16]     "exeErrorDiag": "",
[2026-03-07 21:42:16]     "pilotErrorCode": 0,
[2026-03-07 21:42:16]     "pilotErrorDiag": "",
[2026-03-07 21:42:16]  *** Listing of results directory ***
[2026-03-07 21:42:16] total 615424
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc    584627 Mar  7 15:01 pilot3.tar.gz
[2026-03-07 21:42:16] -rwx------. 1 boinc boinc     36322 Mar  7 15:02 runpilot2-wrapper.sh
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc      5111 Mar  7 15:03 queuedata.json
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc       100 Mar  7 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 21:42:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 20:27 run_atlas
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc       105 Mar  7 20:27 job.xml
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc      6703 Mar  7 20:27 init_data.xml
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc 443621799 Mar  7 20:27 EVNT.46701403._000328.pool.root.1
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc     15845 Mar  7 20:27 start_atlas.sh
[2026-03-07 21:42:16] drwxrwx--x. 2 boinc boinc      4096 Mar  7 20:27 shared
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc    597957 Mar  7 20:27 input.tar.gz
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc         0 Mar  7 20:27 boinc_lockfile
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc      2564 Mar  7 20:27 pandaJob.out
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc    999177 Mar  7 20:27 agis_schedconf.cvmfs.json
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc   1521291 Mar  7 20:27 agis_ddmendpoints.agis.ALL.json
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc       444 Mar  7 20:27 workernode_map.json
[2026-03-07 21:42:16] drwx------. 5 boinc boinc      4096 Mar  7 20:27 pilot3
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc 180731671 Mar  7 21:41 HITS.48955006._016391.pool.root.1
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc        95 Mar  7 21:41 pilot_heartbeat.json
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc      1028 Mar  7 21:41 memory_monitor_summary.json
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc       530 Mar  7 21:41 boinc_task_state.xml
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc    292218 Mar  7 21:41 log.48955006._016391.job.log.tgz.1
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc      6353 Mar  7 21:41 heartbeat.json
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc      8192 Mar  7 21:42 boinc_mmap_file
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc        27 Mar  7 21:42 wrapper_checkpoint.txt
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc       938 Mar  7 21:42 pilotlog.txt
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc    658886 Mar  7 21:42 log.48955006._016391.job.log.1
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc       357 Mar  7 21:42 output.list
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc       620 Mar  7 21:42 runtime_log
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc    972800 Mar  7 21:42 result.tar.gz
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc      9204 Mar  7 21:42 runtime_log.err
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc       661 Mar  7 21:42 oCXKDm8P7I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwjTLDmHh78jm.diag
[2026-03-07 21:42:16] -rw-r--r--. 1 boinc boinc     21600 Mar  7 21:42 stderr.txt
[2026-03-07 21:42:16] HITS file was successfully produced:
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc 180731671 Mar  7 21:41 shared/HITS.pool.root.1
[2026-03-07 21:42:16]  *** Contents of shared directory: ***
[2026-03-07 21:42:16] total 611284
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc 443621799 Mar  7 20:27 ATLAS.root_0
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc     15845 Mar  7 20:27 start_atlas.sh
[2026-03-07 21:42:16] -rw-r--r--. 2 boinc boinc    597957 Mar  7 20:27 input.tar.gz
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc 180731671 Mar  7 21:41 HITS.pool.root.1
[2026-03-07 21:42:16] -rw-------. 1 boinc boinc    972800 Mar  7 21:42 result.tar.gz
21:42:17 (3584859): run_atlas exited; CPU time 17132.836781
21:42:17 (3584859): called boinc_finish(0)

</stderr_txt>
]]>

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