Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:53:02 (750083): wrapper (7.7.26015): starting
06:53:02 (750083): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 06:53:02] Arguments: --nthreads 4
[2026-03-08 06:53:02] Threads: 4
[2026-03-08 06:53:02] Checking for CVMFS
[2026-03-08 06:53:02] No cvmfs_config command found, will try listing directly
[2026-03-08 06:53:02] CVMFS is ok
[2026-03-08 06:53:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 06:53:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 06:53:02] Further information can be found at the LHC@home message board.
[2026-03-08 06:53:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 06:53:02] Checking for apptainer binary...
[2026-03-08 06:53:02] which: no apptainer in ((null))
[2026-03-08 06:53:02] apptainer is not installed, using version from CVMFS
[2026-03-08 06:53:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 06:53:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-08 06:53:02] apptainer works
[2026-03-08 06:53:02] Set ATHENA_PROC_NUMBER=4
[2026-03-08 06:53:02] Set ATHENA_CORE_NUMBER=4
[2026-03-08 06:53:02] Starting ATLAS job with PandaID=7045087861
[2026-03-08 06:53:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 08:42:30]  *** The last 200 lines of the pilot log: ***
[2026-03-08 08:42:30] 2026-03-08 07:41:56,063 | INFO     | log transfer has been attempted: DONE
[2026-03-08 08:42:30] 2026-03-08 07:41:56,063 | INFO     | job 7045087861 has finished - writing final server update
[2026-03-08 08:42:30] 2026-03-08 07:41:56,063 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_485002/.job.ad'
[2026-03-08 08:42:30] 2026-03-08 07:41:56,063 | INFO     | total number of processed events: 400 (read)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,081 | INFO     | using path: /var/lib/boinc/var/slot56/slots/9/PanDA_Pilot-7045087861/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,081 | INFO     | extracted standard info from prmon json
[2026-03-08 08:42:30] 2026-03-08 07:41:56,081 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 08:42:30] 2026-03-08 07:41:56,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 08:42:30] 2026-03-08 07:41:56,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 08:42:30] 2026-03-08 07:41:56,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | fitting pss+swap vs Time
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | sum of square deviations: 379832238.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | sum of deviations: 12420119476.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | mean x: 1772952447.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | mean y: 2320041.4859813084
[2026-03-08 08:42:30] 2026-03-08 07:41:56,083 | INFO     | intersect: -57971382593.5351
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | chi2: 1.124252884078899
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | sum of square deviations: 329031285.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | sum of deviations: 11798366453.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | mean x: 1772952294.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | mean y: 2318173.6960784313
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | intersect: -63572003773.5239
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | chi2: 1.1256000884918627
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | current chi2=1.1256000884918627 (change=-0.11983108356154401 %)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | right removable region: 101
[2026-03-08 08:42:30] 2026-03-08 07:41:56,084 | INFO     | sum of square deviations: 329031285.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | sum of deviations: 1315473966.9999995
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | mean x: 1772952599.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | mean y: 2352477.8039215687
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | intersect: -7085949127.993459
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | chi2: 0.0010703885609066404
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | current chi2=0.0010703885609066404 (change=99.90479112163598 %)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | sum of square deviations: 282974608.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | sum of deviations: 785728068.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | mean x: 1772952752.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | mean y: 2354214.6391752576
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | intersect: -4920556538.131416
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | chi2: 0.0003756232120916156
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | current chi2=0.0003756232120916156 (change=64.90777033589977 %)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,085 | INFO     | sum of square deviations: 241429643.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | sum of deviations: 623942526.0000002
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | mean x: 1772952904.5
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | mean y: 2354808.2608695654
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | intersect: -4579604142.458231
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | chi2: 0.0003643074832632399
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | current chi2=0.0003643074832632399 (change=3.0125211818953757 %)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | left removable region: 30
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | sum of square deviations: 110960220.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | sum of deviations: 73739911.00000003
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | mean x: 1772953179.0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | mean y: 2357268.23943662
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | intersect: -1175879487.4792085
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | chi2: 6.50888971490481e-05
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | current memory leak: 0.66 B/s (using 71 data points, chi2=0.00)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,086 | INFO     | could have reported an average CPU frequency of 3615 MHz (7 samples)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | ..............................
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . Timing measurements:
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . get job = 0 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . initial setup = 4 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . payload setup = 4 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . stage-in = 0 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . payload execution = 6498 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . stage-out = 0 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | . log creation = 0 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,087 | INFO     | ..............................
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | 
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | job summary report
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | --------------------------------------------------
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | PanDA job id: 7045087861
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | task id: 48997926
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | errors: (none)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | pilot state: finished 
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | transexitcode: 0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | exeerrorcode: 0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | exeerrordiag: 
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | exitcode: 0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,495 | INFO     | exitmsg: OK
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | cpuconsumptiontime: 24968 s
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | nevents: 400
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | neventsw: 0
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | pid: 760714
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | pgrp: 760714
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | corecount: 4
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | event service: False
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | sizes: {0: 2295849, 11: 2295849, 6506: 2322954, 6508: 2331974, 6510: 2332030, 6511: 2332224}
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | --------------------------------------------------
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | 
[2026-03-08 08:42:30] 2026-03-08 07:41:56,496 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/9
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | job 7045087861 has completed (purged errors)
[2026-03-08 08:42:30] 2026-03-08 07:41:56,514 | INFO     | overall cleanup function is called
[2026-03-08 08:42:30] 2026-03-08 07:41:57,520 | INFO     | --- collectZombieJob: --- 10, [760714]
[2026-03-08 08:42:30] 2026-03-08 07:41:57,521 | INFO     | zombie collector waiting for pid 760714
[2026-03-08 08:42:30] 2026-03-08 07:41:57,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 08:42:30] 2026-03-08 07:41:57,521 | INFO     | collected zombie processes
[2026-03-08 08:42:30] 2026-03-08 07:41:57,521 | INFO     | will attempt to kill all subprocesses of pid=760714
[2026-03-08 08:42:30] 2026-03-08 07:41:57,948 | INFO     | process IDs to be killed: [760714] (in reverse order)
[2026-03-08 08:42:30] 2026-03-08 07:41:58,170 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 08:42:30] 2026-03-08 07:41:58,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 08:42:30] 2026-03-08 07:41:58,197 | INFO     | did not find any defunct processes belonging to 760714
[2026-03-08 08:42:30] 2026-03-08 07:41:58,223 | INFO     | did not find any defunct processes belonging to 760714
[2026-03-08 08:42:30] 2026-03-08 07:41:58,223 | INFO     | ready for new job
[2026-03-08 08:42:30] 2026-03-08 07:41:58,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 08:42:30] 2026-03-08 07:41:58,224 | INFO     | **************************************
[2026-03-08 08:42:30] 2026-03-08 07:41:58,225 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 08:42:30] 2026-03-08 07:41:58,225 | INFO     | **************************************
[2026-03-08 08:42:30] 2026-03-08 07:41:58,225 | INFO     | 
[2026-03-08 08:42:30] 2026-03-08 07:41:58,230 | INFO     | architecture information:
[2026-03-08 08:42:30] 2026-03-08 07:41:58,230 | INFO     | executing command: cat /etc/os-release
[2026-03-08 08:42:30] 2026-03-08 07:41:58,242 | INFO     | cat /etc/os-release:
[2026-03-08 08:42:30] NAME="CentOS Linux"
[2026-03-08 08:42:30] VERSION="7 (Core)"
[2026-03-08 08:42:30] ID="centos"
[2026-03-08 08:42:30] ID_LIKE="rhel fedora"
[2026-03-08 08:42:30] VERSION_ID="7"
[2026-03-08 08:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 08:42:30] ANSI_COLOR="0;31"
[2026-03-08 08:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 08:42:30] HOME_URL="https://www.centos.org/"
[2026-03-08 08:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 08:42:30] 
[2026-03-08 08:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 08:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 08:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 08:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 08:42:30] 
[2026-03-08 08:42:30] 2026-03-08 07:41:58,243 | INFO     | **************************************
[2026-03-08 08:42:30] 2026-03-08 07:41:58,746 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/9
[2026-03-08 08:42:30] 2026-03-08 07:41:58,759 | INFO     | sufficient remaining disk space (19986907136 B)
[2026-03-08 08:42:30] 2026-03-08 07:41:58,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 08:42:30] 2026-03-08 07:41:58,759 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 08:42:30] 2026-03-08 07:41:58,760 | INFO     | update_server=False
[2026-03-08 08:42:30] 2026-03-08 07:41:58,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 08:42:30] 2026-03-08 07:41:58,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:42:30] 2026-03-08 07:41:58,760 | INFO     | aborting loop
[2026-03-08 08:42:30] 2026-03-08 07:41:58,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 08:42:30] 2026-03-08 07:41:59,260 | INFO     | all payload control threads have been joined
[2026-03-08 08:42:30] 2026-03-08 07:41:59,426 | INFO     | all data control threads have been joined
[2026-03-08 08:42:30] 2026-03-08 07:41:59,459 | INFO     | all job control threads have been joined
[2026-03-08 08:42:30] 2026-03-08 07:41:59,765 | INFO     | [job] job monitor thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:41:59,765 | INFO     | [job] retrieve thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:41:59,773 | INFO     | [payload] failed_post thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,265 | INFO     | [payload] control thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,389 | INFO     | [job] validate thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,430 | INFO     | [data] control thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,464 | INFO     | [job] control thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,598 | INFO     | [payload] validate_post thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,766 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,801 | INFO     | [data] copytool_out thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:00,838 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:01,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:42:30] 2026-03-08 07:42:01,144 | INFO     | [data] copytool_in thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:01,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 08:42:30] 2026-03-08 07:42:02,148 | INFO     | [job] queue monitor thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:05,224 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 08:42:30] 2026-03-08 07:42:24,440 | INFO     | [monitor] cgroup control has ended
[2026-03-08 08:42:30] 2026-03-08 07:42:25,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22401288181568)>', '<ExcThread(monitor, started 22401049175808)>']
[2026-03-08 08:42:30] 2026-03-08 07:42:29,080 | INFO     | PID=754673 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 08:42:30] 2026-03-08 07:42:29,080 | INFO     | .. there are 51 such processes running
[2026-03-08 08:42:30] 2026-03-08 07:42:29,080 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 08:42:30] 2026-03-08 07:42:29,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 08:42:30] 2026-03-08 07:42:29,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 08:42:30] 2026-03-08 07:42:29,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 08:42:30] 2026-03-08 07:42:29,081 | INFO     | [monitor] control thread has ended
[2026-03-08 08:42:30] 2026-03-08 07:42:30,238 | INFO     | all workflow threads have been joined
[2026-03-08 08:42:30] 2026-03-08 07:42:30,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 08:42:30] 2026-03-08 07:42:30,239 | INFO     | traces error code: 0
[2026-03-08 08:42:30] 2026-03-08 07:42:30,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 08:42:30] 2026-03-08 07:42:30,375 [wrapper] ==== pilot stdout END ====
[2026-03-08 08:42:30] 2026-03-08 07:42:30,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 08:42:30] 2026-03-08 07:42:30,380 [wrapper] pilotpid: 754673
[2026-03-08 08:42:30] 2026-03-08 07:42:30,381 [wrapper] Pilot exit status: 0
[2026-03-08 08:42:30] 2026-03-08 07:42:30,390 [wrapper] pandaids: 7045087861
[2026-03-08 08:42:30] 2026-03-08 07:42:30,509 [wrapper] cleanup supervisor_pilot 1766101 754674
[2026-03-08 08:42:30] 2026-03-08 07:42:30,511 [wrapper] Test setup, not cleaning
[2026-03-08 08:42:30] 2026-03-08 07:42:30,513 [wrapper] apfmon messages muted
[2026-03-08 08:42:30] 2026-03-08 07:42:30,515 [wrapper] ==== wrapper stdout END ====
[2026-03-08 08:42:30] 2026-03-08 07:42:30,516 [wrapper] ==== wrapper stderr END ====
[2026-03-08 08:42:30]  *** Error codes and diagnostics ***
[2026-03-08 08:42:30]     "exeErrorCode": 0,
[2026-03-08 08:42:30]     "exeErrorDiag": "",
[2026-03-08 08:42:30]     "pilotErrorCode": 0,
[2026-03-08 08:42:30]     "pilotErrorDiag": "",
[2026-03-08 08:42:30]  *** Listing of results directory ***
[2026-03-08 08:42:30] total 590296
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc    584627 Mar  7 15:01 pilot3.tar.gz
[2026-03-08 08:42:30] -rwx------. 1 boinc boinc     36322 Mar  7 15:07 runpilot2-wrapper.sh
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc      5111 Mar  7 15:07 queuedata.json
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc       100 Mar  8 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 08:42:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 06:52 run_atlas
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc       105 Mar  8 06:52 job.xml
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc      6704 Mar  8 06:53 init_data.xml
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc 339810524 Mar  8 06:53 EVNT.48997924._000011.pool.root.1
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc    597954 Mar  8 06:53 input.tar.gz
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc     15845 Mar  8 06:53 start_atlas.sh
[2026-03-08 08:42:30] drwxrwx--x. 2 boinc boinc      4096 Mar  8 06:53 shared
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc         0 Mar  8 06:53 boinc_lockfile
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc      2585 Mar  8 06:53 pandaJob.out
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc    999169 Mar  8 06:53 agis_schedconf.cvmfs.json
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc   1521291 Mar  8 06:53 agis_ddmendpoints.agis.ALL.json
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc       444 Mar  8 06:53 workernode_map.json
[2026-03-08 08:42:30] drwx------. 5 boinc boinc      4096 Mar  8 06:53 pilot3
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc 258230462 Mar  8 08:41 HITS.48997926._000268.pool.root.1
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc       530 Mar  8 08:41 boinc_task_state.xml
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc      1031 Mar  8 08:41 memory_monitor_summary.json
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc    299966 Mar  8 08:41 log.48997926._000268.job.log.tgz.1
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc      6347 Mar  8 08:41 heartbeat.json
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc      8192 Mar  8 08:42 boinc_mmap_file
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc        27 Mar  8 08:42 wrapper_checkpoint.txt
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc        95 Mar  8 08:42 pilot_heartbeat.json
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc      4828 Mar  8 08:42 pilotlog.txt
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc    940680 Mar  8 08:42 log.48997926._000268.job.log.1
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc       357 Mar  8 08:42 output.list
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc       620 Mar  8 08:42 runtime_log
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc   1259520 Mar  8 08:42 result.tar.gz
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc      9204 Mar  8 08:42 runtime_log.err
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc       662 Mar  8 08:42 iY4LDmuU7I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMlTLDmrik5Vo.diag
[2026-03-08 08:42:30] -rw-r--r--. 1 boinc boinc     20871 Mar  8 08:42 stderr.txt
[2026-03-08 08:42:30] HITS file was successfully produced:
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc 258230462 Mar  8 08:41 shared/HITS.pool.root.1
[2026-03-08 08:42:30]  *** Contents of shared directory: ***
[2026-03-08 08:42:30] total 585868
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc 339810524 Mar  8 06:53 ATLAS.root_0
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc    597954 Mar  8 06:53 input.tar.gz
[2026-03-08 08:42:30] -rw-r--r--. 2 boinc boinc     15845 Mar  8 06:53 start_atlas.sh
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc 258230462 Mar  8 08:41 HITS.pool.root.1
[2026-03-08 08:42:30] -rw-------. 1 boinc boinc   1259520 Mar  8 08:42 result.tar.gz
08:42:32 (750083): run_atlas exited; CPU time 25256.702011
08:42:32 (750083): called boinc_finish(0)

</stderr_txt>
]]>

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