Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:50:12 (23663): wrapper (7.7.26015): starting
12:50:12 (23663): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 12:50:12] Arguments: --nthreads 12
[2026-03-07 12:50:12] Threads: 12
[2026-03-07 12:50:12] Checking for CVMFS
[2026-03-07 12:50:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 12:50:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 12:50:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 12:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 12:50:12] 2.11.2.0 3035 433398 99392 157009 3 187 11662078 20275201 1 130560 3 185577349 99.952 25448139 17440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 12:50:12] CVMFS is ok
[2026-03-07 12:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 12:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 12:50:12] Further information can be found at the LHC@home message board.
[2026-03-07 12:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 12:50:12] Checking for apptainer binary...
[2026-03-07 12:50:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 12:50:12] Running /usr/bin/apptainer --version
[2026-03-07 12:50:12] apptainer version 1.3.2-1.el7
[2026-03-07 12:50:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 12:50:14] c-205-31.aglt2.org
[2026-03-07 12:50:14] apptainer works
[2026-03-07 12:50:14] Set ATHENA_PROC_NUMBER=12
[2026-03-07 12:50:14] Set ATHENA_CORE_NUMBER=12
[2026-03-07 12:50:14] Starting ATLAS job with PandaID=7044090593
[2026-03-07 12:50:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 14:14:09]  *** The last 200 lines of the pilot log: ***
[2026-03-07 14:14:09]  guid=4b6929a8-8027-4adc-b968-f4535b99c181
[2026-03-07 14:14:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 14:14:09]  is_altstaged=None
[2026-03-07 14:14:09]  is_tar=False
[2026-03-07 14:14:09]  lfn=log.48958554._002017.job.log.tgz.1
[2026-03-07 14:14:09]  mtime=0
[2026-03-07 14:14:09]  protocol_id=None
[2026-03-07 14:14:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 14:14:09]  replicas=None
[2026-03-07 14:14:09]  scope=mc23_13p6TeV
[2026-03-07 14:14:09]  status=None
[2026-03-07 14:14:09]  status_code=0
[2026-03-07 14:14:09]  storage_token=
[2026-03-07 14:14:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7044090593/log.48958554._002017.job.log.tgz.1
[2026-03-07 14:14:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/d0/log.48958554._002017.job.log.tgz.1
[2026-03-07 14:14:09]  workdir=None
[2026-03-07 14:14:09] ]
[2026-03-07 14:14:09] 2026-03-07 19:13:32,436 | INFO     | transferring file log.48958554._002017.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7044090593/log.48958554._002017.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-07 14:14:09] 2026-03-07 19:13:32,436 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7044090593/log.48958554._002017.job.log.tgz.1 /tmp/boinchome/slots/0/log.48958554._002017.job
[2026-03-07 14:14:09] 2026-03-07 19:13:32,458 | INFO     | adding to output.list: log.48958554._002017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/d0/log.48958554._002017.job.log.tg
[2026-03-07 14:14:09] 2026-03-07 19:13:32,459 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 14:14:09] 2026-03-07 19:13:32,459 | INFO     | summary of transferred files:
[2026-03-07 14:14:09] 2026-03-07 19:13:32,459 | INFO     |  -- lfn=log.48958554._002017.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 14:14:09] 2026-03-07 19:13:32,459 | INFO     | stage-out finished correctly
[2026-03-07 14:14:09] 2026-03-07 19:13:33,259 | INFO     | monitor loop #378: job 0:7044090593 is in state 'finished'
[2026-03-07 14:14:09] 2026-03-07 19:13:33,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 14:14:09] 2026-03-07 19:13:34,162 | INFO     | time since job start (4980s) is within the limit (349056.0s)
[2026-03-07 14:14:09] 2026-03-07 19:13:35,245 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 14:14:09] 2026-03-07 19:13:35,768 | INFO     | monitor loop #379: job 0:7044090593 is in state 'finished'
[2026-03-07 14:14:09] 2026-03-07 19:13:35,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 14:14:09] 2026-03-07 19:13:36,174 | INFO     | time since job start (4982s) is within the limit (349056.0s)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,955 | INFO     | job 7044090593 has state=finished
[2026-03-07 14:14:09] 2026-03-07 19:13:37,955 | INFO     | preparing for final server update for job 7044090593 in state='finished'
[2026-03-07 14:14:09] 2026-03-07 19:13:37,955 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7044090593/jobReport.json
[2026-03-07 14:14:09] 2026-03-07 19:13:37,958 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-07 14:14:09] 2026-03-07 19:13:37,959 | INFO     | this job has now completed (state=finished)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,959 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,959 | INFO     | log transfer has been attempted: DONE
[2026-03-07 14:14:09] 2026-03-07 19:13:37,959 | INFO     | job 7044090593 has finished - writing final server update
[2026-03-07 14:14:09] 2026-03-07 19:13:37,960 | INFO     | total number of processed events: 400 (read)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7044090593/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,963 | INFO     | extracted standard info from prmon json
[2026-03-07 14:14:09] 2026-03-07 19:13:37,963 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 14:14:09] 2026-03-07 19:13:37,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 14:14:09] 2026-03-07 19:13:37,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 14:14:09] 2026-03-07 19:13:37,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 14:14:09] 2026-03-07 19:13:37,966 | INFO     | fitting pss+swap vs Time
[2026-03-07 14:14:09] 2026-03-07 19:13:37,966 | INFO     | sum of square deviations: 130793150.0
[2026-03-07 14:14:09] 2026-03-07 19:13:37,966 | INFO     | sum of deviations: -7244930838.000001
[2026-03-07 14:14:09] 2026-03-07 19:13:37,966 | INFO     | mean x: 1772908420.0
[2026-03-07 14:14:09] 2026-03-07 19:13:37,966 | INFO     | mean y: 2782119.32
[2026-03-07 14:14:09] 2026-03-07 19:13:37,967 | INFO     | intersect: 98208222427.22495
[2026-03-07 14:14:09] 2026-03-07 19:13:37,967 | INFO     | chi2: 0.09387533699162426
[2026-03-07 14:14:09] 2026-03-07 19:13:37,967 | INFO     | current memory leak: -55.39 B/s (using 75 data points, chi2=0.09)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,967 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-07 14:14:09] 2026-03-07 19:13:37,967 | INFO     | ..............................
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . Timing measurements:
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . get job = 0 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . initial setup = 7 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . payload setup = 7 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . stage-in = 0 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . payload execution = 4955 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . stage-out = 0 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | . log creation = 0 s
[2026-03-07 14:14:09] 2026-03-07 19:13:37,968 | INFO     | ..............................
[2026-03-07 14:14:09] 2026-03-07 19:13:38,046 | INFO     | 
[2026-03-07 14:14:09] 2026-03-07 19:13:38,046 | INFO     | job summary report
[2026-03-07 14:14:09] 2026-03-07 19:13:38,046 | INFO     | --------------------------------------------------
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | PanDA job id: 7044090593
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | task id: 48958554
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | errors: (none)
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | pilot state: finished 
[2026-03-07 14:14:09] 2026-03-07 19:13:38,047 | INFO     | transexitcode: 0
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | exeerrorcode: 0
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | exeerrordiag: 
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | exitcode: 0
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | exitmsg: OK
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | cpuconsumptiontime: 53060 s
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | nevents: 400
[2026-03-07 14:14:09] 2026-03-07 19:13:38,048 | INFO     | neventsw: 0
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | pid: 31758
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | pgrp: 31758
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | corecount: 12
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | event service: False
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | sizes: {0: 2295313, 1: 2295774, 12: 2295774, 4966: 2322038, 4967: 2331036, 4969: 2331092, 4972: 2331414}
[2026-03-07 14:14:09] 2026-03-07 19:13:38,049 | INFO     | --------------------------------------------------
[2026-03-07 14:14:09] 2026-03-07 19:13:38,050 | INFO     | 
[2026-03-07 14:14:09] 2026-03-07 19:13:38,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-07 14:14:09] 2026-03-07 19:13:38,076 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,076 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 14:14:09] 2026-03-07 19:13:38,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,079 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 14:14:09] 2026-03-07 19:13:38,079 | INFO     | job 7044090593 has completed (purged errors)
[2026-03-07 14:14:09] 2026-03-07 19:13:38,080 | INFO     | overall cleanup function is called
[2026-03-07 14:14:09] 2026-03-07 19:13:39,088 | INFO     | --- collectZombieJob: --- 10, [31758]
[2026-03-07 14:14:09] 2026-03-07 19:13:39,088 | INFO     | zombie collector waiting for pid 31758
[2026-03-07 14:14:09] 2026-03-07 19:13:39,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 14:14:09] 2026-03-07 19:13:39,088 | INFO     | collected zombie processes
[2026-03-07 14:14:09] 2026-03-07 19:13:39,088 | INFO     | will attempt to kill all subprocesses of pid=31758
[2026-03-07 14:14:09] 2026-03-07 19:13:39,174 | INFO     | process IDs to be killed: [31758] (in reverse order)
[2026-03-07 14:14:09] 2026-03-07 19:13:39,229 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 14:14:09] 2026-03-07 19:13:39,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 14:14:09] 2026-03-07 19:13:39,233 | INFO     | did not find any defunct processes belonging to 31758
[2026-03-07 14:14:09] 2026-03-07 19:13:39,236 | INFO     | did not find any defunct processes belonging to 31758
[2026-03-07 14:14:09] 2026-03-07 19:13:39,236 | INFO     | ready for new job
[2026-03-07 14:14:09] 2026-03-07 19:13:39,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 14:14:09] 2026-03-07 19:13:39,237 | INFO     | **************************************
[2026-03-07 14:14:09] 2026-03-07 19:13:39,237 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 14:14:09] 2026-03-07 19:13:39,237 | INFO     | **************************************
[2026-03-07 14:14:09] 2026-03-07 19:13:39,237 | INFO     | 
[2026-03-07 14:14:09] 2026-03-07 19:13:39,238 | INFO     | architecture information:
[2026-03-07 14:14:09] 2026-03-07 19:13:39,238 | INFO     | executing command: cat /etc/os-release
[2026-03-07 14:14:09] 2026-03-07 19:13:39,253 | INFO     | cat /etc/os-release:
[2026-03-07 14:14:09] NAME="CentOS Linux"
[2026-03-07 14:14:09] VERSION="7 (Core)"
[2026-03-07 14:14:09] ID="centos"
[2026-03-07 14:14:09] ID_LIKE="rhel fedora"
[2026-03-07 14:14:09] VERSION_ID="7"
[2026-03-07 14:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 14:14:09] ANSI_COLOR="0;31"
[2026-03-07 14:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 14:14:09] HOME_URL="https://www.centos.org/"
[2026-03-07 14:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 14:14:09] 
[2026-03-07 14:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 14:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 14:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 14:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 14:14:09] 
[2026-03-07 14:14:09] 2026-03-07 19:13:39,253 | INFO     | **************************************
[2026-03-07 14:14:09] 2026-03-07 19:13:39,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-07 14:14:09] 2026-03-07 19:13:39,775 | INFO     | sufficient remaining disk space (29222764544 B)
[2026-03-07 14:14:09] 2026-03-07 19:13:39,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 14:14:09] 2026-03-07 19:13:39,776 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 14:14:09] 2026-03-07 19:13:39,776 | INFO     | update_server=False
[2026-03-07 14:14:09] 2026-03-07 19:13:39,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 14:14:09] 2026-03-07 19:13:39,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:14:09] 2026-03-07 19:13:39,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:14:09] 2026-03-07 19:13:39,777 | INFO     | aborting loop
[2026-03-07 14:14:09] 2026-03-07 19:13:40,203 | INFO     | all payload control threads have been joined
[2026-03-07 14:14:09] 2026-03-07 19:13:40,214 | INFO     | all data control threads have been joined
[2026-03-07 14:14:09] 2026-03-07 19:13:40,413 | INFO     | all job control threads have been joined
[2026-03-07 14:14:09] 2026-03-07 19:13:40,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 14:14:09] 2026-03-07 19:13:40,779 | INFO     | [job] job monitor thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:40,781 | INFO     | [job] retrieve thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:40,782 | INFO     | [job] queue monitor thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:41,205 | INFO     | [payload] control thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:41,211 | INFO     | [monitor] cgroup control has ended
[2026-03-07 14:14:09] 2026-03-07 19:13:41,219 | INFO     | [data] control thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:41,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 14:14:09] 2026-03-07 19:13:41,417 | INFO     | [job] control thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:41,458 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:41,728 | INFO     | [payload] failed_post thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,091 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,104 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,115 | INFO     | [job] validate thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,216 | INFO     | [data] copytool_in thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,308 | INFO     | [payload] validate_post thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:42,563 | INFO     | [data] copytool_out thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:45,338 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:50,544 | INFO     | job.realtimelogging is not enabled
[2026-03-07 14:14:09] 2026-03-07 19:13:51,549 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 14:14:09] 2026-03-07 19:13:52,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482898061120)>', '<ExcThread(monitor, started 140482306881280)>']
[2026-03-07 14:14:09] 2026-03-07 19:13:57,296 | INFO     | all workflow threads have been joined
[2026-03-07 14:14:09] 2026-03-07 19:13:57,299 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 14:14:09] 2026-03-07 19:13:57,301 | INFO     | traces error code: 0
[2026-03-07 14:14:09] 2026-03-07 19:13:57,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 14:14:09] 2026-03-07 19:14:09,400 | INFO     | PID=27363 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 14:14:09] 2026-03-07 19:14:09,401 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 14:14:09] 2026-03-07 19:14:09,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 14:14:09] 2026-03-07 19:14:09,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 14:14:09] 2026-03-07 19:14:09,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 14:14:09] 2026-03-07 19:14:09,401 | INFO     | [monitor] control thread has ended
[2026-03-07 14:14:09] 2026-03-07 19:14:09,518 [wrapper] ==== pilot stdout END ====
[2026-03-07 14:14:09] 2026-03-07 19:14:09,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 14:14:09] 2026-03-07 19:14:09,525 [wrapper] pilotpid: 27363
[2026-03-07 14:14:09] 2026-03-07 19:14:09,529 [wrapper] Pilot exit status: 0
[2026-03-07 14:14:09] 2026-03-07 19:14:09,545 [wrapper] pandaids: 7044090593
[2026-03-07 14:14:09] 2026-03-07 19:14:09,594 [wrapper] cleanup supervisor_pilot 21668 27364
[2026-03-07 14:14:09] 2026-03-07 19:14:09,598 [wrapper] Test setup, not cleaning
[2026-03-07 14:14:09] 2026-03-07 19:14:09,601 [wrapper] apfmon messages muted
[2026-03-07 14:14:09] 2026-03-07 19:14:09,605 [wrapper] ==== wrapper stdout END ====
[2026-03-07 14:14:09] 2026-03-07 19:14:09,609 [wrapper] ==== wrapper stderr END ====
[2026-03-07 14:14:09]  *** Error codes and diagnostics ***
[2026-03-07 14:14:09]     "exeErrorCode": 0,
[2026-03-07 14:14:09]     "exeErrorDiag": "",
[2026-03-07 14:14:09]     "pilotErrorCode": 0,
[2026-03-07 14:14:09]     "pilotErrorDiag": "",
[2026-03-07 14:14:09]  *** Listing of results directory ***
[2026-03-07 14:14:09] total 465288
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas      5111 Mar  6 20:40 queuedata.json
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas    584627 Mar  6 20:40 pilot3.tar.gz
[2026-03-07 14:14:09] -rwx------ 1 boincer umatlas     36322 Mar  6 20:40 runpilot2-wrapper.sh
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas       100 Mar  7 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 14:14:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar  7 12:50 run_atlas
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas       105 Mar  7 12:50 job.xml
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas 273756628 Mar  7 12:50 EVNT.48958551._000081.pool.root.1
[2026-03-07 14:14:09] drwxrwx--x 2 boincer umatlas      4096 Mar  7 12:50 shared
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas    597942 Mar  7 12:50 input.tar.gz
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 12:50 start_atlas.sh
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas         0 Mar  7 12:50 boinc_lockfile
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas      2517 Mar  7 12:50 pandaJob.out
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas        57 Mar  7 12:50 setup.sh.local
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas    999177 Mar  7 12:50 agis_schedconf.cvmfs.json
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas   1521291 Mar  7 12:50 agis_ddmendpoints.agis.ALL.json
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas       445 Mar  7 12:50 workernode_map.json
[2026-03-07 14:14:09] drwx------ 5 boincer umatlas      4096 Mar  7 12:50 pilot3
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas 196512022 Mar  7 14:13 HITS.48958554._002017.pool.root.1
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas       529 Mar  7 14:13 boinc_task_state.xml
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas      1045 Mar  7 14:13 memory_monitor_summary.json
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas    404506 Mar  7 14:13 log.48958554._002017.job.log.tgz.1
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas        95 Mar  7 14:13 pilot_heartbeat.json
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas      6418 Mar  7 14:13 heartbeat.json
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas      5953 Mar  7 14:13 init_data.xml
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas      8192 Mar  7 14:13 boinc_mmap_file
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas        27 Mar  7 14:13 wrapper_checkpoint.txt
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas       745 Mar  7 14:14 pilotlog.txt
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas    719461 Mar  7 14:14 log.48958554._002017.job.log.1
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas       357 Mar  7 14:14 output.list
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas       620 Mar  7 14:14 runtime_log
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas   1146880 Mar  7 14:14 result.tar.gz
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas      9343 Mar  7 14:14 runtime_log.err
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas       659 Mar  7 14:14 22yNDm1pvI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgMULDmC3kYEn.diag
[2026-03-07 14:14:09] -rw-r--r-- 1 boincer umatlas     21374 Mar  7 14:14 stderr.txt
[2026-03-07 14:14:09] HITS file was successfully produced:
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas 196512022 Mar  7 14:13 shared/HITS.pool.root.1
[2026-03-07 14:14:09]  *** Contents of shared directory: ***
[2026-03-07 14:14:09] total 460976
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas 273756628 Mar  7 12:50 ATLAS.root_0
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas    597942 Mar  7 12:50 input.tar.gz
[2026-03-07 14:14:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 12:50 start_atlas.sh
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas 196512022 Mar  7 14:13 HITS.pool.root.1
[2026-03-07 14:14:09] -rw------- 1 boincer umatlas   1146880 Mar  7 14:14 result.tar.gz
14:14:11 (23663): run_atlas exited; CPU time 53037.877462
14:14:11 (23663): called boinc_finish(0)

</stderr_txt>
]]>

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