Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:56 (2893515): wrapper (7.7.26015): starting
19:10:56 (2893515): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 19:10:56] Arguments: --nthreads 4
[2026-03-07 19:10:56] Threads: 4
[2026-03-07 19:10:56] Checking for CVMFS
[2026-03-07 19:10:56] No cvmfs_config command found, will try listing directly
[2026-03-07 19:10:56] CVMFS is ok
[2026-03-07 19:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 19:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 19:10:56] Further information can be found at the LHC@home message board.
[2026-03-07 19:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:10:56] Checking for apptainer binary...
[2026-03-07 19:10:56] which: no apptainer in ((null))
[2026-03-07 19:10:56] apptainer is not installed, using version from CVMFS
[2026-03-07 19:10:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:10:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 19:10:56] apptainer works
[2026-03-07 19:10:56] Set ATHENA_PROC_NUMBER=4
[2026-03-07 19:10:56] Set ATHENA_CORE_NUMBER=4
[2026-03-07 19:10:56] Starting ATLAS job with PandaID=7044948984
[2026-03-07 19:10:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 20:27:21]  *** The last 200 lines of the pilot log: ***
[2026-03-07 20:27:21]  is_altstaged=None
[2026-03-07 20:27:21]  is_tar=False
[2026-03-07 20:27:21]  lfn=log.48958610._000730.job.log.tgz.1
[2026-03-07 20:27:21]  mtime=0
[2026-03-07 20:27:21]  protocol_id=None
[2026-03-07 20:27:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 20:27:21]  replicas=None
[2026-03-07 20:27:21]  scope=mc23_13p6TeV
[2026-03-07 20:27:21]  status=None
[2026-03-07 20:27:21]  status_code=0
[2026-03-07 20:27:21]  storage_token=
[2026-03-07 20:27:21]  surl=/var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044948984/log.48958610._000730.job.log.tgz.1
[2026-03-07 20:27:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/b9/log.48958610._000730.job.log.tgz.1
[2026-03-07 20:27:21]  workdir=None
[2026-03-07 20:27:21] ]
[2026-03-07 20:27:21] 2026-03-07 19:26:22,911 | INFO     | transferring file log.48958610._000730.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044948984/log.48958610._000730.job.log.tgz.1 to /var/lib/b
[2026-03-07 20:27:21] 2026-03-07 19:26:22,912 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044948984/log.48958610._000730.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/8/lo
[2026-03-07 20:27:21] 2026-03-07 19:26:22,927 | INFO     | adding to output.list: log.48958610._000730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/b9/log.48958610._000730.job.log.tg
[2026-03-07 20:27:21] 2026-03-07 19:26:22,928 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 20:27:21] 2026-03-07 19:26:22,928 | INFO     | summary of transferred files:
[2026-03-07 20:27:21] 2026-03-07 19:26:22,928 | INFO     |  -- lfn=log.48958610._000730.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 20:27:21] 2026-03-07 19:26:22,928 | INFO     | stage-out finished correctly
[2026-03-07 20:27:21] 2026-03-07 19:26:23,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 20:27:21] 2026-03-07 19:26:24,186 | INFO     | time since job start (4516s) is within the limit (349056.0s)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,371 | INFO     | job 7044948984 has state=finished
[2026-03-07 20:27:21] 2026-03-07 19:26:25,371 | INFO     | preparing for final server update for job 7044948984 in state='finished'
[2026-03-07 20:27:21] 2026-03-07 19:26:25,371 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044948984/jobReport.json
[2026-03-07 20:27:21] 2026-03-07 19:26:25,372 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/8/workernode_map.json
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | INFO     | this job has now completed (state=finished)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | INFO     | log transfer has been attempted: DONE
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | INFO     | job 7044948984 has finished - writing final server update
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_82252/.job.ad'
[2026-03-07 20:27:21] 2026-03-07 19:26:25,373 | INFO     | total number of processed events: 400 (read)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,390 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044948984/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,391 | INFO     | extracted standard info from prmon json
[2026-03-07 20:27:21] 2026-03-07 19:26:25,391 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 20:27:21] 2026-03-07 19:26:25,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 20:27:21] 2026-03-07 19:26:25,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 20:27:21] 2026-03-07 19:26:25,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | fitting pss+swap vs Time
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | sum of square deviations: 93240818.0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | sum of deviations: 45898352.0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | mean x: 1772909406.0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | mean y: 2341470.537313433
[2026-03-07 20:27:21] 2026-03-07 19:26:25,392 | INFO     | intersect: -870383820.0183626
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | chi2: 0.00014212421374581945
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | current memory leak: 0.49 B/s (using 67 data points, chi2=0.00)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | could have reported an average CPU frequency of 3630 MHz (6 samples)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | ..............................
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . Timing measurements:
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . get job = 0 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . initial setup = 4 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . payload setup = 4 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . stage-in = 0 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . payload execution = 4495 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . stage-out = 0 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | . log creation = 0 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,393 | INFO     | ..............................
[2026-03-07 20:27:21] 2026-03-07 19:26:25,562 | INFO     | 
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | job summary report
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | --------------------------------------------------
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | PanDA job id: 7044948984
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | task id: 48958610
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | errors: (none)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | pilot state: finished 
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | transexitcode: 0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | exeerrorcode: 0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | exeerrordiag: 
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | exitcode: 0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | exitmsg: OK
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | cpuconsumptiontime: 17186 s
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | nevents: 400
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | neventsw: 0
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | pid: 2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | pgrp: 2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | corecount: 4
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | event service: False
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | sizes: {0: 2295769, 11: 2295769, 4503: 2321949, 4504: 2331025, 4506: 2331163}
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | --------------------------------------------------
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | 
[2026-03-07 20:27:21] 2026-03-07 19:26:25,563 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/8
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | job 7044948984 has completed (purged errors)
[2026-03-07 20:27:21] 2026-03-07 19:26:25,582 | INFO     | overall cleanup function is called
[2026-03-07 20:27:21] 2026-03-07 19:26:26,589 | INFO     | --- collectZombieJob: --- 10, [2904958]
[2026-03-07 20:27:21] 2026-03-07 19:26:26,590 | INFO     | zombie collector waiting for pid 2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:26,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 20:27:21] 2026-03-07 19:26:26,590 | INFO     | collected zombie processes
[2026-03-07 20:27:21] 2026-03-07 19:26:26,590 | INFO     | will attempt to kill all subprocesses of pid=2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:27,004 | INFO     | process IDs to be killed: [2904958] (in reverse order)
[2026-03-07 20:27:21] 2026-03-07 19:26:27,224 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 20:27:21] 2026-03-07 19:26:27,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 20:27:21] 2026-03-07 19:26:27,252 | INFO     | did not find any defunct processes belonging to 2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:27,284 | INFO     | did not find any defunct processes belonging to 2904958
[2026-03-07 20:27:21] 2026-03-07 19:26:27,284 | INFO     | ready for new job
[2026-03-07 20:27:21] 2026-03-07 19:26:27,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 20:27:21] 2026-03-07 19:26:27,285 | INFO     | **************************************
[2026-03-07 20:27:21] 2026-03-07 19:26:27,286 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 20:27:21] 2026-03-07 19:26:27,286 | INFO     | **************************************
[2026-03-07 20:27:21] 2026-03-07 19:26:27,286 | INFO     | 
[2026-03-07 20:27:21] 2026-03-07 19:26:27,291 | INFO     | architecture information:
[2026-03-07 20:27:21] 2026-03-07 19:26:27,292 | INFO     | executing command: cat /etc/os-release
[2026-03-07 20:27:21] 2026-03-07 19:26:27,307 | INFO     | cat /etc/os-release:
[2026-03-07 20:27:21] NAME="CentOS Linux"
[2026-03-07 20:27:21] VERSION="7 (Core)"
[2026-03-07 20:27:21] ID="centos"
[2026-03-07 20:27:21] ID_LIKE="rhel fedora"
[2026-03-07 20:27:21] VERSION_ID="7"
[2026-03-07 20:27:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 20:27:21] ANSI_COLOR="0;31"
[2026-03-07 20:27:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 20:27:21] HOME_URL="https://www.centos.org/"
[2026-03-07 20:27:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 20:27:21] 
[2026-03-07 20:27:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 20:27:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 20:27:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 20:27:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 20:27:21] 
[2026-03-07 20:27:21] 2026-03-07 19:26:27,307 | INFO     | **************************************
[2026-03-07 20:27:21] 2026-03-07 19:26:27,810 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/8
[2026-03-07 20:27:21] 2026-03-07 19:26:27,825 | INFO     | sufficient remaining disk space (19927138304 B)
[2026-03-07 20:27:21] 2026-03-07 19:26:27,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 20:27:21] 2026-03-07 19:26:27,825 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 20:27:21] 2026-03-07 19:26:27,825 | INFO     | update_server=False
[2026-03-07 20:27:21] 2026-03-07 19:26:27,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 20:27:21] 2026-03-07 19:26:27,901 | WARNING  | process 2904958 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 20:27:21] 2026-03-07 19:26:28,190 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 20:27:21] 2026-03-07 19:26:28,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 20:27:21] 2026-03-07 19:26:28,610 | INFO     | number of running child processes to parent process 2904958: 1
[2026-03-07 20:27:21] 2026-03-07 19:26:28,610 | INFO     | maximum number of monitored processes: 6
[2026-03-07 20:27:21] 2026-03-07 19:26:28,610 | INFO     | aborting job monitoring since job object (job id=7044948984) has expired
[2026-03-07 20:27:21] 2026-03-07 19:26:28,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 20:27:21] 2026-03-07 19:26:28,610 | INFO     | will abort loop
[2026-03-07 20:27:21] 2026-03-07 19:26:28,732 | INFO     | all payload control threads have been joined
[2026-03-07 20:27:21] 2026-03-07 19:26:28,829 | INFO     | [job] retrieve thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:28,896 | INFO     | all data control threads have been joined
[2026-03-07 20:27:21] 2026-03-07 19:26:28,938 | INFO     | [payload] failed_post thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 20:27:21] 2026-03-07 19:26:29,451 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,506 | INFO     | all job control threads have been joined
[2026-03-07 20:27:21] 2026-03-07 19:26:29,537 | INFO     | [job] validate thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,614 | INFO     | [job] job monitor thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,718 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,737 | INFO     | [payload] control thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,777 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,898 | INFO     | [payload] validate_post thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,901 | INFO     | [data] control thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:29,926 | INFO     | [data] copytool_in thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:30,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 20:27:21] 2026-03-07 19:26:30,485 | INFO     | [data] copytool_out thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:30,511 | INFO     | [job] control thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:31,457 | INFO     | [job] queue monitor thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:33,144 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:38,646 | INFO     | job.realtimelogging is not enabled
[2026-03-07 20:27:21] 2026-03-07 19:26:39,651 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 20:27:21] 2026-03-07 19:26:57,752 | INFO     | PID=2898103 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 20:27:21] 2026-03-07 19:26:57,752 | INFO     | .. there are 51 such processes running
[2026-03-07 20:27:21] 2026-03-07 19:26:57,756 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 20:27:21] 2026-03-07 19:26:57,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 20:27:21] 2026-03-07 19:26:57,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 20:27:21] 2026-03-07 19:27:15,070 | INFO     | [monitor] cgroup control has ended
[2026-03-07 20:27:21] 2026-03-07 19:27:15,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22827911300928)>', '<ExcThread(monitor, started 22827674912512)>']
[2026-03-07 20:27:21] 2026-03-07 19:27:16,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 20:27:21] 2026-03-07 19:27:16,850 | INFO     | [monitor] control thread has ended
[2026-03-07 20:27:21] 2026-03-07 19:27:20,954 | INFO     | all workflow threads have been joined
[2026-03-07 20:27:21] 2026-03-07 19:27:20,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 20:27:21] 2026-03-07 19:27:20,955 | INFO     | traces error code: 0
[2026-03-07 20:27:21] 2026-03-07 19:27:20,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 20:27:21] 2026-03-07 19:27:21,070 [wrapper] ==== pilot stdout END ====
[2026-03-07 20:27:21] 2026-03-07 19:27:21,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 20:27:21] 2026-03-07 19:27:21,075 [wrapper] pilotpid: 2898103
[2026-03-07 20:27:21] 2026-03-07 19:27:21,077 [wrapper] Pilot exit status: 0
[2026-03-07 20:27:21] 2026-03-07 19:27:21,086 [wrapper] pandaids: 7044948984
[2026-03-07 20:27:21] 2026-03-07 19:27:21,202 [wrapper] cleanup supervisor_pilot 3582562 2898104
[2026-03-07 20:27:21] 2026-03-07 19:27:21,206 [wrapper] Test setup, not cleaning
[2026-03-07 20:27:21] 2026-03-07 19:27:21,208 [wrapper] apfmon messages muted
[2026-03-07 20:27:21] 2026-03-07 19:27:21,211 [wrapper] ==== wrapper stdout END ====
[2026-03-07 20:27:21] 2026-03-07 19:27:21,213 [wrapper] ==== wrapper stderr END ====
[2026-03-07 20:27:21]  *** Error codes and diagnostics ***
[2026-03-07 20:27:21]     "exeErrorCode": 0,
[2026-03-07 20:27:21]     "exeErrorDiag": "",
[2026-03-07 20:27:21]     "pilotErrorCode": 0,
[2026-03-07 20:27:21]     "pilotErrorDiag": "",
[2026-03-07 20:27:21]  *** Listing of results directory ***
[2026-03-07 20:27:21] total 430752
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:56 pilot3.tar.gz
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc      5111 Mar  7 13:00 queuedata.json
[2026-03-07 20:27:21] -rwx------. 1 boinc boinc     36322 Mar  7 13:00 runpilot2-wrapper.sh
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 20:27:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:10 run_atlas
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:10 job.xml
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc      6703 Mar  7 19:10 init_data.xml
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc 258338751 Mar  7 19:10 EVNT.48958608._000030.pool.root.1
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:10 start_atlas.sh
[2026-03-07 20:27:21] drwxrwx--x. 2 boinc boinc      4096 Mar  7 19:10 shared
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc    597936 Mar  7 19:10 input.tar.gz
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:10 boinc_lockfile
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc      2525 Mar  7 19:10 pandaJob.out
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc    999177 Mar  7 19:11 agis_schedconf.cvmfs.json
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc   1521291 Mar  7 19:11 agis_ddmendpoints.agis.ALL.json
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc       444 Mar  7 19:11 workernode_map.json
[2026-03-07 20:27:21] drwx------. 5 boinc boinc      4096 Mar  7 19:11 pilot3
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc 176969294 Mar  7 20:25 HITS.48958610._000730.pool.root.1
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc       530 Mar  7 20:26 boinc_task_state.xml
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc      1029 Mar  7 20:26 memory_monitor_summary.json
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc    253295 Mar  7 20:26 log.48958610._000730.job.log.tgz.1
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc      6341 Mar  7 20:26 heartbeat.json
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc        95 Mar  7 20:26 pilot_heartbeat.json
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc      8192 Mar  7 20:27 boinc_mmap_file
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc        27 Mar  7 20:27 wrapper_checkpoint.txt
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc      5433 Mar  7 20:27 pilotlog.txt
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc    669369 Mar  7 20:27 log.48958610._000730.job.log.1
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc       357 Mar  7 20:27 output.list
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc       620 Mar  7 20:27 runtime_log
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc    942080 Mar  7 20:27 result.tar.gz
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc      9204 Mar  7 20:27 runtime_log.err
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc       662 Mar  7 20:27 LguMDmJV5I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmelVLDmtrMCPo.diag
[2026-03-07 20:27:21] -rw-r--r--. 1 boinc boinc     21330 Mar  7 20:27 stderr.txt
[2026-03-07 20:27:21] HITS file was successfully produced:
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc 176969294 Mar  7 20:25 shared/HITS.pool.root.1
[2026-03-07 20:27:21]  *** Contents of shared directory: ***
[2026-03-07 20:27:21] total 426636
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc 258338751 Mar  7 19:10 ATLAS.root_0
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:10 start_atlas.sh
[2026-03-07 20:27:21] -rw-r--r--. 2 boinc boinc    597936 Mar  7 19:10 input.tar.gz
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc 176969294 Mar  7 20:25 HITS.pool.root.1
[2026-03-07 20:27:21] -rw-------. 1 boinc boinc    942080 Mar  7 20:27 result.tar.gz
20:27:22 (2893515): run_atlas exited; CPU time 17348.687109
20:27:22 (2893515): called boinc_finish(0)

</stderr_txt>
]]>

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