Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:47:54 (1412780): wrapper (7.7.26015): starting
20:47:54 (1412780): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 20:47:54] Arguments: --nthreads 4
[2026-03-08 20:47:54] Threads: 4
[2026-03-08 20:47:54] Checking for CVMFS
[2026-03-08 20:47:54] No cvmfs_config command found, will try listing directly
[2026-03-08 20:47:54] CVMFS is ok
[2026-03-08 20:47:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 20:47:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 20:47:54] Further information can be found at the LHC@home message board.
[2026-03-08 20:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 20:47:54] Checking for apptainer binary...
[2026-03-08 20:47:54] which: no apptainer in ((null))
[2026-03-08 20:47:54] apptainer is not installed, using version from CVMFS
[2026-03-08 20:47:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 20:47:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-08 20:47:54] apptainer works
[2026-03-08 20:47:54] Set ATHENA_PROC_NUMBER=4
[2026-03-08 20:47:54] Set ATHENA_CORE_NUMBER=4
[2026-03-08 20:47:54] Starting ATLAS job with PandaID=7045203333
[2026-03-08 20:47:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 23:50:32]  *** The last 200 lines of the pilot log: ***
[2026-03-08 23:50:32] 2026-03-08 22:49:45,016 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 23:50:32] 2026-03-08 22:49:45,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 23:50:32] 2026-03-08 22:49:45,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 23:50:32] 2026-03-08 22:49:45,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 23:50:32] 2026-03-08 22:49:45,018 | INFO     | fitting pss+swap vs Time
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | sum of square deviations: 1778377530.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | sum of deviations: 8776717453.999987
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | mean x: 1773004736.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | mean y: 2311436.748603352
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | intersect: -8747889996.844543
[2026-03-08 23:50:32] 2026-03-08 22:49:45,019 | INFO     | chi2: 1.9205170225044468
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | sum of square deviations: 1633472487.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | sum of deviations: 19591139816.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | mean x: 1773004583.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | mean y: 2322546.7413793104
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | intersect: -21262302940.64924
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | chi2: 1.100631299865685
[2026-03-08 23:50:32] 2026-03-08 22:49:45,020 | INFO     | current chi2=1.100631299865685 (change=42.690885476744754 %)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | sum of square deviations: 1496660620.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | sum of deviations: 18815641113.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | mean x: 1773004431.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | mean y: 2321682.0887573967
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | intersect: -22287444360.833366
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | chi2: 1.1013416856198923
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | current chi2=1.1013416856198923 (change=-0.06454348102710906 %)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | right removable region: 168
[2026-03-08 23:50:32] 2026-03-08 22:49:45,021 | INFO     | sum of square deviations: 1633472487.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | sum of deviations: -8547882816.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | mean x: 1773004888.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | mean y: 2329341.764367816
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | intersect: 9280378489.182072
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | chi2: 0.8397463102181391
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | current chi2=0.8397463102181391 (change=56.274987392557996 %)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,022 | INFO     | sum of square deviations: 1496660620.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | sum of deviations: -8813650331.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | mean x: 1773005041.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | mean y: 2329636.798816568
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | intersect: 10443338278.072695
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | chi2: 0.8399424229278338
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | current chi2=0.8399424229278338 (change=-0.02335380427498749 %)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | left removable region: 20
[2026-03-08 23:50:32] 2026-03-08 22:49:45,023 | INFO     | sum of square deviations: 1005179777.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | sum of deviations: 1319777944.0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | mean x: 1773005010.5
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | mean y: 2341967.7027027025
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | intersect: -2325572860.07381
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | chi2: 0.00015326642874600904
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | current memory leak: 1.31 B/s (using 148 data points, chi2=0.00)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | could have reported an average CPU frequency of 3599 MHz (10 samples)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | ..............................
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . Timing measurements:
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . get job = 0 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . initial setup = 4 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . payload setup = 4 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . stage-in = 0 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . payload execution = 10875 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,024 | INFO     | . stage-out = 0 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,025 | INFO     | . log creation = 0 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,025 | INFO     | ..............................
[2026-03-08 23:50:32] 2026-03-08 22:49:45,065 | INFO     | 
[2026-03-08 23:50:32] 2026-03-08 22:49:45,065 | INFO     | job summary report
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | --------------------------------------------------
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | PanDA job id: 7045203333
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | task id: 48967059
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | errors: (none)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | pilot state: finished 
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | transexitcode: 0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | exeerrorcode: 0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | exeerrordiag: 
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | exitcode: 0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | exitmsg: OK
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | cpuconsumptiontime: 42211 s
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | nevents: 400
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | neventsw: 0
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | pid: 1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | pgrp: 1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | corecount: 4
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | event service: False
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | sizes: {0: 2280176, 11: 2280176, 10884: 2318291, 10887: 2318429}
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | --------------------------------------------------
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | 
[2026-03-08 23:50:32] 2026-03-08 22:49:45,066 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-08 23:50:32] 2026-03-08 22:49:45,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | job 7045203333 has completed (purged errors)
[2026-03-08 23:50:32] 2026-03-08 22:49:45,086 | INFO     | overall cleanup function is called
[2026-03-08 23:50:32] 2026-03-08 22:49:45,510 | WARNING  | process 1423399 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 23:50:32] 2026-03-08 22:49:45,845 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 23:50:32] 2026-03-08 22:49:46,093 | INFO     | --- collectZombieJob: --- 10, [1423399]
[2026-03-08 23:50:32] 2026-03-08 22:49:46,094 | INFO     | zombie collector waiting for pid 1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:46,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 23:50:32] 2026-03-08 22:49:46,094 | INFO     | collected zombie processes
[2026-03-08 23:50:32] 2026-03-08 22:49:46,094 | INFO     | will attempt to kill all subprocesses of pid=1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:46,801 | INFO     | number of running child processes to parent process 1423399: 1
[2026-03-08 23:50:32] 2026-03-08 22:49:46,802 | INFO     | maximum number of monitored processes: 6
[2026-03-08 23:50:32] 2026-03-08 22:49:46,802 | INFO     | aborting job monitoring since job object (job id=7045203333) has expired
[2026-03-08 23:50:32] 2026-03-08 22:49:47,003 | INFO     | process IDs to be killed: [1423399] (in reverse order)
[2026-03-08 23:50:32] 2026-03-08 22:49:47,241 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 23:50:32] 2026-03-08 22:49:47,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 23:50:32] 2026-03-08 22:49:47,270 | INFO     | did not find any defunct processes belonging to 1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:47,299 | INFO     | did not find any defunct processes belonging to 1423399
[2026-03-08 23:50:32] 2026-03-08 22:49:47,300 | INFO     | ready for new job
[2026-03-08 23:50:32] 2026-03-08 22:49:47,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 23:50:32] 2026-03-08 22:49:47,301 | INFO     | **************************************
[2026-03-08 23:50:32] 2026-03-08 22:49:47,301 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 23:50:32] 2026-03-08 22:49:47,301 | INFO     | **************************************
[2026-03-08 23:50:32] 2026-03-08 22:49:47,301 | INFO     | 
[2026-03-08 23:50:32] 2026-03-08 22:49:47,307 | INFO     | architecture information:
[2026-03-08 23:50:32] 2026-03-08 22:49:47,308 | INFO     | executing command: cat /etc/os-release
[2026-03-08 23:50:32] 2026-03-08 22:49:47,322 | INFO     | cat /etc/os-release:
[2026-03-08 23:50:32] NAME="CentOS Linux"
[2026-03-08 23:50:32] VERSION="7 (Core)"
[2026-03-08 23:50:32] ID="centos"
[2026-03-08 23:50:32] ID_LIKE="rhel fedora"
[2026-03-08 23:50:32] VERSION_ID="7"
[2026-03-08 23:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 23:50:32] ANSI_COLOR="0;31"
[2026-03-08 23:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 23:50:32] HOME_URL="https://www.centos.org/"
[2026-03-08 23:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 23:50:32] 
[2026-03-08 23:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 23:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 23:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 23:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 23:50:32] 
[2026-03-08 23:50:32] 2026-03-08 22:49:47,322 | INFO     | **************************************
[2026-03-08 23:50:32] 2026-03-08 22:49:47,825 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | INFO     | sufficient remaining disk space (20844642304 B)
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | INFO     | update_server=False
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 23:50:32] 2026-03-08 22:49:47,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 23:50:32] 2026-03-08 22:49:47,843 | INFO     | aborting loop
[2026-03-08 23:50:32] 2026-03-08 22:49:48,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 23:50:32] 2026-03-08 22:49:48,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 23:50:32] 2026-03-08 22:49:48,847 | INFO     | [job] retrieve thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:48,848 | INFO     | [job] job monitor thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:48,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:48,895 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:48,937 | INFO     | all data control threads have been joined
[2026-03-08 23:50:32] 2026-03-08 22:49:48,942 | INFO     | [data] copytool_in thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:49,202 | INFO     | all payload control threads have been joined
[2026-03-08 23:50:32] 2026-03-08 22:49:49,356 | INFO     | [payload] validate_post thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:49,399 | INFO     | all job control threads have been joined
[2026-03-08 23:50:32] 2026-03-08 22:49:49,402 | INFO     | [payload] failed_post thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:49,943 | INFO     | [data] control thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:49,978 | INFO     | [job] validate thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:50,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 23:50:32] 2026-03-08 22:49:50,208 | INFO     | [payload] control thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:50,234 | INFO     | [data] copytool_out thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:50,326 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:50,405 | INFO     | [job] control thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:51,083 | INFO     | [job] queue monitor thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:52,782 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:49:58,710 | INFO     | job.realtimelogging is not enabled
[2026-03-08 23:50:32] 2026-03-08 22:49:59,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 23:50:32] 2026-03-08 22:50:18,040 | INFO     | PID=1417410 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 23:50:32] 2026-03-08 22:50:18,041 | INFO     | .. there are 48 such processes running
[2026-03-08 23:50:32] 2026-03-08 22:50:18,041 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 23:50:32] 2026-03-08 22:50:18,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 23:50:32] 2026-03-08 22:50:18,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 23:50:32] 2026-03-08 22:50:24,669 | INFO     | [monitor] cgroup control has ended
[2026-03-08 23:50:32] 2026-03-08 22:50:26,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22919572662080)>', '<ExcThread(monitor, started 22919333029632)>']
[2026-03-08 23:50:32] 2026-03-08 22:50:27,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 23:50:32] 2026-03-08 22:50:27,087 | INFO     | [monitor] control thread has ended
[2026-03-08 23:50:32] 2026-03-08 22:50:31,684 | INFO     | all workflow threads have been joined
[2026-03-08 23:50:32] 2026-03-08 22:50:31,684 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 23:50:32] 2026-03-08 22:50:31,684 | INFO     | traces error code: 0
[2026-03-08 23:50:32] 2026-03-08 22:50:31,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 23:50:32] 2026-03-08 22:50:31,912 [wrapper] ==== pilot stdout END ====
[2026-03-08 23:50:32] 2026-03-08 22:50:31,913 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 23:50:32] 2026-03-08 22:50:31,916 [wrapper] pilotpid: 1417410
[2026-03-08 23:50:32] 2026-03-08 22:50:31,918 [wrapper] Pilot exit status: 0
[2026-03-08 23:50:32] 2026-03-08 22:50:31,924 [wrapper] pandaids: 7045203333
[2026-03-08 23:50:32] 2026-03-08 22:50:32,057 [wrapper] cleanup supervisor_pilot 2993218 1417411
[2026-03-08 23:50:32] 2026-03-08 22:50:32,061 [wrapper] Test setup, not cleaning
[2026-03-08 23:50:32] 2026-03-08 22:50:32,063 [wrapper] apfmon messages muted
[2026-03-08 23:50:32] 2026-03-08 22:50:32,065 [wrapper] ==== wrapper stdout END ====
[2026-03-08 23:50:32] 2026-03-08 22:50:32,068 [wrapper] ==== wrapper stderr END ====
[2026-03-08 23:50:32]  *** Error codes and diagnostics ***
[2026-03-08 23:50:32]     "exeErrorCode": 0,
[2026-03-08 23:50:32]     "exeErrorDiag": "",
[2026-03-08 23:50:32]     "pilotErrorCode": 0,
[2026-03-08 23:50:32]     "pilotErrorDiag": "",
[2026-03-08 23:50:32]  *** Listing of results directory ***
[2026-03-08 23:50:32] total 486424
[2026-03-08 23:50:32] -rwx------. 1 boinc boinc     36322 Mar  7 17:24 runpilot2-wrapper.sh
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc    584627 Mar  7 17:25 pilot3.tar.gz
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc      5111 Mar  7 17:25 queuedata.json
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc       100 Mar  8 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 23:50:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 20:47 run_atlas
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc       105 Mar  8 20:47 job.xml
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc      6706 Mar  8 20:47 init_data.xml
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc 225462638 Mar  8 20:47 EVNT.48967057._000062.pool.root.1
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 20:47 start_atlas.sh
[2026-03-08 23:50:32] drwxrwx--x. 2 boinc boinc      4096 Mar  8 20:47 shared
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc    597945 Mar  8 20:47 input.tar.gz
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc         0 Mar  8 20:47 boinc_lockfile
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc      2549 Mar  8 20:47 pandaJob.out
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc    999108 Mar  8 20:48 agis_schedconf.cvmfs.json
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc       443 Mar  8 20:48 workernode_map.json
[2026-03-08 23:50:32] drwx------. 5 boinc boinc      4096 Mar  8 20:48 pilot3
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc 264930492 Mar  8 23:49 HITS.48967059._002082.pool.root.1
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc        95 Mar  8 23:49 pilot_heartbeat.json
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc       530 Mar  8 23:49 boinc_task_state.xml
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc      1031 Mar  8 23:49 memory_monitor_summary.json
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc   1511578 Mar  8 23:49 agis_ddmendpoints.agis.ALL.json
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc    349335 Mar  8 23:49 log.48967059._002082.job.log.tgz.1
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc      6356 Mar  8 23:49 heartbeat.json
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc      8192 Mar  8 23:50 boinc_mmap_file
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc        28 Mar  8 23:50 wrapper_checkpoint.txt
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc      4902 Mar  8 23:50 pilotlog.txt
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc   1537340 Mar  8 23:50 log.48967059._002082.job.log.1
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc       357 Mar  8 23:50 output.list
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc       620 Mar  8 23:50 runtime_log
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc   1904640 Mar  8 23:50 result.tar.gz
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc      9205 Mar  8 23:50 runtime_log.err
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc       665 Mar  8 23:50 GvFLDmgd9I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyNWLDmupBlHn.diag
[2026-03-08 23:50:32] -rw-r--r--. 1 boinc boinc     20808 Mar  8 23:50 stderr.txt
[2026-03-08 23:50:32] HITS file was successfully produced:
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc 264930492 Mar  8 23:49 shared/HITS.pool.root.1
[2026-03-08 23:50:32]  *** Contents of shared directory: ***
[2026-03-08 23:50:32] total 481372
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc 225462638 Mar  8 20:47 ATLAS.root_0
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 20:47 start_atlas.sh
[2026-03-08 23:50:32] -rw-r--r--. 2 boinc boinc    597945 Mar  8 20:47 input.tar.gz
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc 264930492 Mar  8 23:49 HITS.pool.root.1
[2026-03-08 23:50:32] -rw-------. 1 boinc boinc   1904640 Mar  8 23:50 result.tar.gz
23:50:33 (1412780): run_atlas exited; CPU time 42738.069724
23:50:33 (1412780): called boinc_finish(0)

</stderr_txt>
]]>

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