Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:18 (1251145): wrapper (7.7.26015): starting
08:00:18 (1251145): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 08:00:18] Arguments: --nthreads 4
[2026-03-08 08:00:18] Threads: 4
[2026-03-08 08:00:18] Checking for CVMFS
[2026-03-08 08:00:18] No cvmfs_config command found, will try listing directly
[2026-03-08 08:00:18] CVMFS is ok
[2026-03-08 08:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 08:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 08:00:18] Further information can be found at the LHC@home message board.
[2026-03-08 08:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 08:00:18] Checking for apptainer binary...
[2026-03-08 08:00:18] which: no apptainer in ((null))
[2026-03-08 08:00:18] apptainer is not installed, using version from CVMFS
[2026-03-08 08:00:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 08:00:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-08 08:00:19] apptainer works
[2026-03-08 08:00:19] Set ATHENA_PROC_NUMBER=4
[2026-03-08 08:00:19] Set ATHENA_CORE_NUMBER=4
[2026-03-08 08:00:19] Starting ATLAS job with PandaID=7044961520
[2026-03-08 08:00:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 09:46:27]  *** The last 200 lines of the pilot log: ***
[2026-03-08 09:46:27] 2026-03-08 08:45:21,472 | INFO     | chi2: 1.0979574170090205
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | current chi2=1.0979574170090205 (change=-0.14981687690779544 %)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | right removable region: 96
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | sum of square deviations: 282974608.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | sum of deviations: 1313260216.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | mean x: 1772956549.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | mean y: 2319976.030927835
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | intersect: -8225815109.85054
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | chi2: 0.0006767506342519987
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | current chi2=0.0006767506342519987 (change=99.93827041828608 %)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | sum of square deviations: 241429643.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | sum of deviations: 842852982.0000001
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | mean x: 1772956701.5
[2026-03-08 09:46:27] 2026-03-08 08:45:21,473 | INFO     | mean y: 2321700.1304347827
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | intersect: -6187232425.23502
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | chi2: 0.00025819534002084684
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | current chi2=0.00025819534002084684 (change=61.84778750799017 %)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | sum of square deviations: 204163828.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | sum of deviations: 565962331.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | mean x: 1772956854.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | mean y: 2322822.83908046
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | intersect: -4912488991.19228
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | chi2: 9.228792570234249e-05
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | current chi2=9.228792570234249e-05 (change=64.25654866780665 %)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | sum of square deviations: 170944600.5
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | sum of deviations: 424932191.49999994
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | mean x: 1772957006.5
[2026-03-08 09:46:27] 2026-03-08 08:45:21,474 | INFO     | mean y: 2323468.9146341463
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | intersect: -4404873389.036575
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | chi2: 7.466209648638129e-05
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | current chi2=7.466209648638129e-05 (change=19.098738087157827 %)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | left removable region: 40
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | sum of square deviations: 54438230.0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | sum of deviations: 62788916.5
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | mean x: 1772957433.5
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | mean y: 2324918.910714286
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | intersect: -2042599691.0570564
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | chi2: 1.34981142003938e-05
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | current memory leak: 1.15 B/s (using 56 data points, chi2=0.00)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | could have reported an average CPU frequency of 3560 MHz (7 samples)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | ..............................
[2026-03-08 09:46:27] 2026-03-08 08:45:21,475 | INFO     | . Timing measurements:
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . get job = 0 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . initial setup = 18 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . payload setup = 18 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . stage-in = 0 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . payload execution = 6215 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . stage-out = 0 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | . log creation = 0 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,476 | INFO     | ..............................
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | 
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | job summary report
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | --------------------------------------------------
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | PanDA job id: 7044961520
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | task id: 48966988
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | errors: (none)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | pilot state: finished 
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | transexitcode: 0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | exeerrorcode: 0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | exeerrordiag: 
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | exitcode: 0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | exitmsg: OK
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | cpuconsumptiontime: 23784 s
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | nevents: 400
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | neventsw: 0
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | pid: 1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | pgrp: 1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | corecount: 4
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | event service: False
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | sizes: {0: 2295857, 11: 2295857, 6237: 2322614, 6238: 2331828}
[2026-03-08 09:46:27] 2026-03-08 08:45:21,787 | INFO     | --------------------------------------------------
[2026-03-08 09:46:27] 2026-03-08 08:45:21,788 | INFO     | 
[2026-03-08 09:46:27] 2026-03-08 08:45:21,788 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/9
[2026-03-08 09:46:27] 2026-03-08 08:45:21,804 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | job 7044961520 has completed (purged errors)
[2026-03-08 09:46:27] 2026-03-08 08:45:21,805 | INFO     | overall cleanup function is called
[2026-03-08 09:46:27] 2026-03-08 08:45:22,812 | INFO     | --- collectZombieJob: --- 10, [1269873]
[2026-03-08 09:46:27] 2026-03-08 08:45:22,812 | INFO     | zombie collector waiting for pid 1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:22,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 09:46:27] 2026-03-08 08:45:22,812 | INFO     | collected zombie processes
[2026-03-08 09:46:27] 2026-03-08 08:45:22,812 | INFO     | will attempt to kill all subprocesses of pid=1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:23,285 | INFO     | process IDs to be killed: [1269873] (in reverse order)
[2026-03-08 09:46:27] 2026-03-08 08:45:23,505 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 09:46:27] 2026-03-08 08:45:23,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 09:46:27] 2026-03-08 08:45:23,536 | INFO     | did not find any defunct processes belonging to 1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:23,565 | INFO     | did not find any defunct processes belonging to 1269873
[2026-03-08 09:46:27] 2026-03-08 08:45:23,566 | INFO     | ready for new job
[2026-03-08 09:46:27] 2026-03-08 08:45:23,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 09:46:27] 2026-03-08 08:45:23,567 | INFO     | **************************************
[2026-03-08 09:46:27] 2026-03-08 08:45:23,567 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 09:46:27] 2026-03-08 08:45:23,567 | INFO     | **************************************
[2026-03-08 09:46:27] 2026-03-08 08:45:23,567 | INFO     | 
[2026-03-08 09:46:27] 2026-03-08 08:45:23,573 | INFO     | architecture information:
[2026-03-08 09:46:27] 2026-03-08 08:45:23,574 | INFO     | executing command: cat /etc/os-release
[2026-03-08 09:46:27] 2026-03-08 08:45:23,591 | INFO     | cat /etc/os-release:
[2026-03-08 09:46:27] NAME="CentOS Linux"
[2026-03-08 09:46:27] VERSION="7 (Core)"
[2026-03-08 09:46:27] ID="centos"
[2026-03-08 09:46:27] ID_LIKE="rhel fedora"
[2026-03-08 09:46:27] VERSION_ID="7"
[2026-03-08 09:46:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 09:46:27] ANSI_COLOR="0;31"
[2026-03-08 09:46:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 09:46:27] HOME_URL="https://www.centos.org/"
[2026-03-08 09:46:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 09:46:27] 
[2026-03-08 09:46:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 09:46:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 09:46:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 09:46:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 09:46:27] 
[2026-03-08 09:46:27] 2026-03-08 08:45:23,591 | INFO     | **************************************
[2026-03-08 09:46:27] 2026-03-08 08:45:24,094 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/9
[2026-03-08 09:46:27] 2026-03-08 08:45:24,109 | INFO     | sufficient remaining disk space (20443037696 B)
[2026-03-08 09:46:27] 2026-03-08 08:45:24,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 09:46:27] 2026-03-08 08:45:24,109 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 09:46:27] 2026-03-08 08:45:24,109 | INFO     | update_server=False
[2026-03-08 09:46:27] 2026-03-08 08:45:24,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 09:46:27] 2026-03-08 08:45:24,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 09:46:27] 2026-03-08 08:45:24,516 | INFO     | all job control threads have been joined
[2026-03-08 09:46:27] 2026-03-08 08:45:24,634 | WARNING  | process 1269873 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 09:46:27] 2026-03-08 08:45:24,638 | INFO     | all data control threads have been joined
[2026-03-08 09:46:27] 2026-03-08 08:45:24,961 | INFO     | using path: /var/lib/boinc/var/slot60/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:46:27] 2026-03-08 08:45:24,961 | INFO     | using path: /var/lib/boinc/var/slot60/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:46:27] 2026-03-08 08:45:24,962 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 09:46:27] 2026-03-08 08:45:24,962 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 09:46:27] 2026-03-08 08:45:24,962 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7044961520/payload.stdout) since it has not been created yet
[2026-03-08 09:46:27] 2026-03-08 08:45:24,962 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/9
[2026-03-08 09:46:27] 2026-03-08 08:45:24,975 | INFO     | sufficient remaining disk space (20443037696 B)
[2026-03-08 09:46:27] 2026-03-08 08:45:24,975 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 09:46:27] 2026-03-08 08:45:24,975 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7044961520/HITS.48966988._014000.pool.root.1 since it does not exist
[2026-03-08 09:46:27] 2026-03-08 08:45:25,119 | INFO     | [job] retrieve thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,305 | INFO     | all payload control threads have been joined
[2026-03-08 09:46:27] 2026-03-08 08:45:25,468 | INFO     | number of running child processes to parent process 1269873: 1
[2026-03-08 09:46:27] 2026-03-08 08:45:25,468 | INFO     | maximum number of monitored processes: 6
[2026-03-08 09:46:27] 2026-03-08 08:45:25,469 | INFO     | aborting job monitoring since job object (job id=7044961520) has expired
[2026-03-08 09:46:27] 2026-03-08 08:45:25,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:46:27] 2026-03-08 08:45:25,469 | INFO     | will abort loop
[2026-03-08 09:46:27] 2026-03-08 08:45:25,505 | INFO     | [payload] failed_post thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,521 | INFO     | [job] control thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,523 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,643 | INFO     | [data] control thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,763 | INFO     | [job] validate thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,832 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:25,853 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,199 | INFO     | [payload] validate_post thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,304 | INFO     | [data] copytool_in thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,310 | INFO     | [payload] control thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,408 | INFO     | [data] copytool_out thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,474 | INFO     | [job] job monitor thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:26,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:46:27] 2026-03-08 08:45:27,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 09:46:27] 2026-03-08 08:45:27,542 | INFO     | [job] queue monitor thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:31,458 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:34,775 | INFO     | job.realtimelogging is not enabled
[2026-03-08 09:46:27] 2026-03-08 08:45:35,780 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 09:46:27] 2026-03-08 08:45:53,181 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-08 09:46:27] 2026-03-08 08:45:54,324 | INFO     | PID=1256422 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 09:46:27] 2026-03-08 08:45:54,324 | INFO     | .. there are 50 such processes running
[2026-03-08 09:46:27] 2026-03-08 08:45:54,324 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 09:46:27] 2026-03-08 08:45:54,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 09:46:27] 2026-03-08 08:45:54,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 09:46:27] 2026-03-08 08:46:21,829 | INFO     | [monitor] cgroup control has ended
[2026-03-08 09:46:27] 2026-03-08 08:46:22,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22846064838464)>', '<ExcThread(monitor, started 22845813147392)>']
[2026-03-08 09:46:27] 2026-03-08 08:46:22,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 09:46:27] 2026-03-08 08:46:22,467 | INFO     | [monitor] control thread has ended
[2026-03-08 09:46:27] 2026-03-08 08:46:27,271 | INFO     | all workflow threads have been joined
[2026-03-08 09:46:27] 2026-03-08 08:46:27,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 09:46:27] 2026-03-08 08:46:27,272 | INFO     | traces error code: 0
[2026-03-08 09:46:27] 2026-03-08 08:46:27,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 09:46:27] 2026-03-08 08:46:27,404 [wrapper] ==== pilot stdout END ====
[2026-03-08 09:46:27] 2026-03-08 08:46:27,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 09:46:27] 2026-03-08 08:46:27,409 [wrapper] pilotpid: 1256422
[2026-03-08 09:46:27] 2026-03-08 08:46:27,411 [wrapper] Pilot exit status: 0
[2026-03-08 09:46:27] 2026-03-08 08:46:27,419 [wrapper] pandaids: 7044961520
[2026-03-08 09:46:27] 2026-03-08 08:46:27,549 [wrapper] cleanup supervisor_pilot 2228945 1256423
[2026-03-08 09:46:27] 2026-03-08 08:46:27,552 [wrapper] Test setup, not cleaning
[2026-03-08 09:46:27] 2026-03-08 08:46:27,555 [wrapper] apfmon messages muted
[2026-03-08 09:46:27] 2026-03-08 08:46:27,557 [wrapper] ==== wrapper stdout END ====
[2026-03-08 09:46:27] 2026-03-08 08:46:27,562 [wrapper] ==== wrapper stderr END ====
[2026-03-08 09:46:27]  *** Error codes and diagnostics ***
[2026-03-08 09:46:27]     "exeErrorCode": 0,
[2026-03-08 09:46:27]     "exeErrorDiag": "",
[2026-03-08 09:46:27]     "pilotErrorCode": 0,
[2026-03-08 09:46:27]     "pilotErrorDiag": "",
[2026-03-08 09:46:27]  *** Listing of results directory ***
[2026-03-08 09:46:27] total 403532
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:56 pilot3.tar.gz
[2026-03-08 09:46:27] -rwx------. 1 boinc boinc     36322 Mar  7 12:56 runpilot2-wrapper.sh
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:56 queuedata.json
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc       100 Mar  8 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 09:46:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 08:00 run_atlas
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc       105 Mar  8 08:00 job.xml
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc      6705 Mar  8 08:00 init_data.xml
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc 209803229 Mar  8 08:00 EVNT.48966985._000550.pool.root.1
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc     15845 Mar  8 08:00 start_atlas.sh
[2026-03-08 09:46:27] drwxrwx--x. 2 boinc boinc      4096 Mar  8 08:00 shared
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc    597959 Mar  8 08:00 input.tar.gz
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc         0 Mar  8 08:00 boinc_lockfile
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc      2592 Mar  8 08:00 pandaJob.out
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc    999169 Mar  8 08:00 agis_schedconf.cvmfs.json
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc   1521291 Mar  8 08:00 agis_ddmendpoints.agis.ALL.json
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc       444 Mar  8 08:01 workernode_map.json
[2026-03-08 09:46:27] drwx------. 5 boinc boinc      4096 Mar  8 08:01 pilot3
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc 197071422 Mar  8 09:44 HITS.48966988._014000.pool.root.1
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc       530 Mar  8 09:45 boinc_task_state.xml
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc      1032 Mar  8 09:45 memory_monitor_summary.json
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc    295081 Mar  8 09:45 log.48966988._014000.job.log.tgz.1
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc      6356 Mar  8 09:45 heartbeat.json
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc        95 Mar  8 09:45 pilot_heartbeat.json
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc        27 Mar  8 09:46 wrapper_checkpoint.txt
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc      8192 Mar  8 09:46 boinc_mmap_file
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc      6441 Mar  8 09:46 pilotlog.txt
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc    901461 Mar  8 09:46 log.48966988._014000.job.log.1
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc       357 Mar  8 09:46 output.list
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc       620 Mar  8 09:46 runtime_log
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc   1218560 Mar  8 09:46 result.tar.gz
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc      9204 Mar  8 09:46 runtime_log.err
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc       663 Mar  8 09:46 h0uNDm1R5I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWSTLDmamevAo.diag
[2026-03-08 09:46:27] -rw-r--r--. 1 boinc boinc     21286 Mar  8 09:46 stderr.txt
[2026-03-08 09:46:27] HITS file was successfully produced:
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc 197071422 Mar  8 09:44 shared/HITS.pool.root.1
[2026-03-08 09:46:27]  *** Contents of shared directory: ***
[2026-03-08 09:46:27] total 399144
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc 209803229 Mar  8 08:00 ATLAS.root_0
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc     15845 Mar  8 08:00 start_atlas.sh
[2026-03-08 09:46:27] -rw-r--r--. 2 boinc boinc    597959 Mar  8 08:00 input.tar.gz
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc 197071422 Mar  8 09:44 HITS.pool.root.1
[2026-03-08 09:46:27] -rw-------. 1 boinc boinc   1218560 Mar  8 09:46 result.tar.gz
09:46:29 (1251145): run_atlas exited; CPU time 24057.541196
09:46:29 (1251145): called boinc_finish(0)

</stderr_txt>
]]>

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