Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:37:01 (3206022): wrapper (7.7.26015): starting
17:37:01 (3206022): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 17:37:01] Arguments: --nthreads 12
[2026-03-07 17:37:01] Threads: 12
[2026-03-07 17:37:01] Checking for CVMFS
[2026-03-07 17:37:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 17:37:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 17:37:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 17:37:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 17:37:02] 2.11.0.0 2614715 105 63132 157009 3 188 3350306 6144001 11394 130560 0 1465432 99.999 6904 360 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-07 17:37:02] CVMFS is ok
[2026-03-07 17:37:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:37:02] Checking for apptainer binary...
[2026-03-07 17:37:02] apptainer is not installed, using version from CVMFS
[2026-03-07 17:37:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:37:02] radiat0r
[2026-03-07 17:37:02] apptainer works
[2026-03-07 17:37:02] Set ATHENA_PROC_NUMBER=12
[2026-03-07 17:37:02] Set ATHENA_CORE_NUMBER=12
[2026-03-07 17:37:02] Starting ATLAS job with PandaID=7039963371
[2026-03-07 17:37:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 18:15:43]  *** The last 200 lines of the pilot log: ***
[2026-03-07 18:15:43]  lfn=log.48700922._002891.job.log.tgz.1
[2026-03-07 18:15:43]  mtime=0
[2026-03-07 18:15:43]  protocol_id=None
[2026-03-07 18:15:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 18:15:43]  replicas=None
[2026-03-07 18:15:43]  scope=mc23_13p6TeV
[2026-03-07 18:15:43]  status=None
[2026-03-07 18:15:43]  status_code=0
[2026-03-07 18:15:43]  storage_token=
[2026-03-07 18:15:43]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-7039963371/log.48700922._002891.job.log.tgz.1
[2026-03-07 18:15:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/a1/log.48700922._002891.job.log.tgz.1
[2026-03-07 18:15:43]  workdir=None
[2026-03-07 18:15:43] ]
[2026-03-07 18:15:43] 2026-03-07 18:15:05,038 | INFO     | transferring file log.48700922._002891.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-7039963371/log.48700922._002891.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-07 18:15:43] 2026-03-07 18:15:05,038 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-7039963371/log.48700922._002891.job.log.tgz.1 /var/lib/boinc/slots/18/log.48700922._002891.j
[2026-03-07 18:15:43] 2026-03-07 18:15:05,064 | INFO     | adding to output.list: log.48700922._002891.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/a1/log.48700922._002891.job.log.tg
[2026-03-07 18:15:43] 2026-03-07 18:15:05,066 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 18:15:43] 2026-03-07 18:15:05,066 | INFO     | summary of transferred files:
[2026-03-07 18:15:43] 2026-03-07 18:15:05,066 | INFO     |  -- lfn=log.48700922._002891.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 18:15:43] 2026-03-07 18:15:05,066 | INFO     | stage-out finished correctly
[2026-03-07 18:15:43] 2026-03-07 18:15:06,161 | INFO     | PID=3217663 has CPU usage=25.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 18:15:43] 2026-03-07 18:15:06,162 | INFO     | .. there are 17 such processes running
[2026-03-07 18:15:43] 2026-03-07 18:15:06,466 | INFO     | monitor loop #160: job 0:7039963371 is in state 'finished'
[2026-03-07 18:15:43] 2026-03-07 18:15:06,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 18:15:43] 2026-03-07 18:15:07,165 | INFO     | time since job start (2267s) is within the limit (349056.0s)
[2026-03-07 18:15:43] 2026-03-07 18:15:07,835 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 18:15:43] 2026-03-07 18:15:08,970 | INFO     | monitor loop #161: job 0:7039963371 is in state 'finished'
[2026-03-07 18:15:43] 2026-03-07 18:15:08,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 18:15:43] 2026-03-07 18:15:09,170 | INFO     | time since job start (2269s) is within the limit (349056.0s)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,379 | INFO     | job 7039963371 has state=finished
[2026-03-07 18:15:43] 2026-03-07 18:15:10,379 | INFO     | preparing for final server update for job 7039963371 in state='finished'
[2026-03-07 18:15:43] 2026-03-07 18:15:10,380 | INFO     | reading metadata from: /var/lib/boinc/slots/18/PanDA_Pilot-7039963371/jobReport.json
[2026-03-07 18:15:43] 2026-03-07 18:15:10,384 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/18/workernode_map.json
[2026-03-07 18:15:43] 2026-03-07 18:15:10,385 | INFO     | this job has now completed (state=finished)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,385 | INFO     | log transfer has been attempted: DONE
[2026-03-07 18:15:43] 2026-03-07 18:15:10,385 | INFO     | job 7039963371 has finished - writing final server update
[2026-03-07 18:15:43] 2026-03-07 18:15:10,386 | INFO     | total number of processed events: 400 (read)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,459 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7039963371/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,460 | INFO     | extracted standard info from prmon json
[2026-03-07 18:15:43] 2026-03-07 18:15:10,460 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 18:15:43] 2026-03-07 18:15:10,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 18:15:43] 2026-03-07 18:15:10,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 18:15:43] 2026-03-07 18:15:10,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 18:15:43] 2026-03-07 18:15:10,463 | INFO     | fitting pss+swap vs Time
[2026-03-07 18:15:43] 2026-03-07 18:15:10,463 | INFO     | sum of square deviations: 8362947.5
[2026-03-07 18:15:43] 2026-03-07 18:15:10,463 | INFO     | sum of deviations: 48050005.0
[2026-03-07 18:15:43] 2026-03-07 18:15:10,463 | INFO     | mean x: 1772906254.5
[2026-03-07 18:15:43] 2026-03-07 18:15:10,463 | INFO     | mean y: 2668800.466666667
[2026-03-07 18:15:43] 2026-03-07 18:15:10,464 | INFO     | intersect: -10183710390.991402
[2026-03-07 18:15:43] 2026-03-07 18:15:10,464 | INFO     | chi2: 0.00014927592358299018
[2026-03-07 18:15:43] 2026-03-07 18:15:10,464 | INFO     | current memory leak: 5.75 B/s (using 30 data points, chi2=0.00)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,464 | INFO     | could have reported an average CPU frequency of 2184 MHz (5 samples)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,464 | INFO     | ..............................
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . Timing measurements:
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . get job = 0 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . initial setup = 7 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . payload setup = 7 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . stage-in = 0 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . payload execution = 2240 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . stage-out = 0 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | . log creation = 0 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,465 | INFO     | ..............................
[2026-03-07 18:15:43] 2026-03-07 18:15:10,566 | INFO     | 
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | job summary report
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | --------------------------------------------------
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | PanDA job id: 7039963371
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | task id: 48700922
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | errors: (none)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | pilot state: finished 
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | transexitcode: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | exeerrorcode: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | exeerrordiag: 
[2026-03-07 18:15:43] 2026-03-07 18:15:10,567 | INFO     | exitcode: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | exitmsg: OK
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | cpuconsumptiontime: 22626 s
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | nevents: 400
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | neventsw: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | pid: 3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | pgrp: 3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | corecount: 12
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | event service: False
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | sizes: {0: 2295317, 1: 2295778, 11: 2295778, 2252: 2320990, 2253: 2329990, 2256: 2330046, 2259: 2330400}
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | --------------------------------------------------
[2026-03-07 18:15:43] 2026-03-07 18:15:10,568 | INFO     | 
[2026-03-07 18:15:43] 2026-03-07 18:15:10,569 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-07 18:15:43] 2026-03-07 18:15:10,603 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | job 7039963371 has completed (purged errors)
[2026-03-07 18:15:43] 2026-03-07 18:15:10,605 | INFO     | overall cleanup function is called
[2026-03-07 18:15:43] 2026-03-07 18:15:11,614 | INFO     | --- collectZombieJob: --- 10, [3238139]
[2026-03-07 18:15:43] 2026-03-07 18:15:11,614 | INFO     | zombie collector waiting for pid 3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:11,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 18:15:43] 2026-03-07 18:15:11,615 | INFO     | collected zombie processes
[2026-03-07 18:15:43] 2026-03-07 18:15:11,615 | INFO     | will attempt to kill all subprocesses of pid=3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:12,424 | INFO     | process IDs to be killed: [3238139] (in reverse order)
[2026-03-07 18:15:43] 2026-03-07 18:15:12,675 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 18:15:43] 2026-03-07 18:15:12,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 18:15:43] 2026-03-07 18:15:12,703 | INFO     | did not find any defunct processes belonging to 3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:12,728 | INFO     | did not find any defunct processes belonging to 3238139
[2026-03-07 18:15:43] 2026-03-07 18:15:12,728 | INFO     | ready for new job
[2026-03-07 18:15:43] 2026-03-07 18:15:12,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 18:15:43] 2026-03-07 18:15:12,732 | INFO     | **************************************
[2026-03-07 18:15:43] 2026-03-07 18:15:12,732 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 18:15:43] 2026-03-07 18:15:12,732 | INFO     | **************************************
[2026-03-07 18:15:43] 2026-03-07 18:15:12,732 | INFO     | 
[2026-03-07 18:15:43] 2026-03-07 18:15:12,768 | INFO     | architecture information:
[2026-03-07 18:15:43] 2026-03-07 18:15:12,769 | INFO     | executing command: cat /etc/os-release
[2026-03-07 18:15:43] 2026-03-07 18:15:12,796 | INFO     | cat /etc/os-release:
[2026-03-07 18:15:43] NAME="CentOS Linux"
[2026-03-07 18:15:43] VERSION="7 (Core)"
[2026-03-07 18:15:43] ID="centos"
[2026-03-07 18:15:43] ID_LIKE="rhel fedora"
[2026-03-07 18:15:43] VERSION_ID="7"
[2026-03-07 18:15:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 18:15:43] ANSI_COLOR="0;31"
[2026-03-07 18:15:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 18:15:43] HOME_URL="https://www.centos.org/"
[2026-03-07 18:15:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 18:15:43] 
[2026-03-07 18:15:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 18:15:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 18:15:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 18:15:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 18:15:43] 
[2026-03-07 18:15:43] 2026-03-07 18:15:12,797 | INFO     | **************************************
[2026-03-07 18:15:43] 2026-03-07 18:15:13,299 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-07 18:15:43] 2026-03-07 18:15:13,332 | INFO     | sufficient remaining disk space (1717885206528 B)
[2026-03-07 18:15:43] 2026-03-07 18:15:13,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 18:15:43] 2026-03-07 18:15:13,332 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 18:15:43] 2026-03-07 18:15:13,333 | INFO     | update_server=False
[2026-03-07 18:15:43] 2026-03-07 18:15:13,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 18:15:43] 2026-03-07 18:15:13,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:15:43] 2026-03-07 18:15:13,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 18:15:43] 2026-03-07 18:15:13,334 | INFO     | aborting loop
[2026-03-07 18:15:43] 2026-03-07 18:15:13,890 | INFO     | all data control threads have been joined
[2026-03-07 18:15:43] 2026-03-07 18:15:13,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 18:15:43] 2026-03-07 18:15:14,338 | INFO     | [job] retrieve thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,340 | INFO     | [job] job monitor thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,364 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,486 | INFO     | [payload] failed_post thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,614 | INFO     | all job control threads have been joined
[2026-03-07 18:15:43] 2026-03-07 18:15:14,713 | INFO     | all payload control threads have been joined
[2026-03-07 18:15:43] 2026-03-07 18:15:14,798 | INFO     | [data] copytool_in thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,894 | INFO     | [data] control thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:14,979 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,340 | INFO     | [data] copytool_out thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,526 | INFO     | [job] validate thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:15:43] 2026-03-07 18:15:15,619 | INFO     | [job] control thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,719 | INFO     | [payload] control thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,744 | INFO     | [payload] validate_post thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:15,744 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:16,578 | INFO     | [job] queue monitor thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:17,954 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:23,465 | INFO     | job.realtimelogging is not enabled
[2026-03-07 18:15:43] 2026-03-07 18:15:23,692 | INFO     | [monitor] cgroup control has ended
[2026-03-07 18:15:43] 2026-03-07 18:15:24,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 18:15:43] 2026-03-07 18:15:24,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398786881344)>', '<ExcThread(monitor, started 140397850392320)>']
[2026-03-07 18:15:43] 2026-03-07 18:15:29,849 | INFO     | all workflow threads have been joined
[2026-03-07 18:15:43] 2026-03-07 18:15:29,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 18:15:43] 2026-03-07 18:15:29,850 | INFO     | traces error code: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:29,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 18:15:43] 2026-03-07 18:15:41,254 | INFO     | 2278s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | INFO     | PID=3217663 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | INFO     | .. there are 17 such processes running
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 18:15:43] 2026-03-07 18:15:43,281 | INFO     | [monitor] control thread has ended
[2026-03-07 18:15:43] 2026-03-07 18:15:43,459 [wrapper] ==== pilot stdout END ====
[2026-03-07 18:15:43] 2026-03-07 18:15:43,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 18:15:43] 2026-03-07 18:15:43,468 [wrapper] pilotpid: 3217663
[2026-03-07 18:15:43] 2026-03-07 18:15:43,473 [wrapper] Pilot exit status: 0
[2026-03-07 18:15:43] 2026-03-07 18:15:43,488 [wrapper] pandaids: 7039963371
[2026-03-07 18:15:43] 2026-03-07 18:15:43,669 [wrapper] cleanup supervisor_pilot 3402157 3217664
[2026-03-07 18:15:43] 2026-03-07 18:15:43,673 [wrapper] Test setup, not cleaning
[2026-03-07 18:15:43] 2026-03-07 18:15:43,677 [wrapper] apfmon messages muted
[2026-03-07 18:15:43] 2026-03-07 18:15:43,681 [wrapper] ==== wrapper stdout END ====
[2026-03-07 18:15:43] 2026-03-07 18:15:43,685 [wrapper] ==== wrapper stderr END ====
[2026-03-07 18:15:43]  *** Error codes and diagnostics ***
[2026-03-07 18:15:43]     "exeErrorCode": 0,
[2026-03-07 18:15:43]     "exeErrorDiag": "",
[2026-03-07 18:15:43]     "pilotErrorCode": 0,
[2026-03-07 18:15:43]     "pilotErrorDiag": "",
[2026-03-07 18:15:43]  *** Listing of results directory ***
[2026-03-07 18:15:43] total 337324
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc      5111 Mar  4 12:56 queuedata.json
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc    584627 Mar  4 12:56 pilot3.tar.gz
[2026-03-07 18:15:43] -rwx------ 1 boinc boinc     36322 Mar  4 12:57 runpilot2-wrapper.sh
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc       100 Mar  7 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 18:15:43] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 17:37 run_atlas
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc       105 Mar  7 17:37 job.xml
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc     15845 Mar  7 17:37 start_atlas.sh
[2026-03-07 18:15:43] drwxrwx--x 2 boinc boinc      4096 Mar  7 17:37 shared
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc    597933 Mar  7 17:37 input.tar.gz
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc      9415 Mar  7 17:37 init_data.xml
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc 190503614 Mar  7 17:37 EVNT.48700920._000110.pool.root.1
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc         0 Mar  7 17:37 boinc_setup_complete
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc         0 Mar  7 17:37 boinc_lockfile
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc      2517 Mar  7 17:37 pandaJob.out
[2026-03-07 18:15:43] -rw------- 1 boinc boinc    999177 Mar  7 17:37 agis_schedconf.cvmfs.json
[2026-03-07 18:15:43] -rw------- 1 boinc boinc   1521291 Mar  7 17:37 agis_ddmendpoints.agis.ALL.json
[2026-03-07 18:15:43] -rw------- 1 boinc boinc       421 Mar  7 17:37 workernode_map.json
[2026-03-07 18:15:43] drwx------ 5 boinc boinc      4096 Mar  7 17:37 pilot3
[2026-03-07 18:15:43] -rw------- 1 boinc boinc 149558082 Mar  7 18:14 HITS.48700922._002891.pool.root.1
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc       529 Mar  7 18:14 boinc_task_state.xml
[2026-03-07 18:15:43] -rw------- 1 boinc boinc        95 Mar  7 18:14 pilot_heartbeat.json
[2026-03-07 18:15:43] -rw------- 1 boinc boinc      1028 Mar  7 18:14 memory_monitor_summary.json
[2026-03-07 18:15:43] -rw------- 1 boinc boinc    355509 Mar  7 18:15 log.48700922._002891.job.log.tgz.1
[2026-03-07 18:15:43] -rw------- 1 boinc boinc      6283 Mar  7 18:15 heartbeat.json
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc      8192 Mar  7 18:15 boinc_mmap_file
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc        27 Mar  7 18:15 wrapper_checkpoint.txt
[2026-03-07 18:15:43] -rw------- 1 boinc boinc       938 Mar  7 18:15 pilotlog.txt
[2026-03-07 18:15:43] -rw------- 1 boinc boinc    352563 Mar  7 18:15 log.48700922._002891.job.log.1
[2026-03-07 18:15:43] -rw------- 1 boinc boinc       357 Mar  7 18:15 output.list
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc       620 Mar  7 18:15 runtime_log
[2026-03-07 18:15:43] -rw------- 1 boinc boinc    727040 Mar  7 18:15 result.tar.gz
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc      8787 Mar  7 18:15 runtime_log.err
[2026-03-07 18:15:43] -rw------- 1 boinc boinc       641 Mar  7 18:15 hwlNDmsx0H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5NKLDmbOw4En.diag
[2026-03-07 18:15:43] -rw-r--r-- 1 boinc boinc     21448 Mar  7 18:15 stderr.txt
[2026-03-07 18:15:43] HITS file was successfully produced:
[2026-03-07 18:15:43] -rw------- 1 boinc boinc 149558082 Mar  7 18:14 shared/HITS.pool.root.1
[2026-03-07 18:15:43]  *** Contents of shared directory: ***
[2026-03-07 18:15:43] total 333416
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc     15845 Mar  7 17:37 start_atlas.sh
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc    597933 Mar  7 17:37 input.tar.gz
[2026-03-07 18:15:43] -rw-r--r-- 2 boinc boinc 190503614 Mar  7 17:37 ATLAS.root_0
[2026-03-07 18:15:43] -rw------- 1 boinc boinc 149558082 Mar  7 18:14 HITS.pool.root.1
[2026-03-07 18:15:43] -rw------- 1 boinc boinc    727040 Mar  7 18:15 result.tar.gz
18:15:45 (3206022): run_atlas exited; CPU time 22745.538781
18:15:45 (3206022): called boinc_finish(0)

</stderr_txt>
]]>

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