Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:08 (2404465): wrapper (7.7.26015): starting
18:20:08 (2404465): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 18:20:08] Arguments: --nthreads 4
[2026-03-07 18:20:08] Threads: 4
[2026-03-07 18:20:08] Checking for CVMFS
[2026-03-07 18:20:08] No cvmfs_config command found, will try listing directly
[2026-03-07 18:20:08] CVMFS is ok
[2026-03-07 18:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 18:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 18:20:08] Further information can be found at the LHC@home message board.
[2026-03-07 18:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 18:20:08] Checking for apptainer binary...
[2026-03-07 18:20:08] which: no apptainer in ((null))
[2026-03-07 18:20:08] apptainer is not installed, using version from CVMFS
[2026-03-07 18:20:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 18:20:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 18:20:08] apptainer works
[2026-03-07 18:20:08] Set ATHENA_PROC_NUMBER=4
[2026-03-07 18:20:08] Set ATHENA_CORE_NUMBER=4
[2026-03-07 18:20:08] Starting ATLAS job with PandaID=7044937936
[2026-03-07 18:20:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 19:40:34]  *** The last 200 lines of the pilot log: ***
[2026-03-07 19:40:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/87/log.48958610._000432.job.log.tgz.1
[2026-03-07 19:40:34]  workdir=None
[2026-03-07 19:40:34] ]
[2026-03-07 19:40:34] 2026-03-07 18:39:46,896 | INFO     | transferring file log.48958610._000432.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/log.48958610._000432.job.log.tgz.1 to /var/lib/b
[2026-03-07 19:40:34] 2026-03-07 18:39:46,896 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/log.48958610._000432.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/4/lo
[2026-03-07 19:40:34] 2026-03-07 18:39:46,912 | INFO     | adding to output.list: log.48958610._000432.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/87/log.48958610._000432.job.log.tg
[2026-03-07 19:40:34] 2026-03-07 18:39:46,913 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 19:40:34] 2026-03-07 18:39:46,913 | INFO     | summary of transferred files:
[2026-03-07 19:40:34] 2026-03-07 18:39:46,913 | INFO     |  -- lfn=log.48958610._000432.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 19:40:34] 2026-03-07 18:39:46,913 | INFO     | stage-out finished correctly
[2026-03-07 19:40:34] 2026-03-07 18:39:47,842 | INFO     | time since job start (4767s) is within the limit (349056.0s)
[2026-03-07 19:40:34] 2026-03-07 18:39:48,421 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 19:40:34] 2026-03-07 18:39:49,674 | WARNING  | process 2415669 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 19:40:34] 2026-03-07 18:39:49,674 | INFO     | using path: /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | INFO     | using path: /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2155211 B
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16086 B
[2026-03-07 19:40:34] 2026-03-07 18:39:49,675 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/4
[2026-03-07 19:40:34] 2026-03-07 18:39:49,689 | INFO     | sufficient remaining disk space (20186136576 B)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,689 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,689 | INFO     | size of work directory /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936: 2455390 B (within 5033164800 B limit)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,690 | INFO     | pfn file=/var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/HITS.48958610._000432.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,690 | INFO     | total size of present files: 0 B (workdir size: 2455390 B)
[2026-03-07 19:40:34] 2026-03-07 18:39:49,690 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/HITS.48958610._000432.pool.root.1 since it does not exist
[2026-03-07 19:40:34] 2026-03-07 18:39:49,848 | INFO     | time since job start (4769s) is within the limit (349056.0s)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,092 | INFO     | number of running child processes to parent process 2415669: 1
[2026-03-07 19:40:34] 2026-03-07 18:39:50,093 | INFO     | maximum number of monitored processes: 6
[2026-03-07 19:40:34] 2026-03-07 18:39:50,564 | INFO     | job 7044937936 has state=finished
[2026-03-07 19:40:34] 2026-03-07 18:39:50,564 | INFO     | preparing for final server update for job 7044937936 in state='finished'
[2026-03-07 19:40:34] 2026-03-07 18:39:50,564 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/jobReport.json
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/4/workernode_map.json
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | this job has now completed (state=finished)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | log transfer has been attempted: DONE
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | job 7044937936 has finished - writing final server update
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_273599/.job.ad'
[2026-03-07 19:40:34] 2026-03-07 18:39:50,566 | INFO     | total number of processed events: 400 (read)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,584 | INFO     | using path: /var/lib/boinc/var/slot44/slots/4/PanDA_Pilot-7044937936/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,584 | INFO     | extracted standard info from prmon json
[2026-03-07 19:40:34] 2026-03-07 18:39:50,584 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 19:40:34] 2026-03-07 18:39:50,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 19:40:34] 2026-03-07 18:39:50,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 19:40:34] 2026-03-07 18:39:50,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | fitting pss+swap vs Time
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | sum of square deviations: 110960220.0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | sum of deviations: -692024504.0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | mean x: 1772906481.0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | mean y: 2345478.2253521127
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | intersect: 11059413751.453455
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | chi2: 0.0001502758316198906
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | current memory leak: -6.24 B/s (using 71 data points, chi2=0.00)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,586 | INFO     | could have reported an average CPU frequency of 3607 MHz (6 samples)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | ..............................
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . Timing measurements:
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . get job = 0 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . initial setup = 5 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . payload setup = 4 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . stage-in = 0 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . payload execution = 4746 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . stage-out = 0 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | . log creation = 0 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,587 | INFO     | ..............................
[2026-03-07 19:40:34] 2026-03-07 18:39:50,861 | INFO     | 
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | job summary report
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | --------------------------------------------------
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | PanDA job id: 7044937936
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | task id: 48958610
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | errors: (none)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | pilot state: finished 
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | transexitcode: 0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | exeerrorcode: 0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | exeerrordiag: 
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | exitcode: 0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | exitmsg: OK
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | cpuconsumptiontime: 18244 s
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | nevents: 400
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | neventsw: 0
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | pid: 2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | pgrp: 2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | corecount: 4
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | event service: False
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | sizes: {0: 2295769, 11: 2295769, 4754: 2322033, 4755: 2331053, 4756: 2331109, 4758: 2331331}
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | --------------------------------------------------
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | 
[2026-03-07 19:40:34] 2026-03-07 18:39:50,862 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/4
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | job 7044937936 has completed (purged errors)
[2026-03-07 19:40:34] 2026-03-07 18:39:50,882 | INFO     | overall cleanup function is called
[2026-03-07 19:40:34] 2026-03-07 18:39:51,889 | INFO     | --- collectZombieJob: --- 10, [2415669]
[2026-03-07 19:40:34] 2026-03-07 18:39:51,889 | INFO     | zombie collector waiting for pid 2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:51,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 19:40:34] 2026-03-07 18:39:51,889 | INFO     | collected zombie processes
[2026-03-07 19:40:34] 2026-03-07 18:39:51,889 | INFO     | will attempt to kill all subprocesses of pid=2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:52,316 | INFO     | process IDs to be killed: [2415669] (in reverse order)
[2026-03-07 19:40:34] 2026-03-07 18:39:52,534 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 19:40:34] 2026-03-07 18:39:52,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 19:40:34] 2026-03-07 18:39:52,560 | INFO     | did not find any defunct processes belonging to 2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:52,584 | INFO     | did not find any defunct processes belonging to 2415669
[2026-03-07 19:40:34] 2026-03-07 18:39:52,584 | INFO     | ready for new job
[2026-03-07 19:40:34] 2026-03-07 18:39:52,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 19:40:34] 2026-03-07 18:39:52,585 | INFO     | **************************************
[2026-03-07 19:40:34] 2026-03-07 18:39:52,586 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 19:40:34] 2026-03-07 18:39:52,586 | INFO     | **************************************
[2026-03-07 19:40:34] 2026-03-07 18:39:52,586 | INFO     | 
[2026-03-07 19:40:34] 2026-03-07 18:39:52,592 | INFO     | architecture information:
[2026-03-07 19:40:34] 2026-03-07 18:39:52,592 | INFO     | executing command: cat /etc/os-release
[2026-03-07 19:40:34] 2026-03-07 18:39:52,606 | INFO     | cat /etc/os-release:
[2026-03-07 19:40:34] NAME="CentOS Linux"
[2026-03-07 19:40:34] VERSION="7 (Core)"
[2026-03-07 19:40:34] ID="centos"
[2026-03-07 19:40:34] ID_LIKE="rhel fedora"
[2026-03-07 19:40:34] VERSION_ID="7"
[2026-03-07 19:40:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 19:40:34] ANSI_COLOR="0;31"
[2026-03-07 19:40:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 19:40:34] HOME_URL="https://www.centos.org/"
[2026-03-07 19:40:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 19:40:34] 
[2026-03-07 19:40:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 19:40:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 19:40:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 19:40:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 19:40:34] 
[2026-03-07 19:40:34] 2026-03-07 18:39:52,606 | INFO     | **************************************
[2026-03-07 19:40:34] 2026-03-07 18:39:53,109 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/4
[2026-03-07 19:40:34] 2026-03-07 18:39:53,128 | INFO     | sufficient remaining disk space (20178796544 B)
[2026-03-07 19:40:34] 2026-03-07 18:39:53,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 19:40:34] 2026-03-07 18:39:53,128 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 19:40:34] 2026-03-07 18:39:53,128 | INFO     | update_server=False
[2026-03-07 19:40:34] 2026-03-07 18:39:53,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 19:40:34] 2026-03-07 18:39:53,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 19:40:34] 2026-03-07 18:39:53,244 | INFO     | all data control threads have been joined
[2026-03-07 19:40:34] 2026-03-07 18:39:53,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:40:34] 2026-03-07 18:39:53,601 | INFO     | aborting loop
[2026-03-07 19:40:34] 2026-03-07 18:39:53,928 | INFO     | all payload control threads have been joined
[2026-03-07 19:40:34] 2026-03-07 18:39:54,134 | INFO     | [job] retrieve thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:54,250 | INFO     | [data] control thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:54,434 | INFO     | all job control threads have been joined
[2026-03-07 19:40:34] 2026-03-07 18:39:54,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 19:40:34] 2026-03-07 18:39:54,606 | INFO     | [job] job monitor thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:54,855 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:54,933 | INFO     | [payload] control thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:54,992 | INFO     | [job] validate thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,133 | INFO     | [data] copytool_out thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,178 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,321 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,403 | INFO     | [payload] validate_post thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,411 | INFO     | [data] copytool_in thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,439 | INFO     | [job] control thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,475 | INFO     | [payload] failed_post thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:55,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:40:34] 2026-03-07 18:39:56,641 | INFO     | [job] queue monitor thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:39:58,479 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:40:03,754 | INFO     | job.realtimelogging is not enabled
[2026-03-07 19:40:34] 2026-03-07 18:40:04,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 19:40:34] 2026-03-07 18:40:23,428 | INFO     | PID=2409143 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 19:40:34] 2026-03-07 18:40:23,428 | INFO     | .. there are 53 such processes running
[2026-03-07 19:40:34] 2026-03-07 18:40:23,429 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 19:40:34] 2026-03-07 18:40:23,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 19:40:34] 2026-03-07 18:40:23,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 19:40:34] 2026-03-07 18:40:27,992 | INFO     | [monitor] cgroup control has ended
[2026-03-07 19:40:34] 2026-03-07 18:40:29,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22710750418752)>', '<ExcThread(monitor, started 22710444881664)>']
[2026-03-07 19:40:34] 2026-03-07 18:40:29,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 19:40:34] 2026-03-07 18:40:29,451 | INFO     | [monitor] control thread has ended
[2026-03-07 19:40:34] 2026-03-07 18:40:34,192 | INFO     | all workflow threads have been joined
[2026-03-07 19:40:34] 2026-03-07 18:40:34,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 19:40:34] 2026-03-07 18:40:34,192 | INFO     | traces error code: 0
[2026-03-07 19:40:34] 2026-03-07 18:40:34,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 19:40:34] 2026-03-07 18:40:34,361 [wrapper] ==== pilot stdout END ====
[2026-03-07 19:40:34] 2026-03-07 18:40:34,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 19:40:34] 2026-03-07 18:40:34,365 [wrapper] pilotpid: 2409143
[2026-03-07 19:40:34] 2026-03-07 18:40:34,368 [wrapper] Pilot exit status: 0
[2026-03-07 19:40:34] 2026-03-07 18:40:34,376 [wrapper] pandaids: 7044937936
[2026-03-07 19:40:34] 2026-03-07 18:40:34,489 [wrapper] cleanup supervisor_pilot 3113292 2409144
[2026-03-07 19:40:34] 2026-03-07 18:40:34,492 [wrapper] Test setup, not cleaning
[2026-03-07 19:40:34] 2026-03-07 18:40:34,494 [wrapper] apfmon messages muted
[2026-03-07 19:40:34] 2026-03-07 18:40:34,496 [wrapper] ==== wrapper stdout END ====
[2026-03-07 19:40:34] 2026-03-07 18:40:34,498 [wrapper] ==== wrapper stderr END ====
[2026-03-07 19:40:34]  *** Error codes and diagnostics ***
[2026-03-07 19:40:34]     "exeErrorCode": 0,
[2026-03-07 19:40:34]     "exeErrorDiag": "",
[2026-03-07 19:40:34]     "pilotErrorCode": 0,
[2026-03-07 19:40:34]     "pilotErrorDiag": "",
[2026-03-07 19:40:34]  *** Listing of results directory ***
[2026-03-07 19:40:34] total 436936
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:17 queuedata.json
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:17 pilot3.tar.gz
[2026-03-07 19:40:34] -rwx------. 1 boinc boinc     36322 Mar  7 12:17 runpilot2-wrapper.sh
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc       100 Mar  7 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 19:40:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 18:20 run_atlas
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc       105 Mar  7 18:20 job.xml
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc    597933 Mar  7 18:20 input.tar.gz
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc      6702 Mar  7 18:20 init_data.xml
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc 259255418 Mar  7 18:20 EVNT.48958608._000018.pool.root.1
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc     15845 Mar  7 18:20 start_atlas.sh
[2026-03-07 19:40:34] drwxrwx--x. 2 boinc boinc      4096 Mar  7 18:20 shared
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc         0 Mar  7 18:20 boinc_lockfile
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc      2525 Mar  7 18:20 pandaJob.out
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc    999177 Mar  7 18:20 agis_schedconf.cvmfs.json
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc   1521291 Mar  7 18:20 agis_ddmendpoints.agis.ALL.json
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc       443 Mar  7 18:20 workernode_map.json
[2026-03-07 19:40:34] drwx------. 5 boinc boinc      4096 Mar  7 18:20 pilot3
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc 182303438 Mar  7 19:39 HITS.48958610._000432.pool.root.1
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc       529 Mar  7 19:39 boinc_task_state.xml
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc      1043 Mar  7 19:39 memory_monitor_summary.json
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc    260721 Mar  7 19:39 log.48958610._000432.job.log.tgz.1
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc      6346 Mar  7 19:39 heartbeat.json
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc      8192 Mar  7 19:40 boinc_mmap_file
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc        27 Mar  7 19:40 wrapper_checkpoint.txt
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc        95 Mar  7 19:40 pilot_heartbeat.json
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc      4901 Mar  7 19:40 pilotlog.txt
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc    702647 Mar  7 19:40 log.48958610._000432.job.log.1
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc       357 Mar  7 19:40 output.list
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc       620 Mar  7 19:40 runtime_log
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc    983040 Mar  7 19:40 result.tar.gz
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc      9204 Mar  7 19:40 runtime_log.err
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc       662 Mar  7 19:40 phxKDm3p4I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYMTLDmgcflNn.diag
[2026-03-07 19:40:34] -rw-r--r--. 1 boinc boinc     22499 Mar  7 19:40 stderr.txt
[2026-03-07 19:40:34] HITS file was successfully produced:
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc 182303438 Mar  7 19:39 shared/HITS.pool.root.1
[2026-03-07 19:40:34]  *** Contents of shared directory: ***
[2026-03-07 19:40:34] total 432780
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc    597933 Mar  7 18:20 input.tar.gz
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc 259255418 Mar  7 18:20 ATLAS.root_0
[2026-03-07 19:40:34] -rw-r--r--. 2 boinc boinc     15845 Mar  7 18:20 start_atlas.sh
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc 182303438 Mar  7 19:39 HITS.pool.root.1
[2026-03-07 19:40:34] -rw-------. 1 boinc boinc    983040 Mar  7 19:40 result.tar.gz
19:40:35 (2404465): run_atlas exited; CPU time 18432.223198
19:40:35 (2404465): called boinc_finish(0)

</stderr_txt>
]]>

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