Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:18 (1909283): wrapper (7.7.26015): starting
10:42:18 (1909283): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 10:42:18] Arguments: --nthreads 4
[2026-03-07 10:42:18] Threads: 4
[2026-03-07 10:42:18] Checking for CVMFS
[2026-03-07 10:42:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 10:42:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 10:42:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 10:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 10:42:18] 2.13.3.0 21737 6904 51480 157005 0 188 8635157 102400001 2739 130560 15 4848935 99.989 238997 63 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 10:42:18] CVMFS is ok
[2026-03-07 10:42:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 10:42:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 10:42:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 10:42:18] Further information can be found at the LHC@home message board.
[2026-03-07 10:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 10:42:18] Checking for apptainer binary...
[2026-03-07 10:42:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 10:42:18] Running /usr/bin/apptainer --version
[2026-03-07 10:42:18] apptainer version 1.4.5
[2026-03-07 10:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 10:42:18] T7810-Ubuntu
[2026-03-07 10:42:18] apptainer works
[2026-03-07 10:42:18] Set ATHENA_PROC_NUMBER=4
[2026-03-07 10:42:18] Set ATHENA_CORE_NUMBER=4
[2026-03-07 10:42:18] Starting ATLAS job with PandaID=7043068699
[2026-03-07 10:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 14:39:02]  *** The last 200 lines of the pilot log: ***
[2026-03-07 14:39:02] 2026-03-07 19:38:02,496 | INFO     | total number of processed events: 400 (read)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,510 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7043068699/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,511 | INFO     | extracted standard info from prmon json
[2026-03-07 14:39:02] 2026-03-07 19:38:02,511 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 14:39:02] 2026-03-07 19:38:02,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 14:39:02] 2026-03-07 19:38:02,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 14:39:02] 2026-03-07 19:38:02,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 14:39:02] 2026-03-07 19:38:02,516 | INFO     | fitting pss+swap vs Time
[2026-03-07 14:39:02] 2026-03-07 19:38:02,517 | INFO     | sum of square deviations: 3871990738.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,518 | INFO     | sum of deviations: -21729839008.99999
[2026-03-07 14:39:02] 2026-03-07 19:38:02,518 | INFO     | mean x: 1772905222.5
[2026-03-07 14:39:02] 2026-03-07 19:38:02,518 | INFO     | mean y: 2328348.896551724
[2026-03-07 14:39:02] 2026-03-07 19:38:02,519 | INFO     | intersect: 9951976390.420433
[2026-03-07 14:39:02] 2026-03-07 19:38:02,519 | INFO     | chi2: 2.2044325614609064
[2026-03-07 14:39:02] 2026-03-07 19:38:02,519 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,523 | INFO     | sum of deviations: -7922383357.000001
[2026-03-07 14:39:02] 2026-03-07 19:38:02,523 | INFO     | mean x: 1772905070.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,523 | INFO     | mean y: 2336799.594713656
[2026-03-07 14:39:02] 2026-03-07 19:38:02,523 | INFO     | intersect: 3874857682.0325065
[2026-03-07 14:39:02] 2026-03-07 19:38:02,524 | INFO     | chi2: 1.5415239386296953
[2026-03-07 14:39:02] 2026-03-07 19:38:02,524 | INFO     | current chi2=1.5415239386296953 (change=30.071621805109466 %)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,524 | INFO     | sum of square deviations: 3392567795.5
[2026-03-07 14:39:02] 2026-03-07 19:38:02,526 | INFO     | sum of deviations: -7599811117.500004
[2026-03-07 14:39:02] 2026-03-07 19:38:02,526 | INFO     | mean x: 1772904917.5
[2026-03-07 14:39:02] 2026-03-07 19:38:02,526 | INFO     | mean y: 2337009.463963964
[2026-03-07 14:39:02] 2026-03-07 19:38:02,526 | INFO     | intersect: 3973884024.7244663
[2026-03-07 14:39:02] 2026-03-07 19:38:02,526 | INFO     | chi2: 1.541177573678714
[2026-03-07 14:39:02] 2026-03-07 19:38:02,527 | INFO     | current chi2=1.541177573678714 (change=0.02246899592678816 %)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,527 | INFO     | right removable region: 221
[2026-03-07 14:39:02] 2026-03-07 19:38:02,527 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | sum of deviations: -51872749645.00001
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | mean x: 1772905375.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | mean y: 2346896.7488986785
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | intersect: 25358143471.543987
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | chi2: 0.8061266104699782
[2026-03-07 14:39:02] 2026-03-07 19:38:02,529 | INFO     | current chi2=0.8061266104699782 (change=63.431559460555796 %)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,530 | INFO     | sum of square deviations: 3392567795.5
[2026-03-07 14:39:02] 2026-03-07 19:38:02,531 | INFO     | sum of deviations: -47546333093.50001
[2026-03-07 14:39:02] 2026-03-07 19:38:02,531 | INFO     | mean x: 1772905527.5
[2026-03-07 14:39:02] 2026-03-07 19:38:02,532 | INFO     | mean y: 2344078.436936937
[2026-03-07 14:39:02] 2026-03-07 19:38:02,532 | INFO     | intersect: 24849351370.56353
[2026-03-07 14:39:02] 2026-03-07 19:38:02,532 | INFO     | chi2: 0.8045217519534643
[2026-03-07 14:39:02] 2026-03-07 19:38:02,532 | INFO     | current chi2=0.8045217519534643 (change=0.1990826869712543 %)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,532 | INFO     | left removable region: 20
[2026-03-07 14:39:02] 2026-03-07 19:38:02,533 | INFO     | sum of square deviations: 2518000700.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,534 | INFO     | sum of deviations: -23022961234.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,534 | INFO     | mean x: 1772905497.0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,534 | INFO     | mean y: 2346472.4925373136
[2026-03-07 14:39:02] 2026-03-07 19:38:02,534 | INFO     | intersect: 16212641620.137453
[2026-03-07 14:39:02] 2026-03-07 19:38:02,535 | INFO     | chi2: 0.10787639125818957
[2026-03-07 14:39:02] 2026-03-07 19:38:02,535 | INFO     | current memory leak: -9.14 B/s (using 201 data points, chi2=0.11)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,535 | INFO     | could have reported an average CPU frequency of 2776 MHz (11 samples)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | ..............................
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . Timing measurements:
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . get job = 0 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . initial setup = 7 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . payload setup = 5 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . stage-in = 0 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . payload execution = 14098 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . stage-out = 2 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,536 | INFO     | . log creation = 0 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,537 | INFO     | ..............................
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | 
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | job summary report
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | --------------------------------------------------
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | PanDA job id: 7043068699
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | task id: 48966988
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | errors: (none)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 14:39:02] 2026-03-07 19:38:02,633 | INFO     | pilot state: finished 
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | transexitcode: 0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | exeerrorcode: 0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | exeerrordiag: 
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | exitcode: 0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | exitmsg: OK
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | cpuconsumptiontime: 55086 s
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | nevents: 400
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | neventsw: 0
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | pid: 1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | pgrp: 1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | corecount: 4
[2026-03-07 14:39:02] 2026-03-07 19:38:02,634 | INFO     | event service: False
[2026-03-07 14:39:02] 2026-03-07 19:38:02,635 | INFO     | sizes: {0: 2295424, 1: 2295885, 12: 2295885, 14107: 2326346, 14110: 2335374, 14113: 2335430, 14116: 2335752}
[2026-03-07 14:39:02] 2026-03-07 19:38:02,635 | INFO     | --------------------------------------------------
[2026-03-07 14:39:02] 2026-03-07 19:38:02,635 | INFO     | 
[2026-03-07 14:39:02] 2026-03-07 19:38:02,635 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-07 14:39:02] 2026-03-07 19:38:02,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,662 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 14:39:02] 2026-03-07 19:38:02,662 | INFO     | job 7043068699 has completed (purged errors)
[2026-03-07 14:39:02] 2026-03-07 19:38:02,662 | INFO     | overall cleanup function is called
[2026-03-07 14:39:02] 2026-03-07 19:38:03,670 | INFO     | --- collectZombieJob: --- 10, [1918088]
[2026-03-07 14:39:02] 2026-03-07 19:38:03,670 | INFO     | zombie collector waiting for pid 1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:03,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 14:39:02] 2026-03-07 19:38:03,670 | INFO     | collected zombie processes
[2026-03-07 14:39:02] 2026-03-07 19:38:03,670 | INFO     | will attempt to kill all subprocesses of pid=1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:04,026 | INFO     | process IDs to be killed: [1918088] (in reverse order)
[2026-03-07 14:39:02] 2026-03-07 19:38:04,117 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 14:39:02] 2026-03-07 19:38:04,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 14:39:02] 2026-03-07 19:38:04,127 | INFO     | did not find any defunct processes belonging to 1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:04,135 | INFO     | did not find any defunct processes belonging to 1918088
[2026-03-07 14:39:02] 2026-03-07 19:38:04,135 | INFO     | ready for new job
[2026-03-07 14:39:02] 2026-03-07 19:38:04,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 14:39:02] 2026-03-07 19:38:04,138 | INFO     | **************************************
[2026-03-07 14:39:02] 2026-03-07 19:38:04,138 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 14:39:02] 2026-03-07 19:38:04,138 | INFO     | **************************************
[2026-03-07 14:39:02] 2026-03-07 19:38:04,138 | INFO     | 
[2026-03-07 14:39:02] 2026-03-07 19:38:04,143 | INFO     | architecture information:
[2026-03-07 14:39:02] 2026-03-07 19:38:04,143 | INFO     | executing command: cat /etc/os-release
[2026-03-07 14:39:02] 2026-03-07 19:38:04,161 | INFO     | cat /etc/os-release:
[2026-03-07 14:39:02] NAME="CentOS Linux"
[2026-03-07 14:39:02] VERSION="7 (Core)"
[2026-03-07 14:39:02] ID="centos"
[2026-03-07 14:39:02] ID_LIKE="rhel fedora"
[2026-03-07 14:39:02] VERSION_ID="7"
[2026-03-07 14:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 14:39:02] ANSI_COLOR="0;31"
[2026-03-07 14:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 14:39:02] HOME_URL="https://www.centos.org/"
[2026-03-07 14:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 14:39:02] 
[2026-03-07 14:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 14:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 14:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 14:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 14:39:02] 
[2026-03-07 14:39:02] 2026-03-07 19:38:04,161 | INFO     | **************************************
[2026-03-07 14:39:02] 2026-03-07 19:38:04,664 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-07 14:39:02] 2026-03-07 19:38:04,683 | INFO     | sufficient remaining disk space (400362045440 B)
[2026-03-07 14:39:02] 2026-03-07 19:38:04,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 14:39:02] 2026-03-07 19:38:04,684 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 14:39:02] 2026-03-07 19:38:04,684 | INFO     | update_server=False
[2026-03-07 14:39:02] 2026-03-07 19:38:04,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 14:39:02] 2026-03-07 19:38:04,771 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 14:39:02] 2026-03-07 19:38:04,771 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 14:39:02] 2026-03-07 19:38:04,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:39:02] 2026-03-07 19:38:04,772 | INFO     | will abort loop
[2026-03-07 14:39:02] 2026-03-07 19:38:04,789 | INFO     | all data control threads have been joined
[2026-03-07 14:39:02] 2026-03-07 19:38:05,024 | INFO     | all job control threads have been joined
[2026-03-07 14:39:02] 2026-03-07 19:38:05,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 14:39:02] 2026-03-07 19:38:05,678 | INFO     | all payload control threads have been joined
[2026-03-07 14:39:02] 2026-03-07 19:38:05,689 | INFO     | [job] retrieve thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:05,777 | INFO     | [job] job monitor thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:05,790 | INFO     | [data] control thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:05,906 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,029 | INFO     | [job] control thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,279 | INFO     | [job] validate thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 14:39:02] 2026-03-07 19:38:06,560 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,661 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,683 | INFO     | [payload] control thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,728 | INFO     | [payload] validate_post thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:06,936 | INFO     | [data] copytool_in thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:07,175 | INFO     | [payload] failed_post thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:07,189 | INFO     | [data] copytool_out thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:07,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:39:02] 2026-03-07 19:38:08,649 | INFO     | [job] queue monitor thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:10,433 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:15,659 | INFO     | job.realtimelogging is not enabled
[2026-03-07 14:39:02] 2026-03-07 19:38:16,664 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 14:39:02] 2026-03-07 19:38:35,150 | INFO     | PID=1913319 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 14:39:02] 2026-03-07 19:38:35,151 | INFO     | .. there are 4 such processes running
[2026-03-07 14:39:02] 2026-03-07 19:38:35,152 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 14:39:02] 2026-03-07 19:38:35,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 14:39:02] 2026-03-07 19:38:35,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 14:39:02] 2026-03-07 19:38:56,914 | INFO     | [monitor] cgroup control has ended
[2026-03-07 14:39:02] 2026-03-07 19:38:56,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135294708467520)>', '<ExcThread(monitor, started 135294061889280)>']
[2026-03-07 14:39:02] 2026-03-07 19:38:57,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 14:39:02] 2026-03-07 19:38:57,264 | INFO     | [monitor] control thread has ended
[2026-03-07 14:39:02] 2026-03-07 19:39:01,996 | INFO     | all workflow threads have been joined
[2026-03-07 14:39:02] 2026-03-07 19:39:01,996 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 14:39:02] 2026-03-07 19:39:01,996 | INFO     | traces error code: 0
[2026-03-07 14:39:02] 2026-03-07 19:39:01,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 14:39:02] 2026-03-07 19:39:02,096 [wrapper] ==== pilot stdout END ====
[2026-03-07 14:39:02] 2026-03-07 19:39:02,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 14:39:02] 2026-03-07 19:39:02,103 [wrapper] pilotpid: 1913319
[2026-03-07 14:39:02] 2026-03-07 19:39:02,106 [wrapper] Pilot exit status: 0
[2026-03-07 14:39:02] 2026-03-07 19:39:02,116 [wrapper] pandaids: 7043068699
[2026-03-07 14:39:02] 2026-03-07 19:39:02,183 [wrapper] cleanup supervisor_pilot 1958951 1913320
[2026-03-07 14:39:02] 2026-03-07 19:39:02,188 [wrapper] Test setup, not cleaning
[2026-03-07 14:39:02] 2026-03-07 19:39:02,191 [wrapper] apfmon messages muted
[2026-03-07 14:39:02] 2026-03-07 19:39:02,193 [wrapper] ==== wrapper stdout END ====
[2026-03-07 14:39:02] 2026-03-07 19:39:02,195 [wrapper] ==== wrapper stderr END ====
[2026-03-07 14:39:02]  *** Error codes and diagnostics ***
[2026-03-07 14:39:02]     "exeErrorCode": 0,
[2026-03-07 14:39:02]     "exeErrorDiag": "",
[2026-03-07 14:39:02]     "pilotErrorCode": 0,
[2026-03-07 14:39:02]     "pilotErrorDiag": "",
[2026-03-07 14:39:02]  *** Listing of results directory ***
[2026-03-07 14:39:02] total 408156
[2026-03-07 14:39:02] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  6 06:27 pilot3.tar.gz
[2026-03-07 14:39:02] -rwx------ 1 whitlerd whitlerd     36322 Mar  6 06:29 runpilot2-wrapper.sh
[2026-03-07 14:39:02] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  6 06:29 queuedata.json
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 14:39:02] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 10:42 run_atlas
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 10:42 job.xml
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd 211845477 Mar  7 10:42 EVNT.48966985._000294.pool.root.1
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 10:42 start_atlas.sh
[2026-03-07 14:39:02] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 10:42 shared
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd    597971 Mar  7 10:42 input.tar.gz
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd      9127 Mar  7 10:42 init_data.xml
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 10:42 boinc_setup_complete
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 10:42 boinc_lockfile
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd      2590 Mar  7 10:42 pandaJob.out
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd    999177 Mar  7 10:42 agis_schedconf.cvmfs.json
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd       434 Mar  7 10:42 workernode_map.json
[2026-03-07 14:39:02] drwx------ 5 whitlerd whitlerd      4096 Mar  7 10:42 pilot3
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd 197324466 Mar  7 14:37 HITS.48966988._006501.pool.root.1
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 14:37 boinc_task_state.xml
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd      1030 Mar  7 14:37 memory_monitor_summary.json
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 14:37 agis_ddmendpoints.agis.ALL.json
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd    414039 Mar  7 14:37 log.48966988._006501.job.log.tgz.1
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd      6339 Mar  7 14:38 heartbeat.json
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd        95 Mar  7 14:38 pilot_heartbeat.json
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 14:38 boinc_mmap_file
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  7 14:38 wrapper_checkpoint.txt
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd      5093 Mar  7 14:39 pilotlog.txt
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd   2005850 Mar  7 14:39 log.48966988._006501.job.log.1
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd       357 Mar  7 14:39 output.list
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 14:39 runtime_log
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd   2437120 Mar  7 14:39 result.tar.gz
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd       650 Mar  7 14:39 sYSNDmnXiI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIlRLDmM6f8Do.diag
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  7 14:39 runtime_log.err
[2026-03-07 14:39:02] -rw-rw-r-- 1 whitlerd whitlerd     21158 Mar  7 14:39 stderr.txt
[2026-03-07 14:39:02] HITS file was successfully produced:
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd 197324466 Mar  7 14:37 shared/HITS.pool.root.1
[2026-03-07 14:39:02]  *** Contents of shared directory: ***
[2026-03-07 14:39:02] total 402572
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd 211845477 Mar  7 10:42 ATLAS.root_0
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 10:42 start_atlas.sh
[2026-03-07 14:39:02] -rw-r--r-- 2 whitlerd whitlerd    597971 Mar  7 10:42 input.tar.gz
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd 197324466 Mar  7 14:37 HITS.pool.root.1
[2026-03-07 14:39:02] -rw------- 1 whitlerd whitlerd   2437120 Mar  7 14:39 result.tar.gz
14:39:03 (1909283): run_atlas exited; CPU time 55669.684423
14:39:03 (1909283): called boinc_finish(0)

</stderr_txt>
]]>

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