Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:28 (902267): wrapper (7.7.26015): starting
10:54:28 (902267): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 10:54:28] Arguments: --nthreads 8
[2026-03-07 10:54:28] Threads: 8
[2026-03-07 10:54:28] Checking for CVMFS
[2026-03-07 10:54:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 10:54:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 10:54:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 10:54:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 10:54:29] 2.13.3.0 12846 175649 433116 157005 0 638 24247403 32935937 42477 16776704 0 851839201 99.543 1077075401 35843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-07 10:54:29] CVMFS is ok
[2026-03-07 10:54:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 10:54:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 10:54:29] Further information can be found at the LHC@home message board.
[2026-03-07 10:54:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 10:54:29] Checking for apptainer binary...
[2026-03-07 10:54:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 10:54:29] Running /usr/bin/apptainer --version
[2026-03-07 10:54:29] apptainer version 1.4.5-2.el9
[2026-03-07 10:54:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 10:54:29] c7-16-9.aglt2.org
[2026-03-07 10:54:29] apptainer works
[2026-03-07 10:54:29] Set ATHENA_PROC_NUMBER=8
[2026-03-07 10:54:29] Set ATHENA_CORE_NUMBER=8
[2026-03-07 10:54:30] Starting ATLAS job with PandaID=7032959109
[2026-03-07 10:54:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 23:42:24]  *** The last 200 lines of the pilot log: ***
[2026-03-07 23:42:24] 2026-03-08 04:41:14,734 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7032959109/jobReport.json
[2026-03-07 23:42:24] 2026-03-08 04:41:14,737 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-07 23:42:24] 2026-03-08 04:41:14,737 | INFO     | this job has now completed (state=finished)
[2026-03-07 23:42:24] 2026-03-08 04:41:14,737 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 23:42:24] 2026-03-08 04:41:14,737 | INFO     | log transfer has been attempted: DONE
[2026-03-07 23:42:24] 2026-03-08 04:41:14,737 | INFO     | job 7032959109 has finished - writing final server update
[2026-03-07 23:42:24] 2026-03-08 04:41:14,756 | INFO     | total number of processed events: 400 (read)
[2026-03-07 23:42:24] 2026-03-08 04:41:14,848 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7032959109/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:42:24] 2026-03-08 04:41:14,849 | INFO     | extracted standard info from prmon json
[2026-03-07 23:42:24] 2026-03-08 04:41:14,849 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 23:42:24] 2026-03-08 04:41:14,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 23:42:24] 2026-03-08 04:41:14,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 23:42:24] 2026-03-08 04:41:14,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 23:42:24] 2026-03-08 04:41:14,910 | INFO     | fitting pss+swap vs Time
[2026-03-07 23:42:24] 2026-03-08 04:41:14,916 | INFO     | sum of square deviations: 132392493899.23512
[2026-03-07 23:42:24] 2026-03-08 04:41:14,985 | INFO     | sum of deviations: 292699038400.9765
[2026-03-07 23:42:24] 2026-03-08 04:41:14,986 | INFO     | mean x: 1772921923.0318725
[2026-03-07 23:42:24] 2026-03-08 04:41:14,986 | INFO     | mean y: 2534765.250996016
[2026-03-07 23:42:24] 2026-03-08 04:41:14,986 | INFO     | intersect: -3917117525.8101754
[2026-03-07 23:42:24] 2026-03-08 04:41:14,996 | INFO     | chi2: 3.310167625714789
[2026-03-07 23:42:24] 2026-03-08 04:41:14,997 | INFO     | sum of square deviations: 129772675354.22993
[2026-03-07 23:42:24] 2026-03-08 04:41:15,058 | INFO     | sum of deviations: 338601481715.25665
[2026-03-07 23:42:24] 2026-03-08 04:41:15,058 | INFO     | mean x: 1772921770.5320857
[2026-03-07 23:42:24] 2026-03-08 04:41:15,069 | INFO     | mean y: 2537421.9893048126
[2026-03-07 23:42:24] 2026-03-08 04:41:15,069 | INFO     | intersect: -4623351169.956359
[2026-03-07 23:42:24] 2026-03-08 04:41:15,070 | INFO     | chi2: 2.612127642983151
[2026-03-07 23:42:24] 2026-03-08 04:41:15,070 | INFO     | current chi2=2.612127642983151 (change=21.08775330013402 %)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,070 | INFO     | right removable region: 747
[2026-03-07 23:42:24] 2026-03-08 04:41:15,071 | INFO     | sum of square deviations: 129772660714.22993
[2026-03-07 23:42:24] 2026-03-08 04:41:15,113 | INFO     | sum of deviations: 102008976374.59091
[2026-03-07 23:42:24] 2026-03-08 04:41:15,113 | INFO     | mean x: 1772922075.5320857
[2026-03-07 23:42:24] 2026-03-08 04:41:15,114 | INFO     | mean y: 2545849.7045454546
[2026-03-07 23:42:24] 2026-03-08 04:41:15,114 | INFO     | intersect: -1391075619.7295945
[2026-03-07 23:42:24] 2026-03-08 04:41:15,120 | INFO     | chi2: 0.8468432504790007
[2026-03-07 23:42:24] 2026-03-08 04:41:15,120 | INFO     | current chi2=0.8468432504790007 (change=74.41690735235392 %)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,121 | INFO     | sum of square deviations: 127187618879.22505
[2026-03-07 23:42:24] 2026-03-08 04:41:15,138 | INFO     | monitor loop #2389: job 0:7032959109 is in state 'finished'
[2026-03-07 23:42:24] 2026-03-08 04:41:15,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,167 | INFO     | sum of deviations: 60641980664.91786
[2026-03-07 23:42:24] 2026-03-08 04:41:15,168 | INFO     | mean x: 1772922228.0323014
[2026-03-07 23:42:24] 2026-03-08 04:41:15,168 | INFO     | mean y: 2548287.5450874832
[2026-03-07 23:42:24] 2026-03-08 04:41:15,168 | INFO     | intersect: -842766031.7270637
[2026-03-07 23:42:24] 2026-03-08 04:41:15,169 | INFO     | chi2: 0.7439585747403302
[2026-03-07 23:42:24] 2026-03-08 04:41:15,169 | INFO     | current chi2=0.7439585747403302 (change=12.149199474693303 %)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,169 | INFO     | left removable region: 20
[2026-03-07 23:42:24] 2026-03-08 04:41:15,170 | INFO     | sum of square deviations: 119146591559.20721
[2026-03-07 23:42:24] 2026-03-08 04:41:15,180 | INFO     | sum of deviations: 101730252306.4622
[2026-03-07 23:42:24] 2026-03-08 04:41:15,180 | INFO     | mean x: 1772922350.0330124
[2026-03-07 23:42:24] 2026-03-08 04:41:15,180 | INFO     | mean y: 2551368.9807427786
[2026-03-07 23:42:24] 2026-03-08 04:41:15,180 | INFO     | intersect: -1511212773.3950675
[2026-03-07 23:42:24] 2026-03-08 04:41:15,181 | INFO     | chi2: 0.017196907353295876
[2026-03-07 23:42:24] 2026-03-08 04:41:15,181 | INFO     | current memory leak: 0.85 B/s (using 727 data points, chi2=0.02)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,182 | INFO     | could have reported an average CPU frequency of 3246 MHz (29 samples)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,182 | INFO     | ..............................
[2026-03-07 23:42:24] 2026-03-08 04:41:15,182 | INFO     | . Timing measurements:
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . get job = 0 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . initial setup = 24 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . payload setup = 24 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . stage-in = 0 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . payload execution = 45888 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . stage-out = 6 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | . log creation = 0 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,183 | INFO     | ..............................
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | 
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | job summary report
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | --------------------------------------------------
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | PanDA job id: 7032959109
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | task id: 48842579
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | errors: (none)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | pilot state: finished 
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | transexitcode: 0
[2026-03-07 23:42:24] 2026-03-08 04:41:15,827 | INFO     | exeerrorcode: 0
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | exeerrordiag: 
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | exitcode: 0
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | exitmsg: OK
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | cpuconsumptiontime: 88472 s
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | nevents: 400
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | neventsw: 0
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | pid: 917664
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | pgrp: 917664
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | corecount: 8
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | event service: False
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | sizes: {0: 2295380, 1: 2295464, 2: 2256674, 3: 2295953, 14: 2295953, 45917: 2340756, 45918: 2340883, 45925: 2349937, 45928: 2350187}
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | --------------------------------------------------
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | 
[2026-03-07 23:42:24] 2026-03-08 04:41:15,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-07 23:42:24] 2026-03-08 04:41:15,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,876 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 23:42:24] 2026-03-08 04:41:15,877 | INFO     | job 7032959109 has completed (purged errors)
[2026-03-07 23:42:24] 2026-03-08 04:41:15,877 | INFO     | overall cleanup function is called
[2026-03-07 23:42:24] 2026-03-08 04:41:16,887 | INFO     | --- collectZombieJob: --- 10, [917664]
[2026-03-07 23:42:24] 2026-03-08 04:41:16,887 | INFO     | zombie collector waiting for pid 917664
[2026-03-07 23:42:24] 2026-03-08 04:41:16,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 23:42:24] 2026-03-08 04:41:16,887 | INFO     | collected zombie processes
[2026-03-07 23:42:24] 2026-03-08 04:41:16,887 | INFO     | will attempt to kill all subprocesses of pid=917664
[2026-03-07 23:42:24] 2026-03-08 04:41:19,016 | INFO     | process IDs to be killed: [917664] (in reverse order)
[2026-03-07 23:42:24] 2026-03-08 04:41:19,355 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 23:42:24] 2026-03-08 04:41:19,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 23:42:24] 2026-03-08 04:41:19,382 | INFO     | did not find any defunct processes belonging to 917664
[2026-03-07 23:42:24] 2026-03-08 04:41:19,410 | INFO     | did not find any defunct processes belonging to 917664
[2026-03-07 23:42:24] 2026-03-08 04:41:19,411 | INFO     | ready for new job
[2026-03-07 23:42:24] 2026-03-08 04:41:19,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 23:42:24] 2026-03-08 04:41:19,414 | INFO     | **************************************
[2026-03-07 23:42:24] 2026-03-08 04:41:19,414 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 23:42:24] 2026-03-08 04:41:19,414 | INFO     | **************************************
[2026-03-07 23:42:24] 2026-03-08 04:41:19,414 | INFO     | 
[2026-03-07 23:42:24] 2026-03-08 04:41:19,419 | INFO     | architecture information:
[2026-03-07 23:42:24] 2026-03-08 04:41:19,431 | INFO     | executing command: cat /etc/os-release
[2026-03-07 23:42:24] 2026-03-08 04:41:19,484 | INFO     | cat /etc/os-release:
[2026-03-07 23:42:24] NAME="CentOS Linux"
[2026-03-07 23:42:24] VERSION="7 (Core)"
[2026-03-07 23:42:24] ID="centos"
[2026-03-07 23:42:24] ID_LIKE="rhel fedora"
[2026-03-07 23:42:24] VERSION_ID="7"
[2026-03-07 23:42:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 23:42:24] ANSI_COLOR="0;31"
[2026-03-07 23:42:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 23:42:24] HOME_URL="https://www.centos.org/"
[2026-03-07 23:42:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 23:42:24] 
[2026-03-07 23:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 23:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 23:42:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 23:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 23:42:24] 
[2026-03-07 23:42:24] 2026-03-08 04:41:19,484 | INFO     | **************************************
[2026-03-07 23:42:24] 2026-03-08 04:41:19,988 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-07 23:42:24] 2026-03-08 04:41:20,048 | INFO     | sufficient remaining disk space (72642199552 B)
[2026-03-07 23:42:24] 2026-03-08 04:41:20,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 23:42:24] 2026-03-08 04:41:20,048 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 23:42:24] 2026-03-08 04:41:20,048 | INFO     | update_server=False
[2026-03-07 23:42:24] 2026-03-08 04:41:20,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 23:42:24] 2026-03-08 04:41:20,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 23:42:24] 2026-03-08 04:41:20,153 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 23:42:24] 2026-03-08 04:41:20,153 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 23:42:24] 2026-03-08 04:41:20,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:42:24] 2026-03-08 04:41:20,153 | INFO     | will abort loop
[2026-03-07 23:42:24] 2026-03-08 04:41:20,412 | INFO     | all data control threads have been joined
[2026-03-07 23:42:24] 2026-03-08 04:41:20,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:42:24] 2026-03-08 04:41:20,567 | INFO     | all payload control threads have been joined
[2026-03-07 23:42:24] 2026-03-08 04:41:20,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 23:42:24] 2026-03-08 04:41:21,057 | INFO     | [job] retrieve thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,080 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,166 | INFO     | [job] job monitor thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,418 | INFO     | [data] control thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,539 | INFO     | [job] queue monitor thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,581 | INFO     | [payload] control thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,719 | INFO     | all job control threads have been joined
[2026-03-07 23:42:24] 2026-03-08 04:41:21,899 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,910 | INFO     | [data] copytool_in thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,921 | INFO     | [job] validate thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,922 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:21,999 | INFO     | [payload] failed_post thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:22,056 | INFO     | [data] copytool_out thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:22,493 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:22,594 | INFO     | [payload] validate_post thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:22,725 | INFO     | [job] control thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:24,778 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 23:42:24] 2026-03-08 04:41:49,479 | INFO     | PID=906492 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 23:42:24] 2026-03-08 04:41:49,479 | INFO     | .. there are 43 such processes running
[2026-03-07 23:42:24] 2026-03-08 04:41:49,480 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 23:42:24] 2026-03-08 04:41:49,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 23:42:24] 2026-03-08 04:41:49,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 23:42:24] 2026-03-08 04:41:56,439 | INFO     | [monitor] cgroup control has ended
[2026-03-07 23:42:24] 2026-03-08 04:41:57,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155452196672)>', '<ExcThread(monitor, started 140154975020800)>']
[2026-03-07 23:42:24] 2026-03-08 04:41:58,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 23:42:24] 2026-03-08 04:41:58,535 | INFO     | [monitor] control thread has ended
[2026-03-07 23:42:24] 2026-03-08 04:42:02,733 | INFO     | all workflow threads have been joined
[2026-03-07 23:42:24] 2026-03-08 04:42:02,733 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 23:42:24] 2026-03-08 04:42:02,733 | INFO     | traces error code: 0
[2026-03-07 23:42:24] 2026-03-08 04:42:02,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 23:42:24] 2026-03-08 04:42:03,179 [wrapper] ==== pilot stdout END ====
[2026-03-07 23:42:24] 2026-03-08 04:42:03,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 23:42:24] 2026-03-08 04:42:03,212 [wrapper] pilotpid: 906492
[2026-03-07 23:42:24] 2026-03-08 04:42:03,215 [wrapper] Pilot exit status: 0
[2026-03-07 23:42:24] 2026-03-08 04:42:03,236 [wrapper] pandaids: 7032959109
[2026-03-07 23:42:24] 2026-03-08 04:42:03,436 [wrapper] cleanup supervisor_pilot 2218401 906493
[2026-03-07 23:42:24] 2026-03-08 04:42:03,468 [wrapper] Test setup, not cleaning
[2026-03-07 23:42:24] 2026-03-08 04:42:03,489 [wrapper] apfmon messages muted
[2026-03-07 23:42:24] 2026-03-08 04:42:03,526 [wrapper] ==== wrapper stdout END ====
[2026-03-07 23:42:24] 2026-03-08 04:42:03,529 [wrapper] ==== wrapper stderr END ====
[2026-03-07 23:42:24]  *** Error codes and diagnostics ***
[2026-03-07 23:42:24]     "exeErrorCode": 0,
[2026-03-07 23:42:24]     "exeErrorDiag": "",
[2026-03-07 23:42:24]     "pilotErrorCode": 0,
[2026-03-07 23:42:24]     "pilotErrorDiag": "",
[2026-03-07 23:42:24]  *** Listing of results directory ***
[2026-03-07 23:42:24] total 609172
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 05:26 pilot3.tar.gz
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 05:26 queuedata.json
[2026-03-07 23:42:24] -rwx------. 1 boincer umatlas     36322 Feb 28 05:26 runpilot2-wrapper.sh
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas       100 Mar  7 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 23:42:24] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  7 10:54 run_atlas
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas       105 Mar  7 10:54 job.xml
[2026-03-07 23:42:24] -rw-r--r--. 2 boincer umatlas 294945786 Mar  7 10:54 EVNT.48448685._000001.pool.root.1
[2026-03-07 23:42:24] drwxrwx--x. 2 boincer umatlas      4096 Mar  7 10:54 shared
[2026-03-07 23:42:24] -rw-r--r--. 2 boincer umatlas    597960 Mar  7 10:54 input.tar.gz
[2026-03-07 23:42:24] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 10:54 start_atlas.sh
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas         0 Mar  7 10:54 boinc_lockfile
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas      2608 Mar  7 10:54 pandaJob.out
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas        57 Mar  7 10:54 setup.sh.local
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas    999177 Mar  7 10:55 agis_schedconf.cvmfs.json
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas       429 Mar  7 10:55 workernode_map.json
[2026-03-07 23:42:24] drwx------. 5 boincer umatlas      4096 Mar  7 10:55 pilot3
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas      6946 Mar  7 23:39 init_data.xml
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas 312816027 Mar  7 23:40 HITS.48842579._000019.pool.root.1
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas       531 Mar  7 23:40 boinc_task_state.xml
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas      1044 Mar  7 23:41 memory_monitor_summary.json
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas   1521291 Mar  7 23:41 agis_ddmendpoints.agis.ALL.json
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas    830631 Mar  7 23:41 log.48842579._000019.job.log.tgz.1
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas      6336 Mar  7 23:41 heartbeat.json
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas        95 Mar  7 23:41 pilot_heartbeat.json
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas      5005 Mar  7 23:42 pilotlog.txt
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas   5214181 Mar  7 23:42 log.48842579._000019.job.log.1
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas       357 Mar  7 23:42 output.list
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas       620 Mar  7 23:42 runtime_log
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas   6062080 Mar  7 23:42 result.tar.gz
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas      9337 Mar  7 23:42 runtime_log.err
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas       662 Mar  7 23:42 nAuNDmNiWG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCq6KDmciKuzm.diag
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas        28 Mar  7 23:42 wrapper_checkpoint.txt
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas      8192 Mar  7 23:42 boinc_mmap_file
[2026-03-07 23:42:24] -rw-r--r--. 1 boincer umatlas     21376 Mar  7 23:42 stderr.txt
[2026-03-07 23:42:24] HITS file was successfully produced:
[2026-03-07 23:42:24] -rw-------. 1 boincer umatlas 312816027 Mar  7 23:40 shared/HITS.pool.root.1
[2026-03-07 23:42:25]  *** Contents of shared directory: ***
[2026-03-07 23:42:25] total 600052
[2026-03-07 23:42:25] -rw-r--r--. 2 boincer umatlas 294945786 Mar  7 10:54 ATLAS.root_0
[2026-03-07 23:42:25] -rw-r--r--. 2 boincer umatlas    597960 Mar  7 10:54 input.tar.gz
[2026-03-07 23:42:25] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 10:54 start_atlas.sh
[2026-03-07 23:42:25] -rw-------. 1 boincer umatlas 312816027 Mar  7 23:40 HITS.pool.root.1
[2026-03-07 23:42:25] -rw-------. 1 boincer umatlas   6062080 Mar  7 23:42 result.tar.gz
23:42:27 (902267): run_atlas exited; CPU time 90788.100126
23:42:27 (902267): called boinc_finish(0)

</stderr_txt>
]]>

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