Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:52:12 (628517): wrapper (7.7.26015): starting
11:52:12 (628517): wrapper: running run_atlas (--nthreads 9)
[2026-03-07 11:52:12] Arguments: --nthreads 9
[2026-03-07 11:52:12] Threads: 9
[2026-03-07 11:52:12] Checking for CVMFS
[2026-03-07 11:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 11:52:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 11:52:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 11:52:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 11:52:13] 2.13.3.0 1019478 99274 134460 157007 3 121 25200278 39288832 3206 16776704 0 58244396 99.590 66735695 36933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 11:52:13] CVMFS is ok
[2026-03-07 11:52:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 11:52:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 11:52:13] Further information can be found at the LHC@home message board.
[2026-03-07 11:52:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 11:52:13] Checking for apptainer binary...
[2026-03-07 11:52:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 11:52:13] Running /usr/bin/apptainer --version
[2026-03-07 11:52:13] apptainer version 1.4.5-2.el9
[2026-03-07 11:52:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 11:52:14] c-210-25.aglt2.org
[2026-03-07 11:52:14] apptainer works
[2026-03-07 11:52:14] Set ATHENA_PROC_NUMBER=9
[2026-03-07 11:52:14] Set ATHENA_CORE_NUMBER=9
[2026-03-07 11:52:14] Starting ATLAS job with PandaID=7039073942
[2026-03-07 11:52:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:27:07 (914547): wrapper (7.7.26015): starting
14:27:07 (914547): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 14:27:07] Arguments: --nthreads 8
[2026-03-07 14:27:07] Threads: 8
[2026-03-07 14:27:07] This job has been restarted, cleaning up previous attempt
[2026-03-07 14:27:07] Checking for CVMFS
[2026-03-07 14:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 14:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 14:27:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 14:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 14:27:08] 2.13.3.0 1019478 99429 139088 157012 1 230 25475453 39288833 3171 16776704 0 59280344 99.597 66742850 36932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 14:27:08] CVMFS is ok
[2026-03-07 14:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 14:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 14:27:08] Further information can be found at the LHC@home message board.
[2026-03-07 14:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 14:27:08] Checking for apptainer binary...
[2026-03-07 14:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 14:27:08] Running /usr/bin/apptainer --version
[2026-03-07 14:27:08] apptainer version 1.4.5-2.el9
[2026-03-07 14:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 14:27:08] c-210-25.aglt2.org
[2026-03-07 14:27:08] apptainer works
[2026-03-07 14:27:08] Set ATHENA_PROC_NUMBER=8
[2026-03-07 14:27:08] Set ATHENA_CORE_NUMBER=8
[2026-03-07 14:27:08] Starting ATLAS job with PandaID=7039073942
[2026-03-07 14:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 23:19:01]  *** The last 200 lines of the pilot log: ***
[2026-03-07 23:19:01] 2026-03-08 04:11:09,470 | INFO     | this job has now completed (state=finished)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,470 | INFO     | log transfer has been attempted: DONE
[2026-03-07 23:19:01] 2026-03-08 04:11:09,470 | INFO     | job 7039073942 has finished - writing final server update
[2026-03-07 23:19:01] 2026-03-08 04:11:09,475 | INFO     | total number of processed events: 400 (read)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,485 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7039073942/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,486 | INFO     | extracted standard info from prmon json
[2026-03-07 23:19:01] 2026-03-08 04:11:09,486 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 23:19:01] 2026-03-08 04:11:09,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 23:19:01] 2026-03-08 04:11:09,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 23:19:01] 2026-03-08 04:11:09,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 23:19:01] 2026-03-08 04:11:09,500 | INFO     | fitting pss+swap vs Time
[2026-03-07 23:19:01] 2026-03-08 04:11:09,501 | INFO     | sum of square deviations: 42352194432.66008
[2026-03-07 23:19:01] 2026-03-08 04:11:09,508 | INFO     | sum of deviations: 36609752966.66016
[2026-03-07 23:19:01] 2026-03-08 04:11:09,509 | INFO     | mean x: 1772927338.7572815
[2026-03-07 23:19:01] 2026-03-08 04:11:09,509 | INFO     | mean y: 2518432.5572815533
[2026-03-07 23:19:01] 2026-03-08 04:11:09,509 | INFO     | intersect: -1530021563.7572756
[2026-03-07 23:19:01] 2026-03-08 04:11:09,510 | INFO     | chi2: 1.6178893614359002
[2026-03-07 23:19:01] 2026-03-08 04:11:09,511 | INFO     | sum of square deviations: 41130500185.35124
[2026-03-07 23:19:01] 2026-03-08 04:11:09,517 | INFO     | sum of deviations: 35887279046.45297
[2026-03-07 23:19:01] 2026-03-08 04:11:09,517 | INFO     | mean x: 1772927186.2568626
[2026-03-07 23:19:01] 2026-03-08 04:11:09,517 | INFO     | mean y: 2518342.370588235
[2026-03-07 23:19:01] 2026-03-08 04:11:09,518 | INFO     | intersect: -1544400182.2162623
[2026-03-07 23:19:01] 2026-03-08 04:11:09,518 | INFO     | chi2: 1.6179806050078906
[2026-03-07 23:19:01] 2026-03-08 04:11:09,519 | INFO     | current chi2=1.6179806050078906 (change=-0.005639666973855252 %)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,519 | INFO     | right removable region: 509
[2026-03-07 23:19:01] 2026-03-08 04:11:09,519 | INFO     | sum of square deviations: 41130418750.79206
[2026-03-07 23:19:01] 2026-03-08 04:11:09,526 | INFO     | sum of deviations: -45474461756.10195
[2026-03-07 23:19:01] 2026-03-08 04:11:09,526 | INFO     | mean x: 1772927491.2627451
[2026-03-07 23:19:01] 2026-03-08 04:11:09,526 | INFO     | mean y: 2528636.5156862745
[2026-03-07 23:19:01] 2026-03-08 04:11:09,527 | INFO     | intersect: 1962706185.0658553
[2026-03-07 23:19:01] 2026-03-08 04:11:09,527 | INFO     | chi2: 0.1722550015887396
[2026-03-07 23:19:01] 2026-03-08 04:11:09,528 | INFO     | current chi2=0.1722550015887396 (change=89.35310376008277 %)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,528 | INFO     | sum of square deviations: 39932426786.958405
[2026-03-07 23:19:01] 2026-03-08 04:11:09,535 | INFO     | sum of deviations: -46040010820.17229
[2026-03-07 23:19:01] 2026-03-08 04:11:09,535 | INFO     | mean x: 1772927643.7643564
[2026-03-07 23:19:01] 2026-03-08 04:11:09,535 | INFO     | mean y: 2528702.023762376
[2026-03-07 23:19:01] 2026-03-08 04:11:09,535 | INFO     | intersect: 2046622048.4604926
[2026-03-07 23:19:01] 2026-03-08 04:11:09,536 | INFO     | chi2: 0.15826594931546062
[2026-03-07 23:19:01] 2026-03-08 04:11:09,536 | INFO     | current chi2=0.15826594931546062 (change=8.121129804217803 %)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,536 | INFO     | left removable region: 20
[2026-03-07 23:19:01] 2026-03-08 04:11:09,537 | INFO     | sum of square deviations: 36255842335.059235
[2026-03-07 23:19:01] 2026-03-08 04:11:09,543 | INFO     | sum of deviations: -25423579052.431477
[2026-03-07 23:19:01] 2026-03-08 04:11:09,544 | INFO     | mean x: 1772927765.7525563
[2026-03-07 23:19:01] 2026-03-08 04:11:09,544 | INFO     | mean y: 2525955.145194274
[2026-03-07 23:19:01] 2026-03-08 04:11:09,544 | INFO     | intersect: 1245750944.6601756
[2026-03-07 23:19:01] 2026-03-08 04:11:09,545 | INFO     | chi2: 0.13559904182238633
[2026-03-07 23:19:01] 2026-03-08 04:11:09,545 | INFO     | current memory leak: -0.70 B/s (using 489 data points, chi2=0.14)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | ..............................
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . Timing measurements:
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . get job = 0 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . initial setup = 1 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . payload setup = 5 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . stage-in = 0 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,546 | INFO     | . payload execution = 31404 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,547 | INFO     | . stage-out = 2 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,547 | INFO     | . log creation = 0 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,547 | INFO     | ..............................
[2026-03-07 23:19:01] 2026-03-08 04:11:09,651 | INFO     | 
[2026-03-07 23:19:01] 2026-03-08 04:11:09,651 | INFO     | job summary report
[2026-03-07 23:19:01] 2026-03-08 04:11:09,651 | INFO     | --------------------------------------------------
[2026-03-07 23:19:01] 2026-03-08 04:11:09,651 | INFO     | PanDA job id: 7039073942
[2026-03-07 23:19:01] 2026-03-08 04:11:09,651 | INFO     | task id: 48955015
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | errors: (none)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | pilot state: finished 
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | transexitcode: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | exeerrorcode: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | exeerrordiag: 
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | exitcode: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | exitmsg: OK
[2026-03-07 23:19:01] 2026-03-08 04:11:09,652 | INFO     | cpuconsumptiontime: 47335 s
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | nevents: 400
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | neventsw: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | pid: 926854
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | pgrp: 926854
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | corecount: 8
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | event service: False
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | sizes: {0: 2295374, 1: 2295835, 12: 2295835, 31413: 2334252, 31416: 2343250, 31419: 2343628}
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | --------------------------------------------------
[2026-03-07 23:19:01] 2026-03-08 04:11:09,653 | INFO     | 
[2026-03-07 23:19:01] 2026-03-08 04:11:09,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-07 23:19:01] 2026-03-08 04:11:09,672 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,672 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,675 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 23:19:01] 2026-03-08 04:11:09,675 | INFO     | job 7039073942 has completed (purged errors)
[2026-03-07 23:19:01] 2026-03-08 04:11:09,675 | INFO     | overall cleanup function is called
[2026-03-07 23:19:01] 2026-03-08 04:11:10,493 | WARNING  | process 926854 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 23:19:01] 2026-03-08 04:11:10,687 | INFO     | --- collectZombieJob: --- 10, [926854]
[2026-03-07 23:19:01] 2026-03-08 04:11:10,687 | INFO     | zombie collector waiting for pid 926854
[2026-03-07 23:19:01] 2026-03-08 04:11:10,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 23:19:01] 2026-03-08 04:11:10,687 | INFO     | collected zombie processes
[2026-03-07 23:19:01] 2026-03-08 04:11:10,687 | INFO     | will attempt to kill all subprocesses of pid=926854
[2026-03-07 23:19:01] 2026-03-08 04:11:10,693 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:19:01] 2026-03-08 04:11:11,155 | INFO     | process IDs to be killed: [926854] (in reverse order)
[2026-03-07 23:19:01] 2026-03-08 04:11:11,273 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 23:19:01] 2026-03-08 04:11:11,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 23:19:01] 2026-03-08 04:11:11,281 | INFO     | did not find any defunct processes belonging to 926854
[2026-03-07 23:19:01] 2026-03-08 04:11:11,288 | INFO     | did not find any defunct processes belonging to 926854
[2026-03-07 23:19:01] 2026-03-08 04:11:11,289 | INFO     | ready for new job
[2026-03-07 23:19:01] 2026-03-08 04:11:11,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 23:19:01] 2026-03-08 04:11:11,292 | INFO     | **************************************
[2026-03-07 23:19:01] 2026-03-08 04:11:11,292 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 23:19:01] 2026-03-08 04:11:11,292 | INFO     | **************************************
[2026-03-07 23:19:01] 2026-03-08 04:11:11,292 | INFO     | 
[2026-03-07 23:19:01] 2026-03-08 04:11:11,302 | INFO     | architecture information:
[2026-03-07 23:19:01] 2026-03-08 04:11:11,303 | INFO     | executing command: cat /etc/os-release
[2026-03-07 23:19:01] 2026-03-08 04:11:11,337 | INFO     | cat /etc/os-release:
[2026-03-07 23:19:01] NAME="CentOS Linux"
[2026-03-07 23:19:01] VERSION="7 (Core)"
[2026-03-07 23:19:01] ID="centos"
[2026-03-07 23:19:01] ID_LIKE="rhel fedora"
[2026-03-07 23:19:01] VERSION_ID="7"
[2026-03-07 23:19:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 23:19:01] ANSI_COLOR="0;31"
[2026-03-07 23:19:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 23:19:01] HOME_URL="https://www.centos.org/"
[2026-03-07 23:19:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 23:19:01] 
[2026-03-07 23:19:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 23:19:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 23:19:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 23:19:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 23:19:01] 
[2026-03-07 23:19:01] 2026-03-08 04:11:11,337 | INFO     | **************************************
[2026-03-07 23:19:01] 2026-03-08 04:11:11,362 | INFO     | number of running child processes to parent process 926854: 1
[2026-03-07 23:19:01] 2026-03-08 04:11:11,362 | INFO     | maximum number of monitored processes: 6
[2026-03-07 23:19:01] 2026-03-08 04:11:11,362 | INFO     | aborting job monitoring since job object (job id=7039073942) has expired
[2026-03-07 23:19:01] 2026-03-08 04:11:11,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-07 23:19:01] 2026-03-08 04:11:11,968 | INFO     | sufficient remaining disk space (52431945728 B)
[2026-03-07 23:19:01] 2026-03-08 04:11:11,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 23:19:01] 2026-03-08 04:11:11,969 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 23:19:01] 2026-03-08 04:11:11,969 | INFO     | update_server=False
[2026-03-07 23:19:01] 2026-03-08 04:11:11,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 23:19:01] 2026-03-08 04:11:11,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:19:01] 2026-03-08 04:11:11,988 | INFO     | will abort loop
[2026-03-07 23:19:01] 2026-03-08 04:11:12,043 | INFO     | all payload control threads have been joined
[2026-03-07 23:19:01] 2026-03-08 04:11:12,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 23:19:01] 2026-03-08 04:11:12,840 | INFO     | all data control threads have been joined
[2026-03-07 23:19:01] 2026-03-08 04:11:12,975 | INFO     | [job] retrieve thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:12,994 | INFO     | [job] job monitor thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,049 | INFO     | [payload] control thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,063 | INFO     | all job control threads have been joined
[2026-03-07 23:19:01] 2026-03-08 04:11:13,768 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,782 | INFO     | [payload] failed_post thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,824 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,825 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:13,855 | INFO     | [data] control thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,069 | INFO     | [job] control thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,247 | INFO     | [data] copytool_in thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,304 | INFO     | [data] copytool_out thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,367 | INFO     | [job] validate thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,485 | INFO     | [payload] validate_post thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:14,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:19:01] 2026-03-08 04:11:15,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 23:19:01] 2026-03-08 04:11:15,671 | INFO     | [job] queue monitor thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:15,927 | INFO     | [monitor] cgroup control has ended
[2026-03-07 23:19:01] 2026-03-08 04:11:19,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:22,243 | INFO     | job.realtimelogging is not enabled
[2026-03-07 23:19:01] 2026-03-08 04:11:23,251 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 23:19:01] 2026-03-08 04:11:23,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720348714816)>', '<ExcThread(monitor, started 139719916648192)>']
[2026-03-07 23:19:01] 2026-03-08 04:11:28,987 | INFO     | all workflow threads have been joined
[2026-03-07 23:19:01] 2026-03-08 04:11:28,987 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 23:19:01] 2026-03-08 04:11:28,987 | INFO     | traces error code: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:28,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 23:19:01] 2026-03-08 04:11:41,109 | INFO     | PID=921924 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 23:19:01] 2026-03-08 04:11:41,109 | INFO     | .. there are 7 such processes running
[2026-03-07 23:19:01] 2026-03-08 04:11:41,110 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 23:19:01] 2026-03-08 04:11:41,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 23:19:01] 2026-03-08 04:11:41,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 23:19:01] 2026-03-08 04:11:41,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 23:19:01] 2026-03-08 04:11:41,110 | INFO     | [monitor] control thread has ended
[2026-03-07 23:19:01] 2026-03-08 04:11:41,228 [wrapper] ==== pilot stdout END ====
[2026-03-07 23:19:01] 2026-03-08 04:11:41,230 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 23:19:01] 2026-03-08 04:11:41,232 [wrapper] pilotpid: 921924
[2026-03-07 23:19:01] 2026-03-08 04:11:41,234 [wrapper] Pilot exit status: 0
[2026-03-07 23:19:01] 2026-03-08 04:11:41,247 [wrapper] pandaids: 7039073942 7039073942
[2026-03-07 23:19:01] 2026-03-08 04:11:41,290 [wrapper] cleanup supervisor_pilot 1740191 921925
[2026-03-07 23:19:01] 2026-03-08 04:11:41,293 [wrapper] Test setup, not cleaning
[2026-03-07 23:19:01] 2026-03-08 04:11:41,295 [wrapper] apfmon messages muted
[2026-03-07 23:19:01] 2026-03-08 04:11:41,297 [wrapper] ==== wrapper stdout END ====
[2026-03-07 23:19:01] 2026-03-08 04:11:41,299 [wrapper] ==== wrapper stderr END ====
[2026-03-07 23:19:01]  *** Error codes and diagnostics ***
[2026-03-07 23:19:01]     "exeErrorCode": 0,
[2026-03-07 23:19:01]     "exeErrorDiag": "",
[2026-03-07 23:19:01]     "pilotErrorCode": 0,
[2026-03-07 23:19:01]     "pilotErrorDiag": "",
[2026-03-07 23:19:01]  *** Listing of results directory ***
[2026-03-07 23:19:01] total 1052760
[2026-03-07 23:19:01] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-07 23:19:01] -rwx------. 1 boincer umatlas     36322 Mar  7 05:23 runpilot2-wrapper.sh
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 05:23 queuedata.json
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 05:23 pilot3.tar.gz
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas       100 Mar  7 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 23:19:01] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  7 11:52 run_atlas
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas       105 Mar  7 11:52 job.xml
[2026-03-07 23:19:01] -rw-r--r--. 3 boincer umatlas 441421080 Mar  7 11:52 EVNT.46701403._002180.pool.root.1
[2026-03-07 23:19:01] -rw-r--r--. 3 boincer umatlas 441421080 Mar  7 11:52 ATLAS.root_0
[2026-03-07 23:19:01] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 11:52 start_atlas.sh
[2026-03-07 23:19:01] drwxrwx--x. 2 boincer umatlas      4096 Mar  7 11:52 shared
[2026-03-07 23:19:01] -rw-r--r--. 2 boincer umatlas    597958 Mar  7 11:52 input.tar.gz
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas         0 Mar  7 11:52 boinc_lockfile
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas      2569 Mar  7 14:27 pandaJob.out
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas        57 Mar  7 14:27 setup.sh.local
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas    999177 Mar  7 14:27 agis_schedconf.cvmfs.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas       442 Mar  7 14:27 workernode_map.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas 181983439 Mar  7 23:10 HITS.48955015._006575.pool.root.1
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas       532 Mar  7 23:10 boinc_task_state.xml
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas      1047 Mar  7 23:11 memory_monitor_summary.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas   1521291 Mar  7 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas    681681 Mar  7 23:11 log.48955015._006575.job.log.tgz.1
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas      6403 Mar  7 23:11 heartbeat.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas       821 Mar  7 23:11 pilotlog.txt
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas        96 Mar  7 23:11 pilot_heartbeat.json
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas   3947980 Mar  7 23:11 log.48955015._006575.job.log.1
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas       357 Mar  7 23:11 output.list
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas       620 Mar  7 23:11 runtime_log
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas   4648960 Mar  7 23:11 result.tar.gz
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas      9427 Mar  7 23:11 runtime_log.err
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas       786 Mar  7 23:11 JROKDm5z3I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9VVLDmcH4hWo.diag
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas      6660 Mar  7 23:19 init_data.xml
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas      8192 Mar  7 23:19 boinc_mmap_file
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas        28 Mar  7 23:19 wrapper_checkpoint.txt
[2026-03-07 23:19:01] -rw-r--r--. 1 boincer umatlas     23454 Mar  7 23:19 stderr.txt
[2026-03-07 23:19:01] HITS file was successfully produced:
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas 181983439 Mar  7 23:10 shared/HITS.pool.root.1
[2026-03-07 23:19:01]  *** Contents of shared directory: ***
[2026-03-07 23:19:01] total 613944
[2026-03-07 23:19:01] -rw-r--r--. 3 boincer umatlas 441421080 Mar  7 11:52 ATLAS.root_0
[2026-03-07 23:19:01] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 11:52 start_atlas.sh
[2026-03-07 23:19:01] -rw-r--r--. 2 boincer umatlas    597958 Mar  7 11:52 input.tar.gz
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas 181983439 Mar  7 23:10 HITS.pool.root.1
[2026-03-07 23:19:01] -rw-------. 1 boincer umatlas   4648960 Mar  7 23:11 result.tar.gz
23:19:03 (914547): run_atlas exited; CPU time 48037.048910
23:19:03 (914547): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN