Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:42:44 (2648612): wrapper (7.7.26015): starting
15:42:44 (2648612): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 15:42:44] Arguments: --nthreads 4
[2026-03-09 15:42:44] Threads: 4
[2026-03-09 15:42:44] Checking for CVMFS
[2026-03-09 15:42:45] No cvmfs_config command found, will try listing directly
[2026-03-09 15:42:45] CVMFS is ok
[2026-03-09 15:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 15:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 15:42:45] Further information can be found at the LHC@home message board.
[2026-03-09 15:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:42:45] Checking for apptainer binary...
[2026-03-09 15:42:45] which: no apptainer in ((null))
[2026-03-09 15:42:45] apptainer is not installed, using version from CVMFS
[2026-03-09 15:42:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:42:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-09 15:42:45] apptainer works
[2026-03-09 15:42:45] Set ATHENA_PROC_NUMBER=4
[2026-03-09 15:42:45] Set ATHENA_CORE_NUMBER=4
[2026-03-09 15:42:45] Starting ATLAS job with PandaID=7039135189
[2026-03-09 15:42:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 17:06:04]  *** The last 200 lines of the pilot log: ***
[2026-03-09 17:06:04]  is_tar=False
[2026-03-09 17:06:04]  lfn=log.48955015._007452.job.log.tgz.1
[2026-03-09 17:06:04]  mtime=0
[2026-03-09 17:06:04]  protocol_id=None
[2026-03-09 17:06:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 17:06:04]  replicas=None
[2026-03-09 17:06:04]  scope=mc23_13p6TeV
[2026-03-09 17:06:04]  status=None
[2026-03-09 17:06:04]  status_code=0
[2026-03-09 17:06:04]  storage_token=
[2026-03-09 17:06:04]  surl=/var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7039135189/log.48955015._007452.job.log.tgz.1
[2026-03-09 17:06:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/c6/log.48955015._007452.job.log.tgz.1
[2026-03-09 17:06:04]  workdir=None
[2026-03-09 17:06:04] ]
[2026-03-09 17:06:04] 2026-03-09 16:05:27,022 | INFO     | transferring file log.48955015._007452.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7039135189/log.48955015._007452.job.log.tgz.1 to /var/lib/
[2026-03-09 17:06:04] 2026-03-09 16:05:27,022 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7039135189/log.48955015._007452.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/0/
[2026-03-09 17:06:04] 2026-03-09 16:05:27,047 | INFO     | adding to output.list: log.48955015._007452.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/c6/log.48955015._007452.job.log.tg
[2026-03-09 17:06:04] 2026-03-09 16:05:27,048 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 17:06:04] 2026-03-09 16:05:27,048 | INFO     | summary of transferred files:
[2026-03-09 17:06:04] 2026-03-09 16:05:27,048 | INFO     |  -- lfn=log.48955015._007452.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 17:06:04] 2026-03-09 16:05:27,048 | INFO     | stage-out finished correctly
[2026-03-09 17:06:04] 2026-03-09 16:05:28,332 | INFO     | time since job start (4919s) is within the limit (349056.0s)
[2026-03-09 17:06:04] 2026-03-09 16:05:29,421 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 17:06:04] 2026-03-09 16:05:30,337 | INFO     | time since job start (4921s) is within the limit (349056.0s)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,478 | INFO     | job 7039135189 has state=finished
[2026-03-09 17:06:04] 2026-03-09 16:05:31,479 | INFO     | preparing for final server update for job 7039135189 in state='finished'
[2026-03-09 17:06:04] 2026-03-09 16:05:31,479 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7039135189/jobReport.json
[2026-03-09 17:06:04] 2026-03-09 16:05:31,480 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/0/workernode_map.json
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | INFO     | this job has now completed (state=finished)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | INFO     | log transfer has been attempted: DONE
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | INFO     | job 7039135189 has finished - writing final server update
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19292/.job.ad'
[2026-03-09 17:06:04] 2026-03-09 16:05:31,481 | INFO     | total number of processed events: 400 (read)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,499 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7039135189/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,500 | INFO     | extracted standard info from prmon json
[2026-03-09 17:06:04] 2026-03-09 16:05:31,500 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 17:06:04] 2026-03-09 16:05:31,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 17:06:04] 2026-03-09 16:05:31,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 17:06:04] 2026-03-09 16:05:31,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 17:06:04] 2026-03-09 16:05:31,501 | INFO     | fitting pss+swap vs Time
[2026-03-09 17:06:04] 2026-03-09 16:05:31,501 | INFO     | sum of square deviations: 120605052.0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,501 | INFO     | sum of deviations: 210320253.00000006
[2026-03-09 17:06:04] 2026-03-09 16:05:31,501 | INFO     | mean x: 1773069966.0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,501 | INFO     | mean y: 2322131.4383561644
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | intersect: -3089691989.461169
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | chi2: 0.00021045552556987627
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | current memory leak: 1.74 B/s (using 73 data points, chi2=0.00)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | could have reported an average CPU frequency of 3567 MHz (6 samples)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | ..............................
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . Timing measurements:
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . get job = 0 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . initial setup = 19 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . payload setup = 22 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . stage-in = 0 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . payload execution = 4880 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . stage-out = 0 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | . log creation = 0 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,502 | INFO     | ..............................
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | 
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | job summary report
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | --------------------------------------------------
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | PanDA job id: 7039135189
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | task id: 48955015
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | errors: (none)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | pilot state: finished 
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | transexitcode: 0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | exeerrorcode: 0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | exeerrordiag: 
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | exitcode: 0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | exitmsg: OK
[2026-03-09 17:06:04] 2026-03-09 16:05:31,780 | INFO     | cpuconsumptiontime: 18535 s
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | nevents: 400
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | neventsw: 0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | pid: 2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | pgrp: 2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | corecount: 4
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | event service: False
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | sizes: {0: 2279866, 1: 2280270, 11: 2280270, 4906: 2306492, 4907: 2315514, 4909: 2315570, 4911: 2315892}
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | --------------------------------------------------
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | 
[2026-03-09 17:06:04] 2026-03-09 16:05:31,781 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 17:06:04] 2026-03-09 16:05:31,805 | INFO     | job 7039135189 has completed (purged errors)
[2026-03-09 17:06:04] 2026-03-09 16:05:31,805 | INFO     | overall cleanup function is called
[2026-03-09 17:06:04] 2026-03-09 16:05:32,778 | WARNING  | process 2667353 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 17:06:04] 2026-03-09 16:05:32,811 | INFO     | --- collectZombieJob: --- 10, [2667353]
[2026-03-09 17:06:04] 2026-03-09 16:05:32,811 | INFO     | zombie collector waiting for pid 2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:32,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 17:06:04] 2026-03-09 16:05:32,811 | INFO     | collected zombie processes
[2026-03-09 17:06:04] 2026-03-09 16:05:32,811 | INFO     | will attempt to kill all subprocesses of pid=2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:33,257 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:06:04] 2026-03-09 16:05:33,941 | INFO     | process IDs to be killed: [2667353] (in reverse order)
[2026-03-09 17:06:04] 2026-03-09 16:05:34,291 | INFO     | number of running child processes to parent process 2667353: 1
[2026-03-09 17:06:04] 2026-03-09 16:05:34,292 | INFO     | maximum number of monitored processes: 6
[2026-03-09 17:06:04] 2026-03-09 16:05:34,292 | INFO     | aborting job monitoring since job object (job id=7039135189) has expired
[2026-03-09 17:06:04] 2026-03-09 16:05:34,428 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 17:06:04] 2026-03-09 16:05:34,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 17:06:04] 2026-03-09 16:05:34,455 | INFO     | did not find any defunct processes belonging to 2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:34,478 | INFO     | did not find any defunct processes belonging to 2667353
[2026-03-09 17:06:04] 2026-03-09 16:05:34,478 | INFO     | ready for new job
[2026-03-09 17:06:04] 2026-03-09 16:05:34,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 17:06:04] 2026-03-09 16:05:34,479 | INFO     | **************************************
[2026-03-09 17:06:04] 2026-03-09 16:05:34,479 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 17:06:04] 2026-03-09 16:05:34,479 | INFO     | **************************************
[2026-03-09 17:06:04] 2026-03-09 16:05:34,479 | INFO     | 
[2026-03-09 17:06:04] 2026-03-09 16:05:34,484 | INFO     | architecture information:
[2026-03-09 17:06:04] 2026-03-09 16:05:34,485 | INFO     | executing command: cat /etc/os-release
[2026-03-09 17:06:04] 2026-03-09 16:05:34,508 | INFO     | cat /etc/os-release:
[2026-03-09 17:06:04] NAME="CentOS Linux"
[2026-03-09 17:06:04] VERSION="7 (Core)"
[2026-03-09 17:06:04] ID="centos"
[2026-03-09 17:06:04] ID_LIKE="rhel fedora"
[2026-03-09 17:06:04] VERSION_ID="7"
[2026-03-09 17:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 17:06:04] ANSI_COLOR="0;31"
[2026-03-09 17:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 17:06:04] HOME_URL="https://www.centos.org/"
[2026-03-09 17:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 17:06:04] 
[2026-03-09 17:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 17:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 17:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 17:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 17:06:04] 
[2026-03-09 17:06:04] 2026-03-09 16:05:34,509 | INFO     | **************************************
[2026-03-09 17:06:04] 2026-03-09 16:05:35,011 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-09 17:06:04] 2026-03-09 16:05:35,025 | INFO     | sufficient remaining disk space (20693647360 B)
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | INFO     | update_server=False
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:06:04] 2026-03-09 16:05:35,026 | INFO     | will abort loop
[2026-03-09 17:06:04] 2026-03-09 16:05:35,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 17:06:04] 2026-03-09 16:05:35,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 17:06:04] 2026-03-09 16:05:35,512 | INFO     | all data control threads have been joined
[2026-03-09 17:06:04] 2026-03-09 16:05:35,634 | INFO     | all payload control threads have been joined
[2026-03-09 17:06:04] 2026-03-09 16:05:35,720 | INFO     | all job control threads have been joined
[2026-03-09 17:06:04] 2026-03-09 16:05:36,031 | INFO     | [job] retrieve thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,031 | INFO     | [job] job monitor thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,173 | INFO     | [data] copytool_in thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,520 | INFO     | [data] control thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,557 | INFO     | [payload] validate_post thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:06:04] 2026-03-09 16:05:36,639 | INFO     | [payload] control thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:36,725 | INFO     | [job] control thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,129 | INFO     | [monitor] cgroup control has ended
[2026-03-09 17:06:04] 2026-03-09 16:05:37,135 | INFO     | [data] copytool_out thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,146 | INFO     | [payload] failed_post thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,180 | INFO     | [job] validate thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,227 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,390 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,397 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:37,567 | INFO     | [job] queue monitor thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:39,488 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:45,726 | INFO     | job.realtimelogging is not enabled
[2026-03-09 17:06:04] 2026-03-09 16:05:46,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 17:06:04] 2026-03-09 16:05:47,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23276157241152)>', '<ExcThread(monitor, started 23275915974400)>']
[2026-03-09 17:06:04] 2026-03-09 16:05:52,419 | INFO     | all workflow threads have been joined
[2026-03-09 17:06:04] 2026-03-09 16:05:52,419 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 17:06:04] 2026-03-09 16:05:52,419 | INFO     | traces error code: 0
[2026-03-09 17:06:04] 2026-03-09 16:05:52,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 17:06:04] 2026-03-09 16:06:03,988 | INFO     | PID=2655616 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 17:06:04] 2026-03-09 16:06:03,988 | INFO     | .. there are 61 such processes running
[2026-03-09 17:06:04] 2026-03-09 16:06:03,989 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 17:06:04] 2026-03-09 16:06:03,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 17:06:04] 2026-03-09 16:06:03,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 17:06:04] 2026-03-09 16:06:03,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 17:06:04] 2026-03-09 16:06:03,989 | INFO     | [monitor] control thread has ended
[2026-03-09 17:06:04] 2026-03-09 16:06:04,145 [wrapper] ==== pilot stdout END ====
[2026-03-09 17:06:04] 2026-03-09 16:06:04,148 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 17:06:04] 2026-03-09 16:06:04,172 [wrapper] pilotpid: 2655616
[2026-03-09 17:06:04] 2026-03-09 16:06:04,175 [wrapper] Pilot exit status: 0
[2026-03-09 17:06:04] 2026-03-09 16:06:04,273 [wrapper] pandaids: 7039135189
[2026-03-09 17:06:04] 2026-03-09 16:06:04,401 [wrapper] cleanup supervisor_pilot 3530184 2655617
[2026-03-09 17:06:04] 2026-03-09 16:06:04,405 [wrapper] Test setup, not cleaning
[2026-03-09 17:06:04] 2026-03-09 16:06:04,418 [wrapper] apfmon messages muted
[2026-03-09 17:06:04] 2026-03-09 16:06:04,440 [wrapper] ==== wrapper stdout END ====
[2026-03-09 17:06:04] 2026-03-09 16:06:04,443 [wrapper] ==== wrapper stderr END ====
[2026-03-09 17:06:04]  *** Error codes and diagnostics ***
[2026-03-09 17:06:04]     "exeErrorCode": 0,
[2026-03-09 17:06:04]     "exeErrorDiag": "",
[2026-03-09 17:06:04]     "pilotErrorCode": 0,
[2026-03-09 17:06:04]     "pilotErrorDiag": "",
[2026-03-09 17:06:04]  *** Listing of results directory ***
[2026-03-09 17:06:04] total 618620
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc    584627 Mar  7 15:47 pilot3.tar.gz
[2026-03-09 17:06:04] -rwx------. 1 boinc boinc     36322 Mar  7 15:51 runpilot2-wrapper.sh
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc      5111 Mar  7 15:52 queuedata.json
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc       100 Mar  9 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 17:06:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 15:42 run_atlas
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc       105 Mar  9 15:42 job.xml
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:42 start_atlas.sh
[2026-03-09 17:06:04] drwxrwx--x. 2 boinc boinc      4096 Mar  9 15:42 shared
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc    597952 Mar  9 15:42 input.tar.gz
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc      6707 Mar  9 15:42 init_data.xml
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc 438823321 Mar  9 15:42 EVNT.46701403._002198.pool.root.1
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc         0 Mar  9 15:42 boinc_lockfile
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc      2568 Mar  9 15:42 pandaJob.out
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc    990760 Mar  9 15:43 agis_schedconf.cvmfs.json
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc   1511578 Mar  9 15:43 agis_ddmendpoints.agis.ALL.json
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc       445 Mar  9 15:43 workernode_map.json
[2026-03-09 17:06:04] drwx------. 5 boinc boinc      4096 Mar  9 15:43 pilot3
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc 188775329 Mar  9 17:05 HITS.48955015._007452.pool.root.1
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc       530 Mar  9 17:05 boinc_task_state.xml
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc      1033 Mar  9 17:05 memory_monitor_summary.json
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc    254498 Mar  9 17:05 log.48955015._007452.job.log.tgz.1
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc      6356 Mar  9 17:05 heartbeat.json
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc      8192 Mar  9 17:05 boinc_mmap_file
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc        27 Mar  9 17:05 wrapper_checkpoint.txt
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc        95 Mar  9 17:06 pilot_heartbeat.json
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc       823 Mar  9 17:06 pilotlog.txt
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc    720834 Mar  9 17:06 log.48955015._007452.job.log.1
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc       357 Mar  9 17:06 output.list
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc       620 Mar  9 17:06 runtime_log
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc    993280 Mar  9 17:06 result.tar.gz
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc      9221 Mar  9 17:06 runtime_log.err
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc       662 Mar  9 17:06 5lVNDmWB8I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbEWLDmuBL8Bo.diag
[2026-03-09 17:06:04] -rw-r--r--. 1 boinc boinc     21457 Mar  9 17:06 stderr.txt
[2026-03-09 17:06:04] HITS file was successfully produced:
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc 188775329 Mar  9 17:05 shared/HITS.pool.root.1
[2026-03-09 17:06:04]  *** Contents of shared directory: ***
[2026-03-09 17:06:04] total 614472
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:42 start_atlas.sh
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc    597952 Mar  9 15:42 input.tar.gz
[2026-03-09 17:06:04] -rw-r--r--. 2 boinc boinc 438823321 Mar  9 15:42 ATLAS.root_0
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc 188775329 Mar  9 17:05 HITS.pool.root.1
[2026-03-09 17:06:04] -rw-------. 1 boinc boinc    993280 Mar  9 17:06 result.tar.gz
17:06:05 (2648612): run_atlas exited; CPU time 18731.611575
17:06:05 (2648612): called boinc_finish(0)

</stderr_txt>
]]>

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