Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:00 (648276): wrapper (7.7.26015): starting
19:50:00 (648276): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 19:50:00] Arguments: --nthreads 4
[2026-03-07 19:50:00] Threads: 4
[2026-03-07 19:50:00] Checking for CVMFS
[2026-03-07 19:50:00] No cvmfs_config command found, will try listing directly
[2026-03-07 19:50:00] CVMFS is ok
[2026-03-07 19:50:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 19:50:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 19:50:00] Further information can be found at the LHC@home message board.
[2026-03-07 19:50:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:50:00] Checking for apptainer binary...
[2026-03-07 19:50:00] which: no apptainer in ((null))
[2026-03-07 19:50:00] apptainer is not installed, using version from CVMFS
[2026-03-07 19:50:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:50:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-07 19:50:00] apptainer works
[2026-03-07 19:50:00] Set ATHENA_PROC_NUMBER=4
[2026-03-07 19:50:00] Set ATHENA_CORE_NUMBER=4
[2026-03-07 19:50:00] Starting ATLAS job with PandaID=7039129040
[2026-03-07 19:50:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 21:07:25]  *** The last 200 lines of the pilot log: ***
[2026-03-07 21:07:26]  filesize=268650
[2026-03-07 21:07:26]  filetype=log
[2026-03-07 21:07:26]  guid=13c46ea8-3729-48d2-8110-05d5cb7dbdbf
[2026-03-07 21:07:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 21:07:26]  is_altstaged=None
[2026-03-07 21:07:26]  is_tar=False
[2026-03-07 21:07:26]  lfn=log.48955006._016820.job.log.tgz.1
[2026-03-07 21:07:26]  mtime=0
[2026-03-07 21:07:26]  protocol_id=None
[2026-03-07 21:07:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 21:07:26]  replicas=None
[2026-03-07 21:07:26]  scope=mc23_13p6TeV
[2026-03-07 21:07:26]  status=None
[2026-03-07 21:07:26]  status_code=0
[2026-03-07 21:07:26]  storage_token=
[2026-03-07 21:07:26]  surl=/var/lib/boinc/var/slot40/slots/5/PanDA_Pilot-7039129040/log.48955006._016820.job.log.tgz.1
[2026-03-07 21:07:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/f9/log.48955006._016820.job.log.tgz.1
[2026-03-07 21:07:26]  workdir=None
[2026-03-07 21:07:26] ]
[2026-03-07 21:07:26] 2026-03-07 20:06:41,093 | INFO     | transferring file log.48955006._016820.job.log.tgz.1 from /var/lib/boinc/var/slot40/slots/5/PanDA_Pilot-7039129040/log.48955006._016820.job.log.tgz.1 to /var/lib/b
[2026-03-07 21:07:26] 2026-03-07 20:06:41,093 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot40/slots/5/PanDA_Pilot-7039129040/log.48955006._016820.job.log.tgz.1 /var/lib/boinc/var/slot40/slots/5/lo
[2026-03-07 21:07:26] 2026-03-07 20:06:41,111 | INFO     | adding to output.list: log.48955006._016820.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/f9/log.48955006._016820.job.log.tg
[2026-03-07 21:07:26] 2026-03-07 20:06:41,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 21:07:26] 2026-03-07 20:06:41,112 | INFO     | summary of transferred files:
[2026-03-07 21:07:26] 2026-03-07 20:06:41,112 | INFO     |  -- lfn=log.48955006._016820.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 21:07:26] 2026-03-07 20:06:41,112 | INFO     | stage-out finished correctly
[2026-03-07 21:07:26] 2026-03-07 20:06:41,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 21:07:26] 2026-03-07 20:06:41,885 | INFO     | time since job start (4589s) is within the limit (349056.0s)
[2026-03-07 21:07:26] 2026-03-07 20:06:41,942 | INFO     | monitor loop #334: job 0:7039129040 is in state 'finished'
[2026-03-07 21:07:26] 2026-03-07 20:06:41,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,321 | INFO     | job 7039129040 has state=finished
[2026-03-07 21:07:26] 2026-03-07 20:06:43,321 | INFO     | preparing for final server update for job 7039129040 in state='finished'
[2026-03-07 21:07:26] 2026-03-07 20:06:43,322 | INFO     | reading metadata from: /var/lib/boinc/var/slot40/slots/5/PanDA_Pilot-7039129040/jobReport.json
[2026-03-07 21:07:26] 2026-03-07 20:06:43,323 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot40/slots/5/workernode_map.json
[2026-03-07 21:07:26] 2026-03-07 20:06:43,323 | INFO     | this job has now completed (state=finished)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,323 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,323 | INFO     | log transfer has been attempted: DONE
[2026-03-07 21:07:26] 2026-03-07 20:06:43,323 | INFO     | job 7039129040 has finished - writing final server update
[2026-03-07 21:07:26] 2026-03-07 20:06:43,324 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1956357/.job.ad'
[2026-03-07 21:07:26] 2026-03-07 20:06:43,324 | INFO     | total number of processed events: 400 (read)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,342 | INFO     | using path: /var/lib/boinc/var/slot40/slots/5/PanDA_Pilot-7039129040/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,342 | INFO     | extracted standard info from prmon json
[2026-03-07 21:07:26] 2026-03-07 20:06:43,342 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 21:07:26] 2026-03-07 20:06:43,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 21:07:26] 2026-03-07 20:06:43,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 21:07:26] 2026-03-07 20:06:43,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | fitting pss+swap vs Time
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | sum of square deviations: 97479037.0
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | sum of deviations: 247958473.00000003
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | mean x: 1772911780.5
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | mean y: 2321727.1470588236
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | intersect: -4507453003.767561
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | chi2: 0.00024515542729219576
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | current memory leak: 2.54 B/s (using 68 data points, chi2=0.00)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | could have reported an average CPU frequency of 3616 MHz (6 samples)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | ..............................
[2026-03-07 21:07:26] 2026-03-07 20:06:43,344 | INFO     | . Timing measurements:
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . get job = 0 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . initial setup = 4 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . payload setup = 4 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . stage-in = 0 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . payload execution = 4568 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . stage-out = 0 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | . log creation = 0 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,345 | INFO     | ..............................
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | 
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | job summary report
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | --------------------------------------------------
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | PanDA job id: 7039129040
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | task id: 48955006
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | errors: (none)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 21:07:26] 2026-03-07 20:06:43,559 | INFO     | pilot state: finished 
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | transexitcode: 0
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | exeerrorcode: 0
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | exeerrordiag: 
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | exitcode: 0
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | exitmsg: OK
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | cpuconsumptiontime: 17559 s
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | nevents: 400
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | neventsw: 0
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | pid: 666020
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | pgrp: 666020
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | corecount: 4
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | event service: False
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | sizes: {0: 2295381, 1: 2295842, 11: 2295842, 4576: 2322041, 4578: 2331117, 4580: 2331255}
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | --------------------------------------------------
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | 
[2026-03-07 21:07:26] 2026-03-07 20:06:43,560 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/5
[2026-03-07 21:07:26] 2026-03-07 20:06:43,577 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,577 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,577 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,577 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | job 7039129040 has completed (purged errors)
[2026-03-07 21:07:26] 2026-03-07 20:06:43,578 | INFO     | overall cleanup function is called
[2026-03-07 21:07:26] 2026-03-07 20:06:44,585 | INFO     | --- collectZombieJob: --- 10, [666020]
[2026-03-07 21:07:26] 2026-03-07 20:06:44,585 | INFO     | zombie collector waiting for pid 666020
[2026-03-07 21:07:26] 2026-03-07 20:06:44,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 21:07:26] 2026-03-07 20:06:44,585 | INFO     | collected zombie processes
[2026-03-07 21:07:26] 2026-03-07 20:06:44,585 | INFO     | will attempt to kill all subprocesses of pid=666020
[2026-03-07 21:07:26] 2026-03-07 20:06:45,111 | INFO     | process IDs to be killed: [666020] (in reverse order)
[2026-03-07 21:07:26] 2026-03-07 20:06:45,325 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 21:07:26] 2026-03-07 20:06:45,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 21:07:26] 2026-03-07 20:06:45,355 | INFO     | did not find any defunct processes belonging to 666020
[2026-03-07 21:07:26] 2026-03-07 20:06:45,382 | INFO     | did not find any defunct processes belonging to 666020
[2026-03-07 21:07:26] 2026-03-07 20:06:45,383 | INFO     | ready for new job
[2026-03-07 21:07:26] 2026-03-07 20:06:45,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 21:07:26] 2026-03-07 20:06:45,384 | INFO     | **************************************
[2026-03-07 21:07:26] 2026-03-07 20:06:45,384 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 21:07:26] 2026-03-07 20:06:45,384 | INFO     | **************************************
[2026-03-07 21:07:26] 2026-03-07 20:06:45,384 | INFO     | 
[2026-03-07 21:07:26] 2026-03-07 20:06:45,390 | INFO     | architecture information:
[2026-03-07 21:07:26] 2026-03-07 20:06:45,391 | INFO     | executing command: cat /etc/os-release
[2026-03-07 21:07:26] 2026-03-07 20:06:45,407 | INFO     | cat /etc/os-release:
[2026-03-07 21:07:26] NAME="CentOS Linux"
[2026-03-07 21:07:26] VERSION="7 (Core)"
[2026-03-07 21:07:26] ID="centos"
[2026-03-07 21:07:26] ID_LIKE="rhel fedora"
[2026-03-07 21:07:26] VERSION_ID="7"
[2026-03-07 21:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 21:07:26] ANSI_COLOR="0;31"
[2026-03-07 21:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 21:07:26] HOME_URL="https://www.centos.org/"
[2026-03-07 21:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 21:07:26] 
[2026-03-07 21:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 21:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 21:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 21:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 21:07:26] 
[2026-03-07 21:07:26] 2026-03-07 20:06:45,407 | INFO     | **************************************
[2026-03-07 21:07:26] 2026-03-07 20:06:45,910 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/5
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | INFO     | sufficient remaining disk space (20024655872 B)
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | INFO     | update_server=False
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:07:26] 2026-03-07 20:06:45,926 | INFO     | aborting loop
[2026-03-07 21:07:26] 2026-03-07 20:06:46,245 | INFO     | all payload control threads have been joined
[2026-03-07 21:07:26] 2026-03-07 20:06:46,447 | INFO     | all data control threads have been joined
[2026-03-07 21:07:26] 2026-03-07 20:06:46,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 21:07:26] 2026-03-07 20:06:46,930 | INFO     | [job] retrieve thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:46,931 | INFO     | [job] job monitor thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,049 | INFO     | [payload] validate_post thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 21:07:26] 2026-03-07 20:06:47,250 | INFO     | [payload] control thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,410 | INFO     | [payload] failed_post thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,447 | INFO     | [job] validate thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,452 | INFO     | [data] control thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,557 | INFO     | all job control threads have been joined
[2026-03-07 21:07:26] 2026-03-07 20:06:47,705 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,706 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:47,988 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:48,094 | INFO     | [data] copytool_in thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:48,109 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:48,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:07:26] 2026-03-07 20:06:48,562 | INFO     | [job] control thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:48,678 | INFO     | [data] copytool_out thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:49,405 | INFO     | [job] queue monitor thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:06:51,224 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 21:07:26] 2026-03-07 20:07:15,432 | INFO     | PID=653153 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 21:07:26] 2026-03-07 20:07:15,433 | INFO     | .. there are 54 such processes running
[2026-03-07 21:07:26] 2026-03-07 20:07:15,433 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 21:07:26] 2026-03-07 20:07:15,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 21:07:26] 2026-03-07 20:07:15,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 21:07:26] 2026-03-07 20:07:19,660 | INFO     | [monitor] cgroup control has ended
[2026-03-07 21:07:26] 2026-03-07 20:07:20,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23418761791296)>', '<ExcThread(monitor, started 23418522314496)>']
[2026-03-07 21:07:26] 2026-03-07 20:07:21,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 21:07:26] 2026-03-07 20:07:21,464 | INFO     | [monitor] control thread has ended
[2026-03-07 21:07:26] 2026-03-07 20:07:25,693 | INFO     | all workflow threads have been joined
[2026-03-07 21:07:26] 2026-03-07 20:07:25,693 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 21:07:26] 2026-03-07 20:07:25,693 | INFO     | traces error code: 0
[2026-03-07 21:07:26] 2026-03-07 20:07:25,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 21:07:26] 2026-03-07 20:07:25,806 [wrapper] ==== pilot stdout END ====
[2026-03-07 21:07:26] 2026-03-07 20:07:25,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 21:07:26] 2026-03-07 20:07:25,811 [wrapper] pilotpid: 653153
[2026-03-07 21:07:26] 2026-03-07 20:07:25,814 [wrapper] Pilot exit status: 0
[2026-03-07 21:07:26] 2026-03-07 20:07:25,823 [wrapper] pandaids: 7039129040
[2026-03-07 21:07:26] 2026-03-07 20:07:25,935 [wrapper] cleanup supervisor_pilot 1353814 653154
[2026-03-07 21:07:26] 2026-03-07 20:07:25,939 [wrapper] Test setup, not cleaning
[2026-03-07 21:07:26] 2026-03-07 20:07:25,942 [wrapper] apfmon messages muted
[2026-03-07 21:07:26] 2026-03-07 20:07:25,945 [wrapper] ==== wrapper stdout END ====
[2026-03-07 21:07:26] 2026-03-07 20:07:25,947 [wrapper] ==== wrapper stderr END ====
[2026-03-07 21:07:26]  *** Error codes and diagnostics ***
[2026-03-07 21:07:26]     "exeErrorCode": 0,
[2026-03-07 21:07:26]     "exeErrorDiag": "",
[2026-03-07 21:07:26]     "pilotErrorCode": 0,
[2026-03-07 21:07:26]     "pilotErrorDiag": "",
[2026-03-07 21:07:26]  *** Listing of results directory ***
[2026-03-07 21:07:26] total 611712
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc    584627 Mar  7 15:47 pilot3.tar.gz
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc      5111 Mar  7 15:50 queuedata.json
[2026-03-07 21:07:26] -rwx------. 1 boinc boinc     36322 Mar  7 15:50 runpilot2-wrapper.sh
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 21:07:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:50 run_atlas
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:50 job.xml
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc 438019884 Mar  7 19:50 EVNT.46701403._000337.pool.root.1
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:50 start_atlas.sh
[2026-03-07 21:07:26] drwxrwx--x. 2 boinc boinc      4096 Mar  7 19:50 shared
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc    597961 Mar  7 19:50 input.tar.gz
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc      6703 Mar  7 19:50 init_data.xml
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:50 boinc_lockfile
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc      2563 Mar  7 19:50 pandaJob.out
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc    999177 Mar  7 19:50 agis_schedconf.cvmfs.json
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc   1521291 Mar  7 19:50 agis_ddmendpoints.agis.ALL.json
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc       443 Mar  7 19:50 workernode_map.json
[2026-03-07 21:07:26] drwx------. 5 boinc boinc      4096 Mar  7 19:50 pilot3
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc 182548179 Mar  7 21:06 HITS.48955006._016820.pool.root.1
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc       530 Mar  7 21:06 boinc_task_state.xml
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc      1027 Mar  7 21:06 memory_monitor_summary.json
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc    268650 Mar  7 21:06 log.48955006._016820.job.log.tgz.1
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc      6360 Mar  7 21:06 heartbeat.json
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc      8192 Mar  7 21:06 boinc_mmap_file
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc        27 Mar  7 21:06 wrapper_checkpoint.txt
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc        95 Mar  7 21:07 pilot_heartbeat.json
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc      4828 Mar  7 21:07 pilotlog.txt
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc    675638 Mar  7 21:07 log.48955006._016820.job.log.1
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc       357 Mar  7 21:07 output.list
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc       620 Mar  7 21:07 runtime_log
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc    962560 Mar  7 21:07 result.tar.gz
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc      9204 Mar  7 21:07 runtime_log.err
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc       662 Mar  7 21:07 qFXKDmjA8I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTsTLDm7aHYcm.diag
[2026-03-07 21:07:26] -rw-r--r--. 1 boinc boinc     21078 Mar  7 21:07 stderr.txt
[2026-03-07 21:07:26] HITS file was successfully produced:
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc 182548179 Mar  7 21:06 shared/HITS.pool.root.1
[2026-03-07 21:07:26]  *** Contents of shared directory: ***
[2026-03-07 21:07:26] total 607576
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc 438019884 Mar  7 19:50 ATLAS.root_0
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:50 start_atlas.sh
[2026-03-07 21:07:26] -rw-r--r--. 2 boinc boinc    597961 Mar  7 19:50 input.tar.gz
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc 182548179 Mar  7 21:06 HITS.pool.root.1
[2026-03-07 21:07:26] -rw-------. 1 boinc boinc    962560 Mar  7 21:07 result.tar.gz
21:07:27 (648276): run_atlas exited; CPU time 17760.708370
21:07:27 (648276): called boinc_finish(0)

</stderr_txt>
]]>

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