Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-07 15:03:37 (19176): vboxwrapper version 26210
2026-03-07 15:03:37 (19176): BOINC client version: 7.20.2
2026-03-07 15:03:43 (19176): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-07 15:03:44 (19176): Successfully copied 'init_data.xml' to the shared directory.
2026-03-07 15:03:44 (19176): Create VM. (boinc_3f87c0cf205df670, slot#0)
2026-03-07 15:03:45 (19176): Setting Memory Size for VM. (4100MB)
2026-03-07 15:03:45 (19176): Setting CPU Count for VM. (1)
2026-03-07 15:03:45 (19176): Setting Chipset Options for VM.
2026-03-07 15:03:45 (19176): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-07 15:03:46 (19176): Setting Boot Options for VM.
2026-03-07 15:03:46 (19176): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-07 15:03:47 (19176): Enabling VM Network Access.
2026-03-07 15:03:47 (19176): Disabling USB Support for VM.
2026-03-07 15:03:47 (19176): Disabling COM Port Support for VM.
2026-03-07 15:03:47 (19176): Disabling LPT Port Support for VM.
2026-03-07 15:03:48 (19176): Disabling Audio Support for VM.
2026-03-07 15:03:48 (19176): Disabling Clipboard Support for VM.
2026-03-07 15:03:48 (19176): Disabling Drag and Drop Support for VM.
2026-03-07 15:03:48 (19176): Adding storage controller(s) to VM.
2026-03-07 15:03:49 (19176): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-07 15:03:51 (19176): Adding VirtualBox Guest Additions to VM.
2026-03-07 15:03:51 (19176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-07 15:03:51 (19176): forwarding host port 56337 to guest port 80
2026-03-07 15:03:52 (19176): Enabling remote desktop for VM.
2026-03-07 15:03:52 (19176): Required extension pack not installed, remote desktop not enabled.
2026-03-07 15:03:52 (19176): Enabling shared directory for VM.
2026-03-07 15:03:53 (19176): Starting VM using VBoxManage interface. (boinc_3f87c0cf205df670, slot#0)
2026-03-07 15:04:02 (19176): Successfully started VM. (PID = '22328')
2026-03-07 15:04:02 (19176): Reporting VM Process ID to BOINC.
2026-03-07 15:04:02 (19176): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-07 15:04:02 (19176): Guest Log: CPUID EDX: 0x178bfbff
2026-03-07 15:04:02 (19176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-07 15:04:02 (19176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-07 15:04:02 (19176): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-07 15:04:02 (19176): Detected: Web Application Enabled (http://localhost:56337)
2026-03-07 15:04:02 (19176): Preference change detected
2026-03-07 15:04:02 (19176): Setting CPU throttle for VM. (100%)
2026-03-07 15:04:02 (19176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 15:04:04 (19176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-07 15:04:04 (19176): Guest Log: BIOS: Booting from Hard Disk...
2026-03-07 15:04:08 (19176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-07 15:04:08 (19176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-07 15:04:08 (19176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-07 15:04:14 (19176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-07 15:04:14 (19176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-07 15:04:26 (19176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000114 main     Log opened 2026-03-07T15:04:24.040883000Z
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000274 main     OS Product: Linux
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000314 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000345 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000376 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000376 main     Process ID: 1247
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.000377 main     Package type: LINUX_64BITS_GENERIC
2026-03-07 15:04:26 (19176): Guest Log: 00:00:00.001959 main     5.2.32 r132073 started. Verbose level = 0
2026-03-07 15:04:26 (19176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-07 15:04:26 (19176): Guest Log: [INFO] Mounting shared directory
2026-03-07 15:04:26 (19176): Guest Log: [INFO] Checking for init_data.xml
2026-03-07 15:04:36 (19176): Guest Log: 00:00:10.010920 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 446 494 000ns (GuestNow=1 772 921 075 497 065 000 ns GuestLast=1 772 895 864 050 571 000 ns fSetTimeLastLoop=true )
2026-03-07 15:04:38 (19176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-07 15:04:38 (19176): Guest Log: [INFO] Detected branch: prod
2026-03-07 15:04:38 (19176): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-07 15:04:38 (19176): Guest Log: Copying input files
2026-03-07 15:04:46 (19176): Guest Log: Copied input files into RunAtlas.
2026-03-07 15:04:46 (19176): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-07 15:04:46 (19176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-07 15:04:46 (19176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-07 15:04:46 (19176): Guest Log: Further information can be found at the LHC@home message board.
2026-03-07 15:05:03 (19176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-07 15:05:03 (19176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-07 15:05:03 (19176): Guest Log: 2.6.3.0 1524 0 32088 157015 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-07 15:05:06 (19176): Guest Log: copied the webapp to /var/www
2026-03-07 15:05:06 (19176): Guest Log: core_number=1
2026-03-07 15:05:06 (19176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-07 15:05:06 (19176): Guest Log:  *** Starting ATLAS job. (PandaID=7039131601 taskID=48955015) ***
2026-03-07 16:44:06 (19176): Status Report: Elapsed Time: '6000.000000'
2026-03-07 16:44:06 (19176): Status Report: CPU Time: '5806.671875'
2026-03-07 18:24:10 (19176): Status Report: Elapsed Time: '12000.000000'
2026-03-07 18:24:10 (19176): Status Report: CPU Time: '11801.656250'
2026-03-07 20:04:13 (19176): Status Report: Elapsed Time: '18000.000000'
2026-03-07 20:04:13 (19176): Status Report: CPU Time: '17795.734375'
2026-03-07 21:44:17 (19176): Status Report: Elapsed Time: '24000.000000'
2026-03-07 21:44:17 (19176): Status Report: CPU Time: '23791.203125'
2026-03-07 23:23:23 (19176): Guest Log:  *** Job finished ***
2026-03-07 23:23:23 (19176): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:09,049 | INFO     | all workflow threads have been joined
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:09,049 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:09,050 | INFO     | traces error code: 0
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:09,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,218 | INFO     | PID=5873 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,219 | INFO     | found 0 job(s) in 20 queues
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,219 | INFO     | [monitor] control thread has ended
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,399 [wrapper] ==== pilot stdout END ====
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,401 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,404 [wrapper] pilotpid: 5873
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:21,406 [wrapper] Pilot exit status: 0
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,051 [wrapper] pandaids: 7039131601
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,067 [wrapper] cleanup supervisor_pilot 32647 5874
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,069 [wrapper] Test setup, not cleaning
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,072 [wrapper] apfmon messages muted
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,075 [wrapper] ==== wrapper stdout END ====
2026-03-07 23:23:23 (19176): Guest Log: 2026-03-08 06:23:22,077 [wrapper] ==== wrapper stderr END ====
2026-03-07 23:23:23 (19176): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 23:23:23 (19176): Guest Log:     "exeErrorCode": 0,
2026-03-07 23:23:23 (19176): Guest Log:     "exeErrorDiag": "",
2026-03-07 23:23:23 (19176): Guest Log:     "pilotErrorCode": 0,
2026-03-07 23:23:23 (19176): Guest Log:     "pilotErrorDiag": "",
2026-03-07 23:23:23 (19176): Guest Log:  *** Listing of results directory ***
2026-03-07 23:23:23 (19176): Guest Log: total 195860
2026-03-07 23:23:23 (19176): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 14:47 pilot3.tar.gz
2026-03-07 23:23:23 (19176): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 14:48 runpilot2-wrapper.sh
2026-03-07 23:23:23 (19176): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 14:48 queuedata.json
2026-03-07 23:23:23 (19176): Guest Log: -rwxr-xr-x. 1 atlas atlas      9175 Mar  7 22:04 init_data.xml
2026-03-07 23:23:23 (19176): Guest Log: -rwxr-xr-x. 1 atlas atlas    597953 Mar  7 22:04 input.tar.gz
2026-03-07 23:23:23 (19176): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 22:04 start_atlas.sh
2026-03-07 23:23:23 (19176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 22:04 EVNT.46701403._002194.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 23:23:23 (19176): Guest Log: -rw-r--r--. 1 atlas atlas      2570 Mar  7 22:05 pandaJob.out
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas    999169 Mar  7 22:06 agis_schedconf.cvmfs.json
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas       427 Mar  7 22:06 workernode_map.json
2026-03-07 23:23:23 (19176): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 22:06 pilot3
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas 187146958 Mar  8 06:22 HITS.48955015._007295.pool.root.1
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  8 06:22 memory_monitor_summary.json
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  8 06:22 agis_ddmendpoints.agis.ALL.json
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas    615544 Mar  8 06:22 log.48955015._007295.job.log.tgz.1
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas      6369 Mar  8 06:22 heartbeat.json
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas        95 Mar  8 06:23 pilot_heartbeat.json
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas       744 Mar  8 06:23 pilotlog.txt
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas   4159211 Mar  8 06:23 log.48955015._007295.job.log.1
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas       357 Mar  8 06:23 output.list
2026-03-07 23:23:23 (19176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  8 06:23 runtime_log
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas   4792320 Mar  8 06:23 result.tar.gz
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas       658 Mar  8 06:23 trYNDmw77I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCAWLDmftyz2n.diag
2026-03-07 23:23:23 (19176): Guest Log: -rw-r--r--. 1 atlas atlas      8634 Mar  8 06:23 runtime_log.err
2026-03-07 23:23:23 (19176): Guest Log: Looking for outputfile HITS.48955015._007295.pool.root.1
2026-03-07 23:23:23 (19176): Guest Log: HITS file was successfully produced
2026-03-07 23:23:23 (19176): Guest Log: -rw-------. 1 atlas atlas 187146958 Mar  8 06:22 /home/atlas/RunAtlas/HITS.48955015._007295.pool.root.1
2026-03-07 23:23:25 (19176): Guest Log: Successfully finished the ATLAS job!
2026-03-07 23:23:25 (19176): Guest Log: Copying the results back to the shared directory!
2026-03-07 23:23:25 (19176): Guest Log:  *** Contents of shared directory: ***
2026-03-07 23:23:25 (19176): Guest Log: total 620516
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root 442837116 Mar  7 22:03 ATLAS.root_0
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root 187146958 Mar  8 06:23 HITS.pool.root.1
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root      9175 Mar  7 22:03 init_data.xml
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root    597953 Mar  7 18:36 input.tar.gz
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root   4792320 Mar  8 06:23 result.tar.gz
2026-03-07 23:23:25 (19176): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  7 18:36 start_atlas.sh
2026-03-07 23:23:25 (19176): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 23:23:25 (19176): VM Completion File Detected.
2026-03-07 23:23:25 (19176): Powering off VM.
2026-03-07 23:23:27 (19176): Successfully stopped VM.
2026-03-07 23:23:27 (19176): Deregistering VM. (boinc_3f87c0cf205df670, slot#0)
2026-03-07 23:23:27 (19176): Removing network bandwidth throttle group from VM.
2026-03-07 23:23:28 (19176): Removing VM from VirtualBox.
2026-03-07 23:23:33 (19176): called boinc_finish(0)

</stderr_txt>
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