Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:03:45 (2706051): wrapper (7.7.26015): starting
04:03:45 (2706051): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 04:03:45] Arguments: --nthreads 4
[2026-03-08 04:03:45] Threads: 4
[2026-03-08 04:03:45] Checking for CVMFS
[2026-03-08 04:03:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 04:03:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 04:03:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 04:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 04:03:45] 2.9.2.0 150552 14969 98504 157023 2 50 32590963 36864001 0 130560 0 6569681 99.984 558348 11867 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 04:03:45] CVMFS is ok
[2026-03-08 04:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 04:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 04:03:45] Further information can be found at the LHC@home message board.
[2026-03-08 04:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 04:03:45] Checking for apptainer binary...
[2026-03-08 04:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 04:03:45] Running /usr/bin/apptainer --version
[2026-03-08 04:03:45] apptainer version 1.4.1-1.1
[2026-03-08 04:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 04:03:45] thA317
[2026-03-08 04:03:45] apptainer works
[2026-03-08 04:03:45] Set ATHENA_PROC_NUMBER=4
[2026-03-08 04:03:45] Set ATHENA_CORE_NUMBER=4
[2026-03-08 04:03:45] Starting ATLAS job with PandaID=7032959108
[2026-03-08 04:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 07:03:16]  *** The last 200 lines of the pilot log: ***
[2026-03-08 07:03:16] 2026-03-08 06:02:16,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 07:03:16] 2026-03-08 06:02:16,486 | INFO     | did not find any defunct processes belonging to 2714673
[2026-03-08 07:03:16] 2026-03-08 06:02:16,488 | INFO     | did not find any defunct processes belonging to 2714673
[2026-03-08 07:03:16] 2026-03-08 06:02:16,488 | INFO     | ready for new job
[2026-03-08 07:03:16] 2026-03-08 06:02:16,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 07:03:16] 2026-03-08 06:02:16,489 | INFO     | **************************************
[2026-03-08 07:03:16] 2026-03-08 06:02:16,489 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 07:03:16] 2026-03-08 06:02:16,489 | INFO     | **************************************
[2026-03-08 07:03:16] 2026-03-08 06:02:16,489 | INFO     | 
[2026-03-08 07:03:16] 2026-03-08 06:02:16,490 | INFO     | architecture information:
[2026-03-08 07:03:16] 2026-03-08 06:02:16,490 | INFO     | executing command: cat /etc/os-release
[2026-03-08 07:03:16] 2026-03-08 06:02:16,504 | INFO     | cat /etc/os-release:
[2026-03-08 07:03:16] NAME="CentOS Linux"
[2026-03-08 07:03:16] VERSION="7 (Core)"
[2026-03-08 07:03:16] ID="centos"
[2026-03-08 07:03:16] ID_LIKE="rhel fedora"
[2026-03-08 07:03:16] VERSION_ID="7"
[2026-03-08 07:03:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 07:03:16] ANSI_COLOR="0;31"
[2026-03-08 07:03:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 07:03:16] HOME_URL="https://www.centos.org/"
[2026-03-08 07:03:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 07:03:16] 
[2026-03-08 07:03:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 07:03:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 07:03:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 07:03:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 07:03:16] 
[2026-03-08 07:03:16] 2026-03-08 06:02:16,504 | INFO     | **************************************
[2026-03-08 07:03:16] 2026-03-08 06:02:17,007 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | INFO     | sufficient remaining disk space (225045381120 B)
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | INFO     | update_server=False
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 07:03:16] 2026-03-08 06:02:17,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 07:03:16] 2026-03-08 06:02:17,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 07:03:16] 2026-03-08 06:02:17,066 | WARNING  | process 2714673 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 07:03:16] 2026-03-08 06:02:17,109 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 07:03:16] 2026-03-08 06:02:17,161 | INFO     | number of running child processes to parent process 2714673: 1
[2026-03-08 07:03:16] 2026-03-08 06:02:17,161 | INFO     | maximum number of monitored processes: 6
[2026-03-08 07:03:16] 2026-03-08 06:02:17,161 | INFO     | aborting job monitoring since job object (job id=7032959108) has expired
[2026-03-08 07:03:16] 2026-03-08 06:02:17,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:03:16] 2026-03-08 06:02:17,161 | INFO     | will abort loop
[2026-03-08 07:03:16] 2026-03-08 06:02:17,280 | INFO     | all data control threads have been joined
[2026-03-08 07:03:16] 2026-03-08 06:02:17,285 | INFO     | all payload control threads have been joined
[2026-03-08 07:03:16] 2026-03-08 06:02:17,590 | INFO     | all job control threads have been joined
[2026-03-08 07:03:16] 2026-03-08 06:02:18,030 | INFO     | [job] retrieve thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,120 | INFO     | [job] validate thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,158 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,167 | INFO     | [job] job monitor thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,169 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,214 | INFO     | [payload] failed_post thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,286 | INFO     | [data] control thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,290 | INFO     | [payload] control thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,295 | INFO     | [data] copytool_in thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,595 | INFO     | [job] control thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:18,750 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:19,030 | INFO     | [data] copytool_out thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:19,087 | INFO     | [payload] validate_post thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:19,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:03:16] 2026-03-08 06:02:20,931 | INFO     | [job] queue monitor thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:21,031 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:27,294 | INFO     | job.realtimelogging is not enabled
[2026-03-08 07:03:16] 2026-03-08 06:02:28,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 07:03:16] 2026-03-08 06:02:47,855 | INFO     | PID=2710163 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 07:03:16] 2026-03-08 06:02:47,855 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 07:03:16] 2026-03-08 06:02:47,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 07:03:16] 2026-03-08 06:02:47,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 07:03:16] 2026-03-08 06:03:10,097 | INFO     | [monitor] cgroup control has ended
[2026-03-08 07:03:16] 2026-03-08 06:03:11,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710917236544)>', '<ExcThread(monitor, started 139710571730688)>']
[2026-03-08 07:03:16] 2026-03-08 06:03:11,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 07:03:16] 2026-03-08 06:03:11,978 | INFO     | [monitor] control thread has ended
[2026-03-08 07:03:16] 2026-03-08 06:03:16,441 | INFO     | all workflow threads have been joined
[2026-03-08 07:03:16] 2026-03-08 06:03:16,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 07:03:16] 2026-03-08 06:03:16,441 | INFO     | traces error code: 0
[2026-03-08 07:03:16] 2026-03-08 06:03:16,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 07:03:16] 2026-03-08 06:03:16,519 [wrapper] ==== pilot stdout END ====
[2026-03-08 07:03:16] 2026-03-08 06:03:16,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 07:03:16] 2026-03-08 06:03:16,527 [wrapper] pilotpid: 2710163
[2026-03-08 07:03:16] 2026-03-08 06:03:16,531 [wrapper] Pilot exit status: 0
[2026-03-08 07:03:16] 2026-03-08 06:03:16,542 [wrapper] pandaids: 7032959108
[2026-03-08 07:03:16] 2026-03-08 06:03:16,568 [wrapper] cleanup supervisor_pilot 2722053 2710164
[2026-03-08 07:03:16] 2026-03-08 06:03:16,572 [wrapper] Test setup, not cleaning
[2026-03-08 07:03:16] 2026-03-08 06:03:16,576 [wrapper] apfmon messages muted
[2026-03-08 07:03:16] 2026-03-08 06:03:16,580 [wrapper] ==== wrapper stdout END ====
[2026-03-08 07:03:16] 2026-03-08 06:03:16,584 [wrapper] ==== wrapper stderr END ====
[2026-03-08 07:03:16]  *** Error codes and diagnostics ***
[2026-03-08 07:03:16]     "exeErrorCode": 0,
[2026-03-08 07:03:16]     "exeErrorDiag": "",
[2026-03-08 07:03:16]     "pilotErrorCode": 0,
[2026-03-08 07:03:16]     "pilotErrorDiag": "",
[2026-03-08 07:03:16]  *** Listing of results directory ***
[2026-03-08 07:03:16] total 601368
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc    584627 Feb 28 11:26 pilot3.tar.gz
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc      5111 Feb 28 11:26 queuedata.json
[2026-03-08 07:03:16] -rwx------ 1 boinc boinc     36322 Feb 28 11:26 runpilot2-wrapper.sh
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc       100 Mar  8 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 07:03:16] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 04:03 run_atlas
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc       105 Mar  8 04:03 job.xml
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc 294945786 Mar  8 04:03 EVNT.48448685._000001.pool.root.1
[2026-03-08 07:03:16] drwxrwx--x 2 boinc boinc      4096 Mar  8 04:03 shared
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc    597965 Mar  8 04:03 input.tar.gz
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc     15845 Mar  8 04:03 start_atlas.sh
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc         0 Mar  8 04:03 boinc_setup_complete
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc      6376 Mar  8 04:03 init_data.xml
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc         0 Mar  8 04:03 boinc_lockfile
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc      2608 Mar  8 04:03 pandaJob.out
[2026-03-08 07:03:16] -rw------- 1 boinc boinc    999177 Mar  8 04:03 agis_schedconf.cvmfs.json
[2026-03-08 07:03:16] -rw------- 1 boinc boinc   1521291 Mar  8 04:03 agis_ddmendpoints.agis.ALL.json
[2026-03-08 07:03:16] -rw------- 1 boinc boinc       427 Mar  8 04:03 workernode_map.json
[2026-03-08 07:03:16] drwx------ 5 boinc boinc      4096 Mar  8 04:03 pilot3
[2026-03-08 07:03:16] -rw------- 1 boinc boinc 313173302 Mar  8 07:01 HITS.48842579._000018.pool.root.1
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc       530 Mar  8 07:01 boinc_task_state.xml
[2026-03-08 07:03:16] -rw------- 1 boinc boinc        95 Mar  8 07:01 pilot_heartbeat.json
[2026-03-08 07:03:16] -rw------- 1 boinc boinc      1021 Mar  8 07:02 memory_monitor_summary.json
[2026-03-08 07:03:16] -rw------- 1 boinc boinc    360234 Mar  8 07:02 log.48842579._000018.job.log.tgz.1
[2026-03-08 07:03:16] -rw------- 1 boinc boinc      6302 Mar  8 07:02 heartbeat.json
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc      8192 Mar  8 07:02 boinc_mmap_file
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc        28 Mar  8 07:02 wrapper_checkpoint.txt
[2026-03-08 07:03:16] -rw------- 1 boinc boinc      5344 Mar  8 07:03 pilotlog.txt
[2026-03-08 07:03:16] -rw------- 1 boinc boinc   1515650 Mar  8 07:03 log.48842579._000018.job.log.1
[2026-03-08 07:03:16] -rw------- 1 boinc boinc       357 Mar  8 07:03 output.list
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc       620 Mar  8 07:03 runtime_log
[2026-03-08 07:03:16] -rw------- 1 boinc boinc   1894400 Mar  8 07:03 result.tar.gz
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc      8897 Mar  8 07:03 runtime_log.err
[2026-03-08 07:03:16] -rw------- 1 boinc boinc       661 Mar  8 07:03 BbsNDmNiWG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBq6KDmM0sLhm.diag
[2026-03-08 07:03:16] -rw-r--r-- 1 boinc boinc     10587 Mar  8 07:03 stderr.txt
[2026-03-08 07:03:16] HITS file was successfully produced:
[2026-03-08 07:03:16] -rw------- 1 boinc boinc 313173302 Mar  8 07:01 shared/HITS.pool.root.1
[2026-03-08 07:03:16]  *** Contents of shared directory: ***
[2026-03-08 07:03:16] total 596332
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc 294945786 Mar  8 04:03 ATLAS.root_0
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc    597965 Mar  8 04:03 input.tar.gz
[2026-03-08 07:03:16] -rw-r--r-- 2 boinc boinc     15845 Mar  8 04:03 start_atlas.sh
[2026-03-08 07:03:16] -rw------- 1 boinc boinc 313173302 Mar  8 07:01 HITS.pool.root.1
[2026-03-08 07:03:16] -rw------- 1 boinc boinc   1894400 Mar  8 07:03 result.tar.gz
07:03:18 (2706051): run_atlas exited; CPU time 41498.343982
07:03:18 (2706051): called boinc_finish(0)

</stderr_txt>
]]>

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