Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:40 (2634192): wrapper (7.7.26015): starting
09:55:40 (2634192): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 09:55:40] Arguments: --nthreads 4
[2026-03-07 09:55:40] Threads: 4
[2026-03-07 09:55:40] Checking for CVMFS
[2026-03-07 09:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 09:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 09:55:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 09:55:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 09:55:40] 2.13.3.0 9162 7242 51504 157003 0 188 3852279 4096000 2704 130560 2 6151885 99.991 250897 76 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 09:55:40] CVMFS is ok
[2026-03-07 09:55:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 09:55:40] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 09:55:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 09:55:40] Further information can be found at the LHC@home message board.
[2026-03-07 09:55:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 09:55:40] Checking for apptainer binary...
[2026-03-07 09:55:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 09:55:40] Running /usr/bin/apptainer --version
[2026-03-07 09:55:40] apptainer version 1.4.5
[2026-03-07 09:55:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 09:55:41] SETI64-Ubuntu
[2026-03-07 09:55:41] apptainer works
[2026-03-07 09:55:41] Set ATHENA_PROC_NUMBER=4
[2026-03-07 09:55:41] Set ATHENA_CORE_NUMBER=4
[2026-03-07 09:55:41] Starting ATLAS job with PandaID=7039076290
[2026-03-07 09:55:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/86 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 12:18:39]  *** The last 200 lines of the pilot log: ***
[2026-03-07 12:18:39] 2026-03-07 17:18:06,640 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 12:18:39] 2026-03-07 17:18:06,643 | INFO     | fitting pss+swap vs Time
[2026-03-07 12:18:39] 2026-03-07 17:18:06,643 | INFO     | sum of square deviations: 850825255.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,644 | INFO     | sum of deviations: 835199190.0000019
[2026-03-07 12:18:39] 2026-03-07 17:18:06,644 | INFO     | mean x: 1772899622.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,644 | INFO     | mean y: 2296684.8857142855
[2026-03-07 12:18:39] 2026-03-07 17:18:06,645 | INFO     | intersect: -1738042262.4617164
[2026-03-07 12:18:39] 2026-03-07 17:18:06,645 | INFO     | chi2: 2.069545499648915
[2026-03-07 12:18:39] 2026-03-07 17:18:06,645 | INFO     | sum of square deviations: 762879420.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,646 | INFO     | sum of deviations: 8590179393.000002
[2026-03-07 12:18:39] 2026-03-07 17:18:06,646 | INFO     | mean x: 1772899470.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,646 | INFO     | mean y: 2309735.7185185184
[2026-03-07 12:18:39] 2026-03-07 17:18:06,646 | INFO     | intersect: -19960903445.539703
[2026-03-07 12:18:39] 2026-03-07 17:18:06,647 | INFO     | chi2: 1.4168295013444516
[2026-03-07 12:18:39] 2026-03-07 17:18:06,647 | INFO     | current chi2=1.4168295013444516 (change=31.539098725550723 %)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,647 | INFO     | sum of square deviations: 681212772.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,648 | INFO     | sum of deviations: 8300042378.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,648 | INFO     | mean x: 1772899317.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,648 | INFO     | mean y: 2309193.684615385
[2026-03-07 12:18:39] 2026-03-07 17:18:06,648 | INFO     | intersect: -21599075956.597084
[2026-03-07 12:18:39] 2026-03-07 17:18:06,649 | INFO     | chi2: 1.4187160689764235
[2026-03-07 12:18:39] 2026-03-07 17:18:06,649 | INFO     | current chi2=1.4187160689764235 (change=-0.13315417488002132 %)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,649 | INFO     | right removable region: 129
[2026-03-07 12:18:39] 2026-03-07 17:18:06,649 | INFO     | sum of square deviations: 762879420.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | sum of deviations: -15624862751.000002
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | mean x: 1772899775.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | mean y: 2324601.0222222223
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | intersect: 36313850288.33698
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | chi2: 0.7189107664302737
[2026-03-07 12:18:39] 2026-03-07 17:18:06,650 | INFO     | current chi2=0.7189107664302737 (change=65.2623841054844 %)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,651 | INFO     | sum of square deviations: 681212772.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,651 | INFO     | sum of deviations: -12126278907.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | mean x: 1772899927.5
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | mean y: 2318053.1615384617
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | intersect: 31561736584.104496
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | chi2: 0.7067656964541623
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | current chi2=0.7067656964541623 (change=1.6893709961275643 %)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | left removable region: 20
[2026-03-07 12:18:39] 2026-03-07 17:18:06,652 | INFO     | sum of square deviations: 401533110.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,653 | INFO     | sum of deviations: 336861215.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,653 | INFO     | mean x: 1772899897.0
[2026-03-07 12:18:39] 2026-03-07 17:18:06,653 | INFO     | mean y: 2321849.5504587158
[2026-03-07 12:18:39] 2026-03-07 17:18:06,653 | INFO     | intersect: -1485030497.001473
[2026-03-07 12:18:39] 2026-03-07 17:18:06,654 | INFO     | chi2: 0.0002547746684697134
[2026-03-07 12:18:39] 2026-03-07 17:18:06,654 | INFO     | current memory leak: 0.84 B/s (using 109 data points, chi2=0.00)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,654 | INFO     | could have reported an average CPU frequency of 2477 MHz (8 samples)
[2026-03-07 12:18:39] 2026-03-07 17:18:06,654 | INFO     | ..............................
[2026-03-07 12:18:39] 2026-03-07 17:18:06,654 | INFO     | . Timing measurements:
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . get job = 0 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . initial setup = 8 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . payload setup = 6 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . stage-in = 0 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . payload execution = 8503 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . stage-out = 0 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | . log creation = 0 s
[2026-03-07 12:18:39] 2026-03-07 17:18:06,655 | INFO     | ..............................
[2026-03-07 12:18:39] 2026-03-07 17:18:07,025 | INFO     | PID=2638423 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,025 | INFO     | .. there are 3 such processes running
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | job summary report
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | --------------------------------------------------
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | PanDA job id: 7039076290
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | task id: 48955010
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | errors: (none)
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,093 | INFO     | pilot state: finished 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | transexitcode: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | exeerrorcode: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | exeerrordiag: 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | exitcode: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | exitmsg: OK
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | cpuconsumptiontime: 33001 s
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | nevents: 400
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | neventsw: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | pid: 2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | pgrp: 2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | corecount: 4
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | event service: False
[2026-03-07 12:18:39] 2026-03-07 17:18:07,094 | INFO     | sizes: {0: 2295334, 1: 2295795, 11: 2295795, 8514: 2323714, 8516: 2332936}
[2026-03-07 12:18:39] 2026-03-07 17:18:07,095 | INFO     | --------------------------------------------------
[2026-03-07 12:18:39] 2026-03-07 17:18:07,095 | INFO     | 
[2026-03-07 12:18:39] 2026-03-07 17:18:07,095 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/86
[2026-03-07 12:18:39] 2026-03-07 17:18:07,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | job 7039076290 has completed (purged errors)
[2026-03-07 12:18:39] 2026-03-07 17:18:07,123 | INFO     | overall cleanup function is called
[2026-03-07 12:18:39] 2026-03-07 17:18:08,132 | INFO     | --- collectZombieJob: --- 10, [2643410]
[2026-03-07 12:18:39] 2026-03-07 17:18:08,132 | INFO     | zombie collector waiting for pid 2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:08,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 12:18:39] 2026-03-07 17:18:08,132 | INFO     | collected zombie processes
[2026-03-07 12:18:39] 2026-03-07 17:18:08,132 | INFO     | will attempt to kill all subprocesses of pid=2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:08,643 | INFO     | process IDs to be killed: [2643410] (in reverse order)
[2026-03-07 12:18:39] 2026-03-07 17:18:08,792 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 12:18:39] 2026-03-07 17:18:08,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 12:18:39] 2026-03-07 17:18:08,807 | INFO     | did not find any defunct processes belonging to 2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:08,821 | INFO     | did not find any defunct processes belonging to 2643410
[2026-03-07 12:18:39] 2026-03-07 17:18:08,821 | INFO     | ready for new job
[2026-03-07 12:18:39] 2026-03-07 17:18:08,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 12:18:39] 2026-03-07 17:18:08,823 | INFO     | **************************************
[2026-03-07 12:18:39] 2026-03-07 17:18:08,824 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 12:18:39] 2026-03-07 17:18:08,824 | INFO     | **************************************
[2026-03-07 12:18:39] 2026-03-07 17:18:08,824 | INFO     | 
[2026-03-07 12:18:39] 2026-03-07 17:18:08,832 | INFO     | architecture information:
[2026-03-07 12:18:39] 2026-03-07 17:18:08,833 | INFO     | executing command: cat /etc/os-release
[2026-03-07 12:18:39] 2026-03-07 17:18:08,849 | INFO     | cat /etc/os-release:
[2026-03-07 12:18:39] NAME="CentOS Linux"
[2026-03-07 12:18:39] VERSION="7 (Core)"
[2026-03-07 12:18:39] ID="centos"
[2026-03-07 12:18:39] ID_LIKE="rhel fedora"
[2026-03-07 12:18:39] VERSION_ID="7"
[2026-03-07 12:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 12:18:39] ANSI_COLOR="0;31"
[2026-03-07 12:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 12:18:39] HOME_URL="https://www.centos.org/"
[2026-03-07 12:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 12:18:39] 
[2026-03-07 12:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 12:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 12:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 12:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 12:18:39] 
[2026-03-07 12:18:39] 2026-03-07 17:18:08,849 | INFO     | **************************************
[2026-03-07 12:18:39] 2026-03-07 17:18:09,352 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/86
[2026-03-07 12:18:39] 2026-03-07 17:18:09,372 | INFO     | sufficient remaining disk space (378631356416 B)
[2026-03-07 12:18:39] 2026-03-07 17:18:09,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 12:18:39] 2026-03-07 17:18:09,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 12:18:39] 2026-03-07 17:18:09,373 | INFO     | update_server=False
[2026-03-07 12:18:39] 2026-03-07 17:18:09,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 12:18:39] 2026-03-07 17:18:09,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 12:18:39] 2026-03-07 17:18:09,657 | INFO     | all data control threads have been joined
[2026-03-07 12:18:39] 2026-03-07 17:18:09,755 | INFO     | all job control threads have been joined
[2026-03-07 12:18:39] 2026-03-07 17:18:09,979 | WARNING  | process 2643410 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 12:18:39] 2026-03-07 17:18:10,342 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/86/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 12:18:39] 2026-03-07 17:18:10,367 | INFO     | all payload control threads have been joined
[2026-03-07 12:18:39] 2026-03-07 17:18:10,379 | INFO     | [job] retrieve thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:10,401 | INFO     | [payload] validate_post thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:10,465 | INFO     | [data] copytool_in thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:10,663 | INFO     | [data] control thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:10,760 | INFO     | [job] control thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:10,840 | INFO     | number of running child processes to parent process 2643410: 1
[2026-03-07 12:18:39] 2026-03-07 17:18:10,840 | INFO     | maximum number of monitored processes: 6
[2026-03-07 12:18:39] 2026-03-07 17:18:10,840 | INFO     | aborting job monitoring since job object (job id=7039076290) has expired
[2026-03-07 12:18:39] 2026-03-07 17:18:10,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:18:39] 2026-03-07 17:18:10,841 | INFO     | will abort loop
[2026-03-07 12:18:39] 2026-03-07 17:18:11,147 | INFO     | [payload] failed_post thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,245 | INFO     | [job] validate thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,373 | INFO     | [payload] control thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,382 | INFO     | [data] copytool_out thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,474 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,502 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,620 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:11,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 12:18:39] 2026-03-07 17:18:11,846 | INFO     | [job] job monitor thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:12,155 | INFO     | [monitor] cgroup control has ended
[2026-03-07 12:18:39] 2026-03-07 17:18:12,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 12:18:39] 2026-03-07 17:18:12,767 | INFO     | [job] queue monitor thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:16,619 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:20,086 | INFO     | job.realtimelogging is not enabled
[2026-03-07 12:18:39] 2026-03-07 17:18:21,092 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 12:18:39] 2026-03-07 17:18:22,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137001965119296)>', '<ExcThread(monitor, started 137001683924736)>']
[2026-03-07 12:18:39] 2026-03-07 17:18:27,141 | INFO     | all workflow threads have been joined
[2026-03-07 12:18:39] 2026-03-07 17:18:27,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 12:18:39] 2026-03-07 17:18:27,141 | INFO     | traces error code: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:27,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 12:18:39] 2026-03-07 17:18:39,581 | INFO     | PID=2638423 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | INFO     | .. there are 3 such processes running
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | CRITICAL | thread 'MainThread' is not alive
[2026-03-07 12:18:39] 2026-03-07 17:18:39,582 | INFO     | [monitor] control thread has ended
[2026-03-07 12:18:39] 2026-03-07 17:18:39,725 [wrapper] ==== pilot stdout END ====
[2026-03-07 12:18:39] 2026-03-07 17:18:39,727 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 12:18:39] 2026-03-07 17:18:39,731 [wrapper] pilotpid: 2638423
[2026-03-07 12:18:39] 2026-03-07 17:18:39,733 [wrapper] Pilot exit status: 0
[2026-03-07 12:18:39] 2026-03-07 17:18:39,745 [wrapper] pandaids: 7039076290
[2026-03-07 12:18:39] 2026-03-07 17:18:39,821 [wrapper] cleanup supervisor_pilot 2685245 2638424
[2026-03-07 12:18:39] 2026-03-07 17:18:39,825 [wrapper] Test setup, not cleaning
[2026-03-07 12:18:39] 2026-03-07 17:18:39,830 [wrapper] apfmon messages muted
[2026-03-07 12:18:39] 2026-03-07 17:18:39,833 [wrapper] ==== wrapper stdout END ====
[2026-03-07 12:18:39] 2026-03-07 17:18:39,836 [wrapper] ==== wrapper stderr END ====
[2026-03-07 12:18:39]  *** Error codes and diagnostics ***
[2026-03-07 12:18:39]     "exeErrorCode": 0,
[2026-03-07 12:18:39]     "exeErrorDiag": "",
[2026-03-07 12:18:39]     "pilotErrorCode": 0,
[2026-03-07 12:18:39]     "pilotErrorDiag": "",
[2026-03-07 12:18:39]  *** Listing of results directory ***
[2026-03-07 12:18:39] total 618452
[2026-03-07 12:18:39] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 05:23 pilot3.tar.gz
[2026-03-07 12:18:39] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 05:23 runpilot2-wrapper.sh
[2026-03-07 12:18:39] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 05:23 queuedata.json
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 12:18:39] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 09:55 run_atlas
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 09:55 job.xml
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd 439498723 Mar  7 09:55 EVNT.46701403._001212.pool.root.1
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 09:55 start_atlas.sh
[2026-03-07 12:18:39] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 09:55 shared
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd    597949 Mar  7 09:55 input.tar.gz
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 09:55 init_data.xml
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 09:55 boinc_setup_complete
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 09:55 boinc_lockfile
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd      2562 Mar  7 09:55 pandaJob.out
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd    999177 Mar  7 09:55 agis_schedconf.cvmfs.json
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 09:55 agis_ddmendpoints.agis.ALL.json
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd       421 Mar  7 09:55 workernode_map.json
[2026-03-07 12:18:39] drwx------ 5 whitlerd whitlerd      4096 Mar  7 09:55 pilot3
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd 186774524 Mar  7 12:17 HITS.48955010._010578.pool.root.1
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 12:17 boinc_task_state.xml
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd      1035 Mar  7 12:18 memory_monitor_summary.json
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd        95 Mar  7 12:18 pilot_heartbeat.json
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd    333368 Mar  7 12:18 log.48955010._010578.job.log.tgz.1
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd      6282 Mar  7 12:18 heartbeat.json
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 12:18 boinc_mmap_file
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 12:18 wrapper_checkpoint.txt
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd       892 Mar  7 12:18 pilotlog.txt
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd   1209554 Mar  7 12:18 log.48955010._010578.job.log.1
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd       357 Mar  7 12:18 output.list
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 12:18 runtime_log
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd   1556480 Mar  7 12:18 result.tar.gz
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd       648 Mar  7 12:18 u6LLDm4z3I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXVVLDmn5tSqm.diag
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 12:18 runtime_log.err
[2026-03-07 12:18:39] -rw-rw-r-- 1 whitlerd whitlerd     21247 Mar  7 12:18 stderr.txt
[2026-03-07 12:18:39] HITS file was successfully produced:
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd 186774524 Mar  7 12:17 shared/HITS.pool.root.1
[2026-03-07 12:18:39]  *** Contents of shared directory: ***
[2026-03-07 12:18:39] total 613728
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd 439498723 Mar  7 09:55 ATLAS.root_0
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 09:55 start_atlas.sh
[2026-03-07 12:18:39] -rw-r--r-- 2 whitlerd whitlerd    597949 Mar  7 09:55 input.tar.gz
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd 186774524 Mar  7 12:17 HITS.pool.root.1
[2026-03-07 12:18:39] -rw------- 1 whitlerd whitlerd   1556480 Mar  7 12:18 result.tar.gz
12:18:41 (2634192): run_atlas exited; CPU time 33434.779760
12:18:41 (2634192): called boinc_finish(0)

</stderr_txt>
]]>

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