Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:51:03 (1677604): wrapper (7.7.26015): starting
23:51:03 (1677604): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 23:51:03] Arguments: --nthreads 4
[2026-03-07 23:51:03] Threads: 4
[2026-03-07 23:51:03] Checking for CVMFS
[2026-03-07 23:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 23:51:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 23:51:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 23:51:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 23:51:04] 2.9.2.0 3013 9621 102596 157016 0 50 23637799 36864000 0 130560 0 4670334 99.986 357109 9648 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-07 23:51:04] CVMFS is ok
[2026-03-07 23:51:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 23:51:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 23:51:04] Further information can be found at the LHC@home message board.
[2026-03-07 23:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 23:51:04] Checking for apptainer binary...
[2026-03-07 23:51:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 23:51:04] Running /usr/bin/apptainer --version
[2026-03-07 23:51:04] apptainer version 1.4.1-1.1
[2026-03-07 23:51:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 23:51:04] cosA131b
[2026-03-07 23:51:04] apptainer works
[2026-03-07 23:51:04] Set ATHENA_PROC_NUMBER=4
[2026-03-07 23:51:04] Set ATHENA_CORE_NUMBER=4
[2026-03-07 23:51:04] Starting ATLAS job with PandaID=7039030448
[2026-03-07 23:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 00:58:42]  *** The last 200 lines of the pilot log: ***
[2026-03-08 00:58:42] 2026-03-07 23:58:10,968 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 00:58:42] 2026-03-07 23:58:10,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 00:58:42] 2026-03-07 23:58:10,970 | INFO     | did not find any defunct processes belonging to 1686239
[2026-03-08 00:58:42] 2026-03-07 23:58:10,971 | INFO     | did not find any defunct processes belonging to 1686239
[2026-03-08 00:58:42] 2026-03-07 23:58:10,971 | INFO     | ready for new job
[2026-03-08 00:58:42] 2026-03-07 23:58:10,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | **************************************
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | **************************************
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | 
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | architecture information:
[2026-03-08 00:58:42] 2026-03-07 23:58:10,972 | INFO     | executing command: cat /etc/os-release
[2026-03-08 00:58:42] 2026-03-07 23:58:10,987 | INFO     | cat /etc/os-release:
[2026-03-08 00:58:42] NAME="CentOS Linux"
[2026-03-08 00:58:42] VERSION="7 (Core)"
[2026-03-08 00:58:42] ID="centos"
[2026-03-08 00:58:42] ID_LIKE="rhel fedora"
[2026-03-08 00:58:42] VERSION_ID="7"
[2026-03-08 00:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 00:58:42] ANSI_COLOR="0;31"
[2026-03-08 00:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 00:58:42] HOME_URL="https://www.centos.org/"
[2026-03-08 00:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 00:58:42] 
[2026-03-08 00:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 00:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 00:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 00:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 00:58:42] 
[2026-03-08 00:58:42] 2026-03-07 23:58:10,987 | INFO     | **************************************
[2026-03-08 00:58:42] 2026-03-07 23:58:11,490 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-08 00:58:42] 2026-03-07 23:58:11,508 | INFO     | sufficient remaining disk space (330466066432 B)
[2026-03-08 00:58:42] 2026-03-07 23:58:11,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 00:58:42] 2026-03-07 23:58:11,509 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 00:58:42] 2026-03-07 23:58:11,509 | INFO     | update_server=False
[2026-03-08 00:58:42] 2026-03-07 23:58:11,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 00:58:42] 2026-03-07 23:58:11,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 00:58:42] 2026-03-07 23:58:11,610 | INFO     | aborting loop
[2026-03-08 00:58:42] 2026-03-07 23:58:11,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 00:58:42] 2026-03-07 23:58:11,716 | INFO     | all data control threads have been joined
[2026-03-08 00:58:42] 2026-03-07 23:58:12,514 | INFO     | [job] retrieve thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,560 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,588 | INFO     | all payload control threads have been joined
[2026-03-08 00:58:42] 2026-03-07 23:58:12,615 | INFO     | [payload] failed_post thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,615 | INFO     | [job] job monitor thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,688 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,722 | INFO     | [data] control thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,739 | INFO     | [data] copytool_in thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:12,900 | INFO     | all job control threads have been joined
[2026-03-08 00:58:42] 2026-03-07 23:58:13,146 | INFO     | [payload] validate_post thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:13,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 00:58:42] 2026-03-07 23:58:13,593 | INFO     | [payload] control thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:13,627 | INFO     | [data] copytool_out thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:13,890 | INFO     | [job] validate thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:13,906 | INFO     | [job] control thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:13,990 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:14,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 00:58:42] 2026-03-07 23:58:15,417 | INFO     | [job] queue monitor thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:17,374 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:21,686 | INFO     | [monitor] cgroup control has ended
[2026-03-08 00:58:42] 2026-03-07 23:58:22,312 | INFO     | job.realtimelogging is not enabled
[2026-03-08 00:58:42] 2026-03-07 23:58:23,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 00:58:42] 2026-03-07 23:58:24,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410368460608)>', '<ExcThread(monitor, started 140409653159680)>']
[2026-03-08 00:58:42] 2026-03-07 23:58:29,567 | INFO     | all workflow threads have been joined
[2026-03-08 00:58:42] 2026-03-07 23:58:29,567 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 00:58:42] 2026-03-07 23:58:29,567 | INFO     | traces error code: 0
[2026-03-08 00:58:42] 2026-03-07 23:58:29,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 00:58:42] 2026-03-07 23:58:42,339 | INFO     | PID=1681717 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 00:58:42] 2026-03-07 23:58:42,340 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 00:58:42] 2026-03-07 23:58:42,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 00:58:42] 2026-03-07 23:58:42,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 00:58:42] 2026-03-07 23:58:42,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 00:58:42] 2026-03-07 23:58:42,340 | INFO     | [monitor] control thread has ended
[2026-03-08 00:58:42] 2026-03-07 23:58:42,415 [wrapper] ==== pilot stdout END ====
[2026-03-08 00:58:42] 2026-03-07 23:58:42,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 00:58:42] 2026-03-07 23:58:42,424 [wrapper] pilotpid: 1681717
[2026-03-08 00:58:42] 2026-03-07 23:58:42,428 [wrapper] Pilot exit status: 0
[2026-03-08 00:58:42] 2026-03-07 23:58:42,441 [wrapper] pandaids: 7039030448
[2026-03-08 00:58:42] 2026-03-07 23:58:42,462 [wrapper] cleanup supervisor_pilot 1691886 1681718
[2026-03-08 00:58:42] 2026-03-07 23:58:42,466 [wrapper] Test setup, not cleaning
[2026-03-08 00:58:42] 2026-03-07 23:58:42,470 [wrapper] apfmon messages muted
[2026-03-08 00:58:42] 2026-03-07 23:58:42,474 [wrapper] ==== wrapper stdout END ====
[2026-03-08 00:58:42] 2026-03-07 23:58:42,478 [wrapper] ==== wrapper stderr END ====
[2026-03-08 00:58:42]  *** Error codes and diagnostics ***
[2026-03-08 00:58:42]     "exeErrorCode": 0,
[2026-03-08 00:58:42]     "exeErrorDiag": "",
[2026-03-08 00:58:42]     "pilotErrorCode": 0,
[2026-03-08 00:58:42]     "pilotErrorDiag": "",
[2026-03-08 00:58:42]  *** Listing of results directory ***
[2026-03-08 00:58:42] total 617020
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc    584627 Mar  7 06:09 pilot3.tar.gz
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc      5111 Mar  7 06:10 queuedata.json
[2026-03-08 00:58:42] -rwx------ 1 boinc boinc     36322 Mar  7 06:10 runpilot2-wrapper.sh
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc       100 Mar  7 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 00:58:42] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 23:51 run_atlas
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc       105 Mar  7 23:51 job.xml
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc 440403294 Mar  7 23:51 EVNT.46701403._001175.pool.root.1
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc    597947 Mar  7 23:51 input.tar.gz
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc     15845 Mar  7 23:51 start_atlas.sh
[2026-03-08 00:58:42] drwxrwx--x 2 boinc boinc      4096 Mar  7 23:51 shared
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc         0 Mar  7 23:51 boinc_setup_complete
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc      6378 Mar  7 23:51 init_data.xml
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc         0 Mar  7 23:51 boinc_lockfile
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc      2561 Mar  7 23:51 pandaJob.out
[2026-03-08 00:58:42] -rw------- 1 boinc boinc    999169 Mar  7 23:51 agis_schedconf.cvmfs.json
[2026-03-08 00:58:42] -rw------- 1 boinc boinc   1521291 Mar  7 23:51 agis_ddmendpoints.agis.ALL.json
[2026-03-08 00:58:42] -rw------- 1 boinc boinc       429 Mar  7 23:51 workernode_map.json
[2026-03-08 00:58:42] drwx------ 5 boinc boinc      4096 Mar  7 23:51 pilot3
[2026-03-08 00:58:42] -rw------- 1 boinc boinc 185740818 Mar  8 00:57 HITS.48955010._008737.pool.root.1
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc       530 Mar  8 00:57 boinc_task_state.xml
[2026-03-08 00:58:42] -rw------- 1 boinc boinc      1018 Mar  8 00:58 memory_monitor_summary.json
[2026-03-08 00:58:42] -rw------- 1 boinc boinc    281073 Mar  8 00:58 log.48955010._008737.job.log.tgz.1
[2026-03-08 00:58:42] -rw------- 1 boinc boinc      6313 Mar  8 00:58 heartbeat.json
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc      8192 Mar  8 00:58 boinc_mmap_file
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc        27 Mar  8 00:58 wrapper_checkpoint.txt
[2026-03-08 00:58:42] -rw------- 1 boinc boinc       747 Mar  8 00:58 pilotlog.txt
[2026-03-08 00:58:42] -rw------- 1 boinc boinc        95 Mar  8 00:58 pilot_heartbeat.json
[2026-03-08 00:58:42] -rw------- 1 boinc boinc    598276 Mar  8 00:58 log.48955010._008737.job.log.1
[2026-03-08 00:58:42] -rw------- 1 boinc boinc       357 Mar  8 00:58 output.list
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc       620 Mar  8 00:58 runtime_log
[2026-03-08 00:58:42] -rw------- 1 boinc boinc    901120 Mar  8 00:58 result.tar.gz
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc      8906 Mar  8 00:58 runtime_log.err
[2026-03-08 00:58:42] -rw------- 1 boinc boinc       659 Mar  8 00:58 PhDLDm46yI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbXSLDm1I8Jjm.diag
[2026-03-08 00:58:42] -rw-r--r-- 1 boinc boinc     10060 Mar  8 00:58 stderr.txt
[2026-03-08 00:58:42] HITS file was successfully produced:
[2026-03-08 00:58:42] -rw------- 1 boinc boinc 185740818 Mar  8 00:57 shared/HITS.pool.root.1
[2026-03-08 00:58:42]  *** Contents of shared directory: ***
[2026-03-08 00:58:42] total 612960
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc 440403294 Mar  7 23:51 ATLAS.root_0
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc    597947 Mar  7 23:51 input.tar.gz
[2026-03-08 00:58:42] -rw-r--r-- 2 boinc boinc     15845 Mar  7 23:51 start_atlas.sh
[2026-03-08 00:58:42] -rw------- 1 boinc boinc 185740818 Mar  8 00:57 HITS.pool.root.1
[2026-03-08 00:58:42] -rw------- 1 boinc boinc    901120 Mar  8 00:58 result.tar.gz
00:58:43 (1677604): run_atlas exited; CPU time 14959.339620
00:58:43 (1677604): called boinc_finish(0)

</stderr_txt>
]]>

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