Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:11 (1480942): wrapper (7.7.26015): starting
04:33:11 (1480942): wrapper: running run_atlas (--nthreads 2)
[2026-03-08 04:33:11] Arguments: --nthreads 2
[2026-03-08 04:33:11] Threads: 2
[2026-03-08 04:33:11] Checking for CVMFS
[2026-03-08 04:33:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 04:33:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 04:33:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 04:33:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 04:33:12] 2.9.2.0 17083 15056 62040 157025 0 49 34491915 36864000 0 130560 0 4293726 99.976 568930 13117 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 04:33:12] CVMFS is ok
[2026-03-08 04:33:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 04:33:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 04:33:12] Further information can be found at the LHC@home message board.
[2026-03-08 04:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 04:33:12] Checking for apptainer binary...
[2026-03-08 04:33:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 04:33:12] Running /usr/bin/apptainer --version
[2026-03-08 04:33:12] apptainer version 1.4.1-1.1
[2026-03-08 04:33:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 04:33:12] magicA244
[2026-03-08 04:33:12] apptainer works
[2026-03-08 04:33:12] Set ATHENA_PROC_NUMBER=2
[2026-03-08 04:33:12] Set ATHENA_CORE_NUMBER=2
[2026-03-08 04:33:12] Starting ATLAS job with PandaID=7039126223
[2026-03-08 04:33:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 06:29:50]  *** The last 200 lines of the pilot log: ***
[2026-03-08 06:29:50] 2026-03-08 05:28:48,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 06:29:50] 2026-03-08 05:28:48,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 06:29:50] 2026-03-08 05:28:48,620 | INFO     | will abort loop
[2026-03-08 06:29:50] 2026-03-08 05:28:48,646 | INFO     | all job control threads have been joined
[2026-03-08 06:29:50] 2026-03-08 05:28:49,115 | INFO     | all data control threads have been joined
[2026-03-08 06:29:50] 2026-03-08 05:28:49,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 06:29:50] 2026-03-08 05:28:49,625 | INFO     | [job] retrieve thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:49,626 | INFO     | [job] job monitor thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:49,627 | INFO     | [job] queue monitor thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:49,651 | INFO     | [job] control thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:49,701 | INFO     | [payload] failed_post thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:49,758 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,008 | INFO     | all payload control threads have been joined
[2026-03-08 06:29:50] 2026-03-08 05:28:50,115 | INFO     | [data] control thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,292 | INFO     | [payload] validate_post thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 06:29:50] 2026-03-08 05:28:50,443 | INFO     | [job] validate thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,752 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,904 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:50,974 | INFO     | [data] copytool_in thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:51,014 | INFO     | [payload] control thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:51,146 | INFO     | [data] copytool_out thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:54,405 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:28:59,035 | INFO     | job.realtimelogging is not enabled
[2026-03-08 06:29:50] 2026-03-08 05:29:00,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 06:29:50] 2026-03-08 05:29:44,288 | INFO     | [monitor] cgroup control has ended
[2026-03-08 06:29:50] 2026-03-08 05:29:44,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063526598464)>', '<ExcThread(monitor, started 140062859695872)>']
[2026-03-08 06:29:50] 2026-03-08 05:29:44,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 06:29:50] 2026-03-08 05:29:44,917 | INFO     | [monitor] control thread has ended
[2026-03-08 06:29:50] 2026-03-08 05:29:49,895 | INFO     | all workflow threads have been joined
[2026-03-08 06:29:50] 2026-03-08 05:29:49,897 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 06:29:50] 2026-03-08 05:29:49,897 | INFO     | traces error code: 0
[2026-03-08 06:29:50] 2026-03-08 05:29:49,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 06:29:50] 2026-03-08 05:29:49,940 [wrapper] ==== pilot stdout END ====
[2026-03-08 06:29:50] 2026-03-08 05:29:49,943 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 06:29:50] 2026-03-08 05:29:49,945 [wrapper] pilotpid: 1484970
[2026-03-08 06:29:50] 2026-03-08 05:29:49,948 [wrapper] Pilot exit status: 0
[2026-03-08 06:29:50] 2026-03-08 05:29:49,954 [wrapper] pandaids: 7039126223
[2026-03-08 06:29:50] 2026-03-08 05:29:49,966 [wrapper] cleanup supervisor_pilot 1494315 1484971
[2026-03-08 06:29:50] 2026-03-08 05:29:49,968 [wrapper] Test setup, not cleaning
[2026-03-08 06:29:50] 2026-03-08 05:29:49,971 [wrapper] apfmon messages muted
[2026-03-08 06:29:50] 2026-03-08 05:29:49,973 [wrapper] ==== wrapper stdout END ====
[2026-03-08 06:29:50] 2026-03-08 05:29:49,975 [wrapper] ==== wrapper stderr END ====
[2026-03-08 06:29:50]  *** Error codes and diagnostics ***
[2026-03-08 06:29:50]     "exeErrorCode": 0,
[2026-03-08 06:29:50]     "exeErrorDiag": "",
[2026-03-08 06:29:50]     "pilotErrorCode": 0,
[2026-03-08 06:29:50]     "pilotErrorDiag": "",
[2026-03-08 06:29:50]  *** Listing of results directory ***
[2026-03-08 06:29:50] total 616988
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc    584627 Mar  7 15:01 pilot3.tar.gz
[2026-03-08 06:29:50] -rwx------ 1 boinc boinc     36322 Mar  7 15:02 runpilot2-wrapper.sh
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      5111 Mar  7 15:03 queuedata.json
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc       100 Mar  8 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 06:29:50] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 04:33 run_atlas
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc       105 Mar  8 04:33 job.xml
[2026-03-08 06:29:50] -rw-r--r-- 2 boinc boinc 438986616 Mar  8 04:33 EVNT.46701403._000329.pool.root.1
[2026-03-08 06:29:50] -rw-r--r-- 2 boinc boinc    597957 Mar  8 04:33 input.tar.gz
[2026-03-08 06:29:50] -rw-r--r-- 2 boinc boinc     15845 Mar  8 04:33 start_atlas.sh
[2026-03-08 06:29:50] drwxrwx--x 2 boinc boinc      4096 Mar  8 04:33 shared
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc         0 Mar  8 04:33 boinc_setup_complete
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      6208 Mar  8 04:33 init_data.xml
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc         0 Mar  8 04:33 boinc_lockfile
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      2564 Mar  8 04:33 pandaJob.out
[2026-03-08 06:29:50] -rw------- 1 boinc boinc    999177 Mar  8 04:33 agis_schedconf.cvmfs.json
[2026-03-08 06:29:50] -rw------- 1 boinc boinc   1521291 Mar  8 04:33 agis_ddmendpoints.agis.ALL.json
[2026-03-08 06:29:50] -rw------- 1 boinc boinc       428 Mar  8 04:33 workernode_map.json
[2026-03-08 06:29:50] drwx------ 5 boinc boinc      4096 Mar  8 04:33 pilot3
[2026-03-08 06:29:50] -rw------- 1 boinc boinc        95 Mar  8 06:28 pilot_heartbeat.json
[2026-03-08 06:29:50] -rw------- 1 boinc boinc 186322265 Mar  8 06:28 HITS.48955006._016434.pool.root.1
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc       530 Mar  8 06:28 boinc_task_state.xml
[2026-03-08 06:29:50] -rw------- 1 boinc boinc      1017 Mar  8 06:28 memory_monitor_summary.json
[2026-03-08 06:29:50] -rw------- 1 boinc boinc    288485 Mar  8 06:28 log.48955006._016434.job.log.tgz.1
[2026-03-08 06:29:50] -rw------- 1 boinc boinc      6314 Mar  8 06:28 heartbeat.json
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc        27 Mar  8 06:29 wrapper_checkpoint.txt
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      8192 Mar  8 06:29 boinc_mmap_file
[2026-03-08 06:29:50] -rw------- 1 boinc boinc      4626 Mar  8 06:29 pilotlog.txt
[2026-03-08 06:29:50] -rw------- 1 boinc boinc    994744 Mar  8 06:29 log.48955006._016434.job.log.1
[2026-03-08 06:29:50] -rw------- 1 boinc boinc       357 Mar  8 06:29 output.list
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc       620 Mar  8 06:29 runtime_log
[2026-03-08 06:29:50] -rw------- 1 boinc boinc   1300480 Mar  8 06:29 result.tar.gz
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      8911 Mar  8 06:29 runtime_log.err
[2026-03-08 06:29:50] -rw------- 1 boinc boinc       660 Mar  8 06:29 SIULDm8P7I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPkTLDmNMPUWo.diag
[2026-03-08 06:29:50] -rw-r--r-- 1 boinc boinc      6726 Mar  8 06:29 stderr.txt
[2026-03-08 06:29:50] HITS file was successfully produced:
[2026-03-08 06:29:50] -rw------- 1 boinc boinc 186322265 Mar  8 06:28 shared/HITS.pool.root.1
[2026-03-08 06:29:50]  *** Contents of shared directory: ***
[2026-03-08 06:29:51] total 612536
[2026-03-08 06:29:51] -rw-r--r-- 2 boinc boinc 438986616 Mar  8 04:33 ATLAS.root_0
[2026-03-08 06:29:51] -rw-r--r-- 2 boinc boinc    597957 Mar  8 04:33 input.tar.gz
[2026-03-08 06:29:51] -rw-r--r-- 2 boinc boinc     15845 Mar  8 04:33 start_atlas.sh
[2026-03-08 06:29:51] -rw------- 1 boinc boinc 186322265 Mar  8 06:28 HITS.pool.root.1
[2026-03-08 06:29:51] -rw------- 1 boinc boinc   1300480 Mar  8 06:29 result.tar.gz
06:29:52 (1480942): run_atlas exited; CPU time 13419.572659
06:29:52 (1480942): called boinc_finish(0)

</stderr_txt>
]]>

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