Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
12:24:50 (2714983): wrapper (7.7.26015): starting
12:24:50 (2714983): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 12:24:50] Arguments: --nthreads 4
[2026-03-07 12:24:50] Threads: 4
[2026-03-07 12:24:50] Checking for CVMFS
[2026-03-07 12:24:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 12:24:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 12:24:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 12:24:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 12:24:51] 2.13.3.0 9162 7392 51116 157009 3 188 3882083 4096001 2660 130560 2 6351428 99.991 257741 78 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 12:24:51] CVMFS is ok
[2026-03-07 12:24:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 12:24:51] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 12:24:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 12:24:51] Further information can be found at the LHC@home message board.
[2026-03-07 12:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 12:24:51] Checking for apptainer binary...
[2026-03-07 12:24:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 12:24:51] Running /usr/bin/apptainer --version
[2026-03-07 12:24:51] apptainer version 1.4.5
[2026-03-07 12:24:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 12:24:52] SETI64-Ubuntu
[2026-03-07 12:24:52] apptainer works
[2026-03-07 12:24:52] Set ATHENA_PROC_NUMBER=4
[2026-03-07 12:24:52] Set ATHENA_CORE_NUMBER=4
[2026-03-07 12:24:52] Starting ATLAS job with PandaID=7039126043
[2026-03-07 12:24:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/84 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 14:46:29]  *** The last 200 lines of the pilot log: ***
[2026-03-07 14:46:29] 2026-03-07 19:45:52,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,891 | INFO     | time since job start (8442s) is within the limit (349056.0s)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,945 | INFO     | job 7039126043 has state=finished
[2026-03-07 14:46:29] 2026-03-07 19:45:52,945 | INFO     | preparing for final server update for job 7039126043 in state='finished'
[2026-03-07 14:46:29] 2026-03-07 19:45:52,946 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/84/PanDA_Pilot-7039126043/jobReport.json
[2026-03-07 14:46:29] 2026-03-07 19:45:52,948 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/84/workernode_map.json
[2026-03-07 14:46:29] 2026-03-07 19:45:52,949 | INFO     | this job has now completed (state=finished)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,949 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,949 | INFO     | log transfer has been attempted: DONE
[2026-03-07 14:46:29] 2026-03-07 19:45:52,949 | INFO     | job 7039126043 has finished - writing final server update
[2026-03-07 14:46:29] 2026-03-07 19:45:52,949 | INFO     | total number of processed events: 400 (read)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,974 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/84/PanDA_Pilot-7039126043/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,975 | INFO     | extracted standard info from prmon json
[2026-03-07 14:46:29] 2026-03-07 19:45:52,975 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 14:46:29] 2026-03-07 19:45:52,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 14:46:29] 2026-03-07 19:45:52,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 14:46:29] 2026-03-07 19:45:52,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 14:46:29] 2026-03-07 19:45:52,978 | INFO     | fitting pss+swap vs Time
[2026-03-07 14:46:29] 2026-03-07 19:45:52,979 | INFO     | sum of square deviations: 814878534.5
[2026-03-07 14:46:29] 2026-03-07 19:45:52,980 | INFO     | sum of deviations: 3603175846.499984
[2026-03-07 14:46:29] 2026-03-07 19:45:52,980 | INFO     | mean x: 1772908510.5
[2026-03-07 14:46:29] 2026-03-07 19:45:52,980 | INFO     | mean y: 2331994.992753623
[2026-03-07 14:46:29] 2026-03-07 19:45:52,980 | INFO     | intersect: -7836997245.662147
[2026-03-07 14:46:29] 2026-03-07 19:45:52,980 | INFO     | chi2: 1.4492376778717737
[2026-03-07 14:46:29] 2026-03-07 19:45:52,981 | INFO     | sum of square deviations: 729472282.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,981 | INFO     | sum of deviations: 3821399838.999997
[2026-03-07 14:46:29] 2026-03-07 19:45:52,981 | INFO     | mean x: 1772908358.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | mean y: 2332385.947368421
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | intersect: -9285192145.139544
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | chi2: 1.4509058431230843
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | current chi2=1.4509058431230843 (change=-0.11510639536782971 %)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | right removable region: 132
[2026-03-07 14:46:29] 2026-03-07 19:45:52,982 | INFO     | sum of square deviations: 729472282.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,983 | INFO     | sum of deviations: -14383785909.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,983 | INFO     | mean x: 1772908663.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,983 | INFO     | mean y: 2363514.992481203
[2026-03-07 14:46:29] 2026-03-07 19:45:52,984 | INFO     | intersect: 34960701582.18641
[2026-03-07 14:46:29] 2026-03-07 19:45:52,984 | INFO     | chi2: 0.03873357446757189
[2026-03-07 14:46:29] 2026-03-07 19:45:52,984 | INFO     | current chi2=0.03873357446757189 (change=97.32731386583512 %)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,984 | INFO     | sum of square deviations: 650252192.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,985 | INFO     | sum of deviations: -14016680894.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,985 | INFO     | mean x: 1772908815.5
[2026-03-07 14:46:29] 2026-03-07 19:45:52,985 | INFO     | mean y: 2362767.421875
[2026-03-07 14:46:29] 2026-03-07 19:45:52,985 | INFO     | intersect: 38218761615.06009
[2026-03-07 14:46:29] 2026-03-07 19:45:52,985 | INFO     | chi2: 0.032156328724716056
[2026-03-07 14:46:29] 2026-03-07 19:45:52,986 | INFO     | current chi2=0.032156328724716056 (change=16.9807352749289 %)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,986 | INFO     | left removable region: 20
[2026-03-07 14:46:29] 2026-03-07 19:45:52,986 | INFO     | sum of square deviations: 435610028.0
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | sum of deviations: -10521389251.000002
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | mean x: 1772908937.5
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | mean y: 2358715.4285714286
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | intersect: 42823836273.36563
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | chi2: 0.029735870567772073
[2026-03-07 14:46:29] 2026-03-07 19:45:52,987 | INFO     | current memory leak: -24.15 B/s (using 112 data points, chi2=0.03)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | could have reported an average CPU frequency of 2482 MHz (8 samples)
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | ..............................
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . Timing measurements:
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . get job = 0 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . initial setup = 8 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . payload setup = 6 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . stage-in = 0 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . payload execution = 8415 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,988 | INFO     | . stage-out = 0 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,989 | INFO     | . log creation = 0 s
[2026-03-07 14:46:29] 2026-03-07 19:45:52,989 | INFO     | ..............................
[2026-03-07 14:46:29] 2026-03-07 19:45:53,084 | INFO     | 
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | job summary report
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | --------------------------------------------------
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | PanDA job id: 7039126043
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | task id: 48955006
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | errors: (none)
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | pilot state: finished 
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | transexitcode: 0
[2026-03-07 14:46:29] 2026-03-07 19:45:53,085 | INFO     | exeerrorcode: 0
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | exeerrordiag: 
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | exitcode: 0
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | exitmsg: OK
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | cpuconsumptiontime: 32540 s
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | nevents: 400
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | neventsw: 0
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | pid: 2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | pgrp: 2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | corecount: 4
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | event service: False
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | sizes: {0: 2295436, 1: 2295840, 11: 2295840, 8426: 2323736, 8428: 2332764, 8431: 2332820, 8432: 2333142}
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | --------------------------------------------------
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | 
[2026-03-07 14:46:29] 2026-03-07 19:45:53,086 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 14:46:29] 2026-03-07 19:45:53,110 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,110 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | job 7039126043 has completed (purged errors)
[2026-03-07 14:46:29] 2026-03-07 19:45:53,112 | INFO     | overall cleanup function is called
[2026-03-07 14:46:29] 2026-03-07 19:45:54,121 | INFO     | --- collectZombieJob: --- 10, [2724207]
[2026-03-07 14:46:29] 2026-03-07 19:45:54,121 | INFO     | zombie collector waiting for pid 2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:54,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 14:46:29] 2026-03-07 19:45:54,121 | INFO     | collected zombie processes
[2026-03-07 14:46:29] 2026-03-07 19:45:54,122 | INFO     | will attempt to kill all subprocesses of pid=2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:54,613 | INFO     | process IDs to be killed: [2724207] (in reverse order)
[2026-03-07 14:46:29] 2026-03-07 19:45:54,763 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 14:46:29] 2026-03-07 19:45:54,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 14:46:29] 2026-03-07 19:45:54,774 | INFO     | did not find any defunct processes belonging to 2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:54,782 | INFO     | did not find any defunct processes belonging to 2724207
[2026-03-07 14:46:29] 2026-03-07 19:45:54,782 | INFO     | ready for new job
[2026-03-07 14:46:29] 2026-03-07 19:45:54,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 14:46:29] 2026-03-07 19:45:54,784 | INFO     | **************************************
[2026-03-07 14:46:29] 2026-03-07 19:45:54,784 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 14:46:29] 2026-03-07 19:45:54,784 | INFO     | **************************************
[2026-03-07 14:46:29] 2026-03-07 19:45:54,784 | INFO     | 
[2026-03-07 14:46:29] 2026-03-07 19:45:54,790 | INFO     | architecture information:
[2026-03-07 14:46:29] 2026-03-07 19:45:54,791 | INFO     | executing command: cat /etc/os-release
[2026-03-07 14:46:29] 2026-03-07 19:45:54,804 | INFO     | cat /etc/os-release:
[2026-03-07 14:46:29] NAME="CentOS Linux"
[2026-03-07 14:46:29] VERSION="7 (Core)"
[2026-03-07 14:46:29] ID="centos"
[2026-03-07 14:46:29] ID_LIKE="rhel fedora"
[2026-03-07 14:46:29] VERSION_ID="7"
[2026-03-07 14:46:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 14:46:29] ANSI_COLOR="0;31"
[2026-03-07 14:46:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 14:46:29] HOME_URL="https://www.centos.org/"
[2026-03-07 14:46:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 14:46:29] 
[2026-03-07 14:46:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 14:46:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 14:46:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 14:46:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 14:46:29] 
[2026-03-07 14:46:29] 2026-03-07 19:45:54,805 | INFO     | **************************************
[2026-03-07 14:46:29] 2026-03-07 19:45:55,308 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 14:46:29] 2026-03-07 19:45:55,329 | INFO     | sufficient remaining disk space (379792130048 B)
[2026-03-07 14:46:29] 2026-03-07 19:45:55,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 14:46:29] 2026-03-07 19:45:55,330 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 14:46:29] 2026-03-07 19:45:55,330 | INFO     | update_server=False
[2026-03-07 14:46:29] 2026-03-07 19:45:55,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 14:46:29] 2026-03-07 19:45:55,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 14:46:29] 2026-03-07 19:45:55,416 | INFO     | all job control threads have been joined
[2026-03-07 14:46:29] 2026-03-07 19:45:55,649 | INFO     | all payload control threads have been joined
[2026-03-07 14:46:29] 2026-03-07 19:45:55,718 | INFO     | all data control threads have been joined
[2026-03-07 14:46:29] 2026-03-07 19:45:55,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:46:29] 2026-03-07 19:45:55,810 | INFO     | aborting loop
[2026-03-07 14:46:29] 2026-03-07 19:45:56,336 | INFO     | [job] retrieve thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,421 | INFO     | [job] control thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,522 | INFO     | [job] validate thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,532 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,654 | INFO     | [payload] control thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,713 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,723 | INFO     | [data] control thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:56,816 | INFO     | [job] job monitor thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:57,034 | INFO     | [data] copytool_in thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:57,146 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:57,212 | INFO     | [payload] failed_post thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:57,337 | INFO     | [data] copytool_out thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:57,861 | INFO     | [payload] validate_post thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:45:58,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 14:46:29] 2026-03-07 19:45:58,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 14:46:29] 2026-03-07 19:45:59,101 | INFO     | [job] queue monitor thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:46:02,027 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 14:46:29] 2026-03-07 19:46:22,954 | INFO     | [monitor] cgroup control has ended
[2026-03-07 14:46:29] 2026-03-07 19:46:23,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126628527896384)>', '<ExcThread(monitor, started 126627908413184)>']
[2026-03-07 14:46:29] 2026-03-07 19:46:26,460 | INFO     | PID=2719212 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | INFO     | .. there are 3 such processes running
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 14:46:29] 2026-03-07 19:46:26,461 | INFO     | [monitor] control thread has ended
[2026-03-07 14:46:29] 2026-03-07 19:46:28,814 | INFO     | all workflow threads have been joined
[2026-03-07 14:46:29] 2026-03-07 19:46:28,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 14:46:29] 2026-03-07 19:46:28,814 | INFO     | traces error code: 0
[2026-03-07 14:46:29] 2026-03-07 19:46:28,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 14:46:29] 2026-03-07 19:46:28,938 [wrapper] ==== pilot stdout END ====
[2026-03-07 14:46:29] 2026-03-07 19:46:28,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 14:46:29] 2026-03-07 19:46:28,945 [wrapper] pilotpid: 2719212
[2026-03-07 14:46:29] 2026-03-07 19:46:28,948 [wrapper] Pilot exit status: 0
[2026-03-07 14:46:29] 2026-03-07 19:46:28,960 [wrapper] pandaids: 7039126043
[2026-03-07 14:46:29] 2026-03-07 19:46:29,055 [wrapper] cleanup supervisor_pilot 2751313 2719213
[2026-03-07 14:46:29] 2026-03-07 19:46:29,058 [wrapper] Test setup, not cleaning
[2026-03-07 14:46:29] 2026-03-07 19:46:29,062 [wrapper] apfmon messages muted
[2026-03-07 14:46:29] 2026-03-07 19:46:29,067 [wrapper] ==== wrapper stdout END ====
[2026-03-07 14:46:29] 2026-03-07 19:46:29,069 [wrapper] ==== wrapper stderr END ====
[2026-03-07 14:46:29]  *** Error codes and diagnostics ***
[2026-03-07 14:46:29]     "exeErrorCode": 0,
[2026-03-07 14:46:29]     "exeErrorDiag": "",
[2026-03-07 14:46:29]     "pilotErrorCode": 0,
[2026-03-07 14:46:29]     "pilotErrorDiag": "",
[2026-03-07 14:46:29]  *** Listing of results directory ***
[2026-03-07 14:46:29] total 617608
[2026-03-07 14:46:29] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 08:06 pilot3.tar.gz
[2026-03-07 14:46:29] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 08:07 runpilot2-wrapper.sh
[2026-03-07 14:46:29] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 08:08 queuedata.json
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 14:46:29] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 12:24 run_atlas
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 12:24 job.xml
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd 442541855 Mar  7 12:24 EVNT.46701403._000326.pool.root.1
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 12:24 start_atlas.sh
[2026-03-07 14:46:29] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 12:24 shared
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd    597938 Mar  7 12:24 input.tar.gz
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 12:24 init_data.xml
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 12:24 boinc_setup_complete
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 12:24 boinc_lockfile
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd      2560 Mar  7 12:24 pandaJob.out
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd    999177 Mar  7 12:25 agis_schedconf.cvmfs.json
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 12:25 agis_ddmendpoints.agis.ALL.json
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd       424 Mar  7 12:25 workernode_map.json
[2026-03-07 14:46:29] drwx------ 5 whitlerd whitlerd      4096 Mar  7 12:25 pilot3
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd 182944565 Mar  7 14:45 HITS.48955006._016254.pool.root.1
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 14:45 boinc_task_state.xml
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd      1019 Mar  7 14:45 memory_monitor_summary.json
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd    304783 Mar  7 14:45 log.48955006._016254.job.log.tgz.1
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd      6285 Mar  7 14:45 heartbeat.json
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 14:46 wrapper_checkpoint.txt
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 14:46 boinc_mmap_file
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd        95 Mar  7 14:46 pilot_heartbeat.json
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd      4835 Mar  7 14:46 pilotlog.txt
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd   1196411 Mar  7 14:46 log.48955006._016254.job.log.1
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd       357 Mar  7 14:46 output.list
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 14:46 runtime_log
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd   1515520 Mar  7 14:46 result.tar.gz
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd       648 Mar  7 14:46 qJqLDmlY6I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDwVLDm5Xn9tn.diag
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 14:46 runtime_log.err
[2026-03-07 14:46:29] -rw-rw-r-- 1 whitlerd whitlerd     21411 Mar  7 14:46 stderr.txt
[2026-03-07 14:46:29] HITS file was successfully produced:
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd 182944565 Mar  7 14:45 shared/HITS.pool.root.1
[2026-03-07 14:46:29]  *** Contents of shared directory: ***
[2026-03-07 14:46:29] total 612920
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd 442541855 Mar  7 12:24 ATLAS.root_0
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 12:24 start_atlas.sh
[2026-03-07 14:46:29] -rw-r--r-- 2 whitlerd whitlerd    597938 Mar  7 12:24 input.tar.gz
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd 182944565 Mar  7 14:45 HITS.pool.root.1
[2026-03-07 14:46:29] -rw------- 1 whitlerd whitlerd   1515520 Mar  7 14:46 result.tar.gz
14:46:30 (2714983): run_atlas exited; CPU time 32970.789818
14:46:30 (2714983): called boinc_finish(0)

</stderr_txt>
]]>

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