Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:24:35 (15751): wrapper (7.7.26015): starting
08:24:35 (15751): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 08:24:35] Arguments: --nthreads 12
[2026-03-07 08:24:35] Threads: 12
[2026-03-07 08:24:35] Checking for CVMFS
[2026-03-07 08:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 08:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 08:24:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 08:24:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 08:24:35] 2.11.2.0 723 263125 99632 157002 3 49 12509856 20275201 1 130560 0 107875793 99.922 14316704 34754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 08:24:35] CVMFS is ok
[2026-03-07 08:24:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 08:24:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 08:24:35] Further information can be found at the LHC@home message board.
[2026-03-07 08:24:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 08:24:35] Checking for apptainer binary...
[2026-03-07 08:24:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 08:24:35] Running /usr/bin/apptainer --version
[2026-03-07 08:24:35] apptainer version 1.3.2-1.el7
[2026-03-07 08:24:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 08:24:36] c-205-1.aglt2.org
[2026-03-07 08:24:36] apptainer works
[2026-03-07 08:24:36] Set ATHENA_PROC_NUMBER=12
[2026-03-07 08:24:36] Set ATHENA_CORE_NUMBER=12
[2026-03-07 08:24:37] Starting ATLAS job with PandaID=7039032688
[2026-03-07 08:24:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 09:37:09]  *** The last 200 lines of the pilot log: ***
[2026-03-07 09:37:09]  filetype=log
[2026-03-07 09:37:09]  guid=d19e4860-c7de-4510-a45c-eb205e6274cf
[2026-03-07 09:37:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 09:37:09]  is_altstaged=None
[2026-03-07 09:37:09]  is_tar=False
[2026-03-07 09:37:09]  lfn=log.48955010._009604.job.log.tgz.1
[2026-03-07 09:37:09]  mtime=0
[2026-03-07 09:37:09]  protocol_id=None
[2026-03-07 09:37:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 09:37:09]  replicas=None
[2026-03-07 09:37:09]  scope=mc23_13p6TeV
[2026-03-07 09:37:09]  status=None
[2026-03-07 09:37:09]  status_code=0
[2026-03-07 09:37:09]  storage_token=
[2026-03-07 09:37:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7039032688/log.48955010._009604.job.log.tgz.1
[2026-03-07 09:37:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/46/log.48955010._009604.job.log.tgz.1
[2026-03-07 09:37:09]  workdir=None
[2026-03-07 09:37:09] ]
[2026-03-07 09:37:09] 2026-03-07 14:36:32,536 | INFO     | transferring file log.48955010._009604.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7039032688/log.48955010._009604.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-07 09:37:09] 2026-03-07 14:36:32,536 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7039032688/log.48955010._009604.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._009604.job
[2026-03-07 09:37:09] 2026-03-07 14:36:32,559 | INFO     | adding to output.list: log.48955010._009604.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/46/log.48955010._009604.job.log.tg
[2026-03-07 09:37:09] 2026-03-07 14:36:32,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 09:37:09] 2026-03-07 14:36:32,561 | INFO     | summary of transferred files:
[2026-03-07 09:37:09] 2026-03-07 14:36:32,561 | INFO     |  -- lfn=log.48955010._009604.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 09:37:09] 2026-03-07 14:36:32,561 | INFO     | stage-out finished correctly
[2026-03-07 09:37:09] 2026-03-07 14:36:32,644 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 09:37:09] 2026-03-07 14:36:33,510 | WARNING  | process 24025 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 09:37:09] 2026-03-07 14:36:33,510 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7039032688/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 09:37:09] 2026-03-07 14:36:33,597 | INFO     | number of running child processes to parent process 24025: 1
[2026-03-07 09:37:09] 2026-03-07 14:36:33,597 | INFO     | maximum number of monitored processes: 6
[2026-03-07 09:37:09] 2026-03-07 14:36:33,931 | INFO     | time since job start (4297s) is within the limit (349056.0s)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,057 | INFO     | job 7039032688 has state=finished
[2026-03-07 09:37:09] 2026-03-07 14:36:35,057 | INFO     | preparing for final server update for job 7039032688 in state='finished'
[2026-03-07 09:37:09] 2026-03-07 14:36:35,057 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7039032688/jobReport.json
[2026-03-07 09:37:09] 2026-03-07 14:36:35,060 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-07 09:37:09] 2026-03-07 14:36:35,060 | INFO     | this job has now completed (state=finished)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,061 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,061 | INFO     | log transfer has been attempted: DONE
[2026-03-07 09:37:09] 2026-03-07 14:36:35,061 | INFO     | job 7039032688 has finished - writing final server update
[2026-03-07 09:37:09] 2026-03-07 14:36:35,061 | INFO     | total number of processed events: 400 (read)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,064 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7039032688/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,065 | INFO     | extracted standard info from prmon json
[2026-03-07 09:37:09] 2026-03-07 14:36:35,065 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 09:37:09] 2026-03-07 14:36:35,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 09:37:09] 2026-03-07 14:36:35,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 09:37:09] 2026-03-07 14:36:35,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 09:37:09] 2026-03-07 14:36:35,067 | INFO     | fitting pss+swap vs Time
[2026-03-07 09:37:09] 2026-03-07 14:36:35,067 | INFO     | sum of square deviations: 77515872.0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | sum of deviations: -5158415224.0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | mean x: 1772892117.0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | mean y: 2868097.984126984
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | intersect: 117982753389.63626
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | chi2: 0.1020025405291614
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | current memory leak: -66.55 B/s (using 63 data points, chi2=0.10)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,068 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | ..............................
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . Timing measurements:
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . get job = 0 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . initial setup = 7 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . payload setup = 7 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . stage-in = 0 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . payload execution = 4272 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . stage-out = 0 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,069 | INFO     | . log creation = 0 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,070 | INFO     | ..............................
[2026-03-07 09:37:09] 2026-03-07 14:36:35,147 | INFO     | 
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | job summary report
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | --------------------------------------------------
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | PanDA job id: 7039032688
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | task id: 48955010
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | errors: (none)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 09:37:09] 2026-03-07 14:36:35,148 | INFO     | pilot state: finished 
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | transexitcode: 0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | exeerrorcode: 0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | exeerrordiag: 
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | exitcode: 0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | exitmsg: OK
[2026-03-07 09:37:09] 2026-03-07 14:36:35,149 | INFO     | cpuconsumptiontime: 45220 s
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | nevents: 400
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | neventsw: 0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | pid: 24025
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | pgrp: 24025
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | corecount: 12
[2026-03-07 09:37:09] 2026-03-07 14:36:35,150 | INFO     | event service: False
[2026-03-07 09:37:09] 2026-03-07 14:36:35,151 | INFO     | sizes: {0: 2295313, 1: 2295774, 11: 2295774, 4283: 2321835, 4285: 2330889, 4287: 2331027}
[2026-03-07 09:37:09] 2026-03-07 14:36:35,151 | INFO     | --------------------------------------------------
[2026-03-07 09:37:09] 2026-03-07 14:36:35,151 | INFO     | 
[2026-03-07 09:37:09] 2026-03-07 14:36:35,151 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-07 09:37:09] 2026-03-07 14:36:35,177 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,177 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,177 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,177 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,180 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,180 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 09:37:09] 2026-03-07 14:36:35,180 | INFO     | job 7039032688 has completed (purged errors)
[2026-03-07 09:37:09] 2026-03-07 14:36:35,181 | INFO     | overall cleanup function is called
[2026-03-07 09:37:09] 2026-03-07 14:36:36,189 | INFO     | --- collectZombieJob: --- 10, [24025]
[2026-03-07 09:37:09] 2026-03-07 14:36:36,189 | INFO     | zombie collector waiting for pid 24025
[2026-03-07 09:37:09] 2026-03-07 14:36:36,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 09:37:09] 2026-03-07 14:36:36,199 | INFO     | collected zombie processes
[2026-03-07 09:37:09] 2026-03-07 14:36:36,199 | INFO     | will attempt to kill all subprocesses of pid=24025
[2026-03-07 09:37:09] 2026-03-07 14:36:36,287 | INFO     | process IDs to be killed: [24025] (in reverse order)
[2026-03-07 09:37:09] 2026-03-07 14:36:36,340 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 09:37:09] 2026-03-07 14:36:36,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 09:37:09] 2026-03-07 14:36:36,344 | INFO     | did not find any defunct processes belonging to 24025
[2026-03-07 09:37:09] 2026-03-07 14:36:36,347 | INFO     | did not find any defunct processes belonging to 24025
[2026-03-07 09:37:09] 2026-03-07 14:36:36,347 | INFO     | ready for new job
[2026-03-07 09:37:09] 2026-03-07 14:36:36,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 09:37:09] 2026-03-07 14:36:36,349 | INFO     | **************************************
[2026-03-07 09:37:09] 2026-03-07 14:36:36,349 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 09:37:09] 2026-03-07 14:36:36,349 | INFO     | **************************************
[2026-03-07 09:37:09] 2026-03-07 14:36:36,349 | INFO     | 
[2026-03-07 09:37:09] 2026-03-07 14:36:36,349 | INFO     | architecture information:
[2026-03-07 09:37:09] 2026-03-07 14:36:36,350 | INFO     | executing command: cat /etc/os-release
[2026-03-07 09:37:09] 2026-03-07 14:36:36,365 | INFO     | cat /etc/os-release:
[2026-03-07 09:37:09] NAME="CentOS Linux"
[2026-03-07 09:37:09] VERSION="7 (Core)"
[2026-03-07 09:37:09] ID="centos"
[2026-03-07 09:37:09] ID_LIKE="rhel fedora"
[2026-03-07 09:37:09] VERSION_ID="7"
[2026-03-07 09:37:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 09:37:09] ANSI_COLOR="0;31"
[2026-03-07 09:37:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 09:37:09] HOME_URL="https://www.centos.org/"
[2026-03-07 09:37:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 09:37:09] 
[2026-03-07 09:37:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 09:37:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 09:37:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 09:37:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 09:37:09] 
[2026-03-07 09:37:09] 2026-03-07 14:36:36,365 | INFO     | **************************************
[2026-03-07 09:37:09] 2026-03-07 14:36:36,868 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-07 09:37:09] 2026-03-07 14:36:36,885 | INFO     | sufficient remaining disk space (29026680832 B)
[2026-03-07 09:37:09] 2026-03-07 14:36:36,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 09:37:09] 2026-03-07 14:36:36,886 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 09:37:09] 2026-03-07 14:36:36,886 | INFO     | update_server=False
[2026-03-07 09:37:09] 2026-03-07 14:36:36,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 09:37:09] 2026-03-07 14:36:36,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 09:37:09] 2026-03-07 14:36:37,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 09:37:09] 2026-03-07 14:36:37,106 | INFO     | aborting loop
[2026-03-07 09:37:09] 2026-03-07 14:36:37,222 | INFO     | all job control threads have been joined
[2026-03-07 09:37:09] 2026-03-07 14:36:37,320 | INFO     | all payload control threads have been joined
[2026-03-07 09:37:09] 2026-03-07 14:36:37,890 | INFO     | [job] queue monitor thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:37,891 | INFO     | [job] retrieve thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:37,919 | INFO     | all data control threads have been joined
[2026-03-07 09:37:09] 2026-03-07 14:36:38,086 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,111 | INFO     | [job] job monitor thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 09:37:09] 2026-03-07 14:36:38,227 | INFO     | [job] control thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,235 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,289 | INFO     | [job] validate thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,290 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,326 | INFO     | [payload] control thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,566 | INFO     | [payload] validate_post thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 09:37:09] 2026-03-07 14:36:38,778 | INFO     | [data] copytool_in thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,787 | INFO     | [payload] failed_post thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:38,924 | INFO     | [data] control thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:40,158 | INFO     | [data] copytool_out thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:42,733 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:36:47,896 | INFO     | job.realtimelogging is not enabled
[2026-03-07 09:37:09] 2026-03-07 14:36:48,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 09:37:09] 2026-03-07 14:37:03,100 | INFO     | [monitor] cgroup control has ended
[2026-03-07 09:37:09] 2026-03-07 14:37:03,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553592244032)>', '<ExcThread(monitor, started 140552267888384)>']
[2026-03-07 09:37:09] 2026-03-07 14:37:07,137 | INFO     | PID=19501 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 09:37:09] 2026-03-07 14:37:07,138 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 09:37:09] 2026-03-07 14:37:07,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 09:37:09] 2026-03-07 14:37:07,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 09:37:09] 2026-03-07 14:37:07,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 09:37:09] 2026-03-07 14:37:07,138 | INFO     | [monitor] control thread has ended
[2026-03-07 09:37:09] 2026-03-07 14:37:08,894 | INFO     | all workflow threads have been joined
[2026-03-07 09:37:09] 2026-03-07 14:37:08,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 09:37:09] 2026-03-07 14:37:08,895 | INFO     | traces error code: 0
[2026-03-07 09:37:09] 2026-03-07 14:37:08,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 09:37:09] 2026-03-07 14:37:08,991 [wrapper] ==== pilot stdout END ====
[2026-03-07 09:37:09] 2026-03-07 14:37:08,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 09:37:09] 2026-03-07 14:37:08,999 [wrapper] pilotpid: 19501
[2026-03-07 09:37:09] 2026-03-07 14:37:09,003 [wrapper] Pilot exit status: 0
[2026-03-07 09:37:09] 2026-03-07 14:37:09,018 [wrapper] pandaids: 7039032688
[2026-03-07 09:37:09] 2026-03-07 14:37:09,061 [wrapper] cleanup supervisor_pilot 18489 19502
[2026-03-07 09:37:09] 2026-03-07 14:37:09,065 [wrapper] Test setup, not cleaning
[2026-03-07 09:37:09] 2026-03-07 14:37:09,069 [wrapper] apfmon messages muted
[2026-03-07 09:37:09] 2026-03-07 14:37:09,073 [wrapper] ==== wrapper stdout END ====
[2026-03-07 09:37:09] 2026-03-07 14:37:09,077 [wrapper] ==== wrapper stderr END ====
[2026-03-07 09:37:09]  *** Error codes and diagnostics ***
[2026-03-07 09:37:09]     "exeErrorCode": 0,
[2026-03-07 09:37:09]     "exeErrorDiag": "",
[2026-03-07 09:37:09]     "pilotErrorCode": 0,
[2026-03-07 09:37:09]     "pilotErrorDiag": "",
[2026-03-07 09:37:09]  *** Listing of results directory ***
[2026-03-07 09:37:09] total 619256
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas    584627 Mar  7 01:32 pilot3.tar.gz
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas      5111 Mar  7 02:03 queuedata.json
[2026-03-07 09:37:09] -rwx------ 1 boincer umatlas     36322 Mar  7 02:03 runpilot2-wrapper.sh
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas       100 Mar  7 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 09:37:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar  7 08:24 run_atlas
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas       105 Mar  7 08:24 job.xml
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas 436990156 Mar  7 08:24 EVNT.46701403._001193.pool.root.1
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 08:24 start_atlas.sh
[2026-03-07 09:37:09] drwxrwx--x 2 boincer umatlas      4096 Mar  7 08:24 shared
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas    597945 Mar  7 08:24 input.tar.gz
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas         0 Mar  7 08:24 boinc_lockfile
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas      2559 Mar  7 08:24 pandaJob.out
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas        57 Mar  7 08:24 setup.sh.local
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas    999177 Mar  7 08:24 agis_schedconf.cvmfs.json
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas   1521291 Mar  7 08:24 agis_ddmendpoints.agis.ALL.json
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas       444 Mar  7 08:24 workernode_map.json
[2026-03-07 09:37:09] drwx------ 5 boincer umatlas      4096 Mar  7 08:24 pilot3
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas      5952 Mar  7 09:30 init_data.xml
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas 191191888 Mar  7 09:36 HITS.48955010._009604.pool.root.1
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas      1044 Mar  7 09:36 memory_monitor_summary.json
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas       530 Mar  7 09:36 boinc_task_state.xml
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas    366471 Mar  7 09:36 log.48955010._009604.job.log.tgz.1
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas      6418 Mar  7 09:36 heartbeat.json
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas      8192 Mar  7 09:37 boinc_mmap_file
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas        27 Mar  7 09:37 wrapper_checkpoint.txt
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas        95 Mar  7 09:37 pilot_heartbeat.json
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas      4814 Mar  7 09:37 pilotlog.txt
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas    628523 Mar  7 09:37 log.48955010._009604.job.log.1
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas       357 Mar  7 09:37 output.list
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas       620 Mar  7 09:37 runtime_log
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas   1013760 Mar  7 09:37 result.tar.gz
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas      9338 Mar  7 09:37 runtime_log.err
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas       658 Mar  7 09:37 HSBNDmms0I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmK3ULDmyF2nHo.diag
[2026-03-07 09:37:09] -rw-r--r-- 1 boincer umatlas     21275 Mar  7 09:37 stderr.txt
[2026-03-07 09:37:09] HITS file was successfully produced:
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas 191191888 Mar  7 09:36 shared/HITS.pool.root.1
[2026-03-07 09:37:09]  *** Contents of shared directory: ***
[2026-03-07 09:37:09] total 615064
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas 436990156 Mar  7 08:24 ATLAS.root_0
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 08:24 start_atlas.sh
[2026-03-07 09:37:09] -rw-r--r-- 2 boincer umatlas    597945 Mar  7 08:24 input.tar.gz
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas 191191888 Mar  7 09:36 HITS.pool.root.1
[2026-03-07 09:37:09] -rw------- 1 boincer umatlas   1013760 Mar  7 09:37 result.tar.gz
09:37:10 (15751): run_atlas exited; CPU time 45191.983605
09:37:10 (15751): called boinc_finish(0)

</stderr_txt>
]]>

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