Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:09 (645806): wrapper (7.7.26015): starting
01:48:09 (645806): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 01:48:09] Arguments: --nthreads 4
[2026-03-10 01:48:09] Threads: 4
[2026-03-10 01:48:09] Checking for CVMFS
[2026-03-10 01:48:09] No cvmfs_config command found, will try listing directly
[2026-03-10 01:48:09] CVMFS is ok
[2026-03-10 01:48:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 01:48:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 01:48:09] Further information can be found at the LHC@home message board.
[2026-03-10 01:48:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 01:48:09] Checking for apptainer binary...
[2026-03-10 01:48:09] which: no apptainer in ((null))
[2026-03-10 01:48:09] apptainer is not installed, using version from CVMFS
[2026-03-10 01:48:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 01:48:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-10 01:48:09] apptainer works
[2026-03-10 01:48:09] Set ATHENA_PROC_NUMBER=4
[2026-03-10 01:48:09] Set ATHENA_CORE_NUMBER=4
[2026-03-10 01:48:09] Starting ATLAS job with PandaID=7039099642
[2026-03-10 01:48:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:09:36]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:09:36]  filetype=log
[2026-03-10 03:09:36]  guid=5338a788-c68e-4cd6-9d88-3eb505d63e19
[2026-03-10 03:09:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 03:09:36]  is_altstaged=None
[2026-03-10 03:09:36]  is_tar=False
[2026-03-10 03:09:36]  lfn=log.48955010._011095.job.log.tgz.1
[2026-03-10 03:09:36]  mtime=0
[2026-03-10 03:09:36]  protocol_id=None
[2026-03-10 03:09:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 03:09:36]  replicas=None
[2026-03-10 03:09:36]  scope=mc23_13p6TeV
[2026-03-10 03:09:36]  status=None
[2026-03-10 03:09:36]  status_code=0
[2026-03-10 03:09:36]  storage_token=
[2026-03-10 03:09:36]  surl=/var/lib/boinc/var/slot16/slots/3/PanDA_Pilot-7039099642/log.48955010._011095.job.log.tgz.1
[2026-03-10 03:09:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/ec/log.48955010._011095.job.log.tgz.1
[2026-03-10 03:09:36]  workdir=None
[2026-03-10 03:09:36] ]
[2026-03-10 03:09:36] 2026-03-10 02:08:45,139 | INFO     | transferring file log.48955010._011095.job.log.tgz.1 from /var/lib/boinc/var/slot16/slots/3/PanDA_Pilot-7039099642/log.48955010._011095.job.log.tgz.1 to /var/lib/b
[2026-03-10 03:09:36] 2026-03-10 02:08:45,140 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot16/slots/3/PanDA_Pilot-7039099642/log.48955010._011095.job.log.tgz.1 /var/lib/boinc/var/slot16/slots/3/lo
[2026-03-10 03:09:36] 2026-03-10 02:08:45,158 | INFO     | adding to output.list: log.48955010._011095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/ec/log.48955010._011095.job.log.tg
[2026-03-10 03:09:36] 2026-03-10 02:08:45,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 03:09:36] 2026-03-10 02:08:45,159 | INFO     | summary of transferred files:
[2026-03-10 03:09:36] 2026-03-10 02:08:45,159 | INFO     |  -- lfn=log.48955010._011095.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 03:09:36] 2026-03-10 02:08:45,159 | INFO     | stage-out finished correctly
[2026-03-10 03:09:36] 2026-03-10 02:08:46,409 | INFO     | time since job start (4824s) is within the limit (349056.0s)
[2026-03-10 03:09:36] 2026-03-10 02:08:47,071 | INFO     | monitor loop #347: job 0:7039099642 is in state 'finished'
[2026-03-10 03:09:36] 2026-03-10 02:08:47,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,418 | INFO     | time since job start (4826s) is within the limit (349056.0s)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,459 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 03:09:36] 2026-03-10 02:08:48,797 | INFO     | job 7039099642 has state=finished
[2026-03-10 03:09:36] 2026-03-10 02:08:48,797 | INFO     | preparing for final server update for job 7039099642 in state='finished'
[2026-03-10 03:09:36] 2026-03-10 02:08:48,797 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/3/PanDA_Pilot-7039099642/jobReport.json
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/3/workernode_map.json
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | INFO     | job 7039099642 has finished - writing final server update
[2026-03-10 03:09:36] 2026-03-10 02:08:48,799 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3496250/.job.ad'
[2026-03-10 03:09:36] 2026-03-10 02:08:48,800 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,817 | INFO     | using path: /var/lib/boinc/var/slot16/slots/3/PanDA_Pilot-7039099642/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,818 | INFO     | extracted standard info from prmon json
[2026-03-10 03:09:36] 2026-03-10 02:08:48,818 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:09:36] 2026-03-10 02:08:48,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:09:36] 2026-03-10 02:08:48,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:09:36] 2026-03-10 02:08:48,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:09:36] 2026-03-10 02:08:48,819 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:09:36] 2026-03-10 02:08:48,819 | INFO     | sum of square deviations: 115715658.0
[2026-03-10 03:09:36] 2026-03-10 02:08:48,819 | INFO     | sum of deviations: 165045595.5
[2026-03-10 03:09:36] 2026-03-10 02:08:48,819 | INFO     | mean x: 1773106194.5
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | mean y: 2323594.013888889
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | intersect: -2526663172.4614944
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | chi2: 0.00019361996854820438
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | current memory leak: 1.43 B/s (using 72 data points, chi2=0.00)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | could have reported an average CPU frequency of 3576 MHz (6 samples)
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | ..............................
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . Timing measurements:
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . get job = 0 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . initial setup = 5 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . payload setup = 5 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . stage-in = 0 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . payload execution = 4799 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . stage-out = 0 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | . log creation = 0 s
[2026-03-10 03:09:36] 2026-03-10 02:08:48,820 | INFO     | ..............................
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | 
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | job summary report
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | --------------------------------------------------
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | PanDA job id: 7039099642
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | task id: 48955010
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | errors: (none)
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | pilot state: finished 
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | transexitcode: 0
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | exeerrorcode: 0
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | exeerrordiag: 
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | exitcode: 0
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | exitmsg: OK
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | cpuconsumptiontime: 18276 s
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | nevents: 400
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | neventsw: 0
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | pid: 663121
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | pgrp: 663121
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | corecount: 4
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | event service: False
[2026-03-10 03:09:36] 2026-03-10 02:08:49,135 | INFO     | sizes: {0: 2280190, 11: 2280190, 4809: 2306502, 4811: 2315522, 4814: 2315578, 4815: 2315772}
[2026-03-10 03:09:36] 2026-03-10 02:08:49,136 | INFO     | --------------------------------------------------
[2026-03-10 03:09:36] 2026-03-10 02:08:49,136 | INFO     | 
[2026-03-10 03:09:36] 2026-03-10 02:08:49,136 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/3
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:09:36] 2026-03-10 02:08:49,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:09:36] 2026-03-10 02:08:49,160 | INFO     | job 7039099642 has completed (purged errors)
[2026-03-10 03:09:36] 2026-03-10 02:08:49,160 | INFO     | overall cleanup function is called
[2026-03-10 03:09:36] 2026-03-10 02:08:50,168 | INFO     | --- collectZombieJob: --- 10, [663121]
[2026-03-10 03:09:36] 2026-03-10 02:08:50,168 | INFO     | zombie collector waiting for pid 663121
[2026-03-10 03:09:36] 2026-03-10 02:08:50,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:09:36] 2026-03-10 02:08:50,168 | INFO     | collected zombie processes
[2026-03-10 03:09:36] 2026-03-10 02:08:50,168 | INFO     | will attempt to kill all subprocesses of pid=663121
[2026-03-10 03:09:36] 2026-03-10 02:08:50,634 | INFO     | process IDs to be killed: [663121] (in reverse order)
[2026-03-10 03:09:36] 2026-03-10 02:08:50,910 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:09:36] 2026-03-10 02:08:50,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:09:36] 2026-03-10 02:08:50,942 | INFO     | did not find any defunct processes belonging to 663121
[2026-03-10 03:09:36] 2026-03-10 02:08:50,966 | INFO     | did not find any defunct processes belonging to 663121
[2026-03-10 03:09:36] 2026-03-10 02:08:50,966 | INFO     | ready for new job
[2026-03-10 03:09:36] 2026-03-10 02:08:50,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:09:36] 2026-03-10 02:08:50,967 | INFO     | **************************************
[2026-03-10 03:09:36] 2026-03-10 02:08:50,967 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:09:36] 2026-03-10 02:08:50,967 | INFO     | **************************************
[2026-03-10 03:09:36] 2026-03-10 02:08:50,967 | INFO     | 
[2026-03-10 03:09:36] 2026-03-10 02:08:50,973 | INFO     | architecture information:
[2026-03-10 03:09:36] 2026-03-10 02:08:50,974 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:09:36] 2026-03-10 02:08:50,996 | INFO     | cat /etc/os-release:
[2026-03-10 03:09:36] NAME="CentOS Linux"
[2026-03-10 03:09:36] VERSION="7 (Core)"
[2026-03-10 03:09:36] ID="centos"
[2026-03-10 03:09:36] ID_LIKE="rhel fedora"
[2026-03-10 03:09:36] VERSION_ID="7"
[2026-03-10 03:09:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:09:36] ANSI_COLOR="0;31"
[2026-03-10 03:09:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:09:36] HOME_URL="https://www.centos.org/"
[2026-03-10 03:09:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:09:36] 
[2026-03-10 03:09:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:09:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:09:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:09:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:09:36] 
[2026-03-10 03:09:36] 2026-03-10 02:08:50,996 | INFO     | **************************************
[2026-03-10 03:09:36] 2026-03-10 02:08:51,499 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/3
[2026-03-10 03:09:36] 2026-03-10 02:08:51,515 | INFO     | sufficient remaining disk space (20761804800 B)
[2026-03-10 03:09:36] 2026-03-10 02:08:51,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:09:36] 2026-03-10 02:08:51,515 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:09:36] 2026-03-10 02:08:51,516 | INFO     | update_server=False
[2026-03-10 03:09:36] 2026-03-10 02:08:51,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:09:36] 2026-03-10 02:08:51,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:09:36] 2026-03-10 02:08:51,516 | INFO     | aborting loop
[2026-03-10 03:09:36] 2026-03-10 02:08:51,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:09:36] 2026-03-10 02:08:51,812 | INFO     | all data control threads have been joined
[2026-03-10 03:09:36] 2026-03-10 02:08:52,521 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:52,521 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:52,763 | INFO     | all job control threads have been joined
[2026-03-10 03:09:36] 2026-03-10 02:08:52,817 | INFO     | [data] control thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:52,836 | INFO     | all payload control threads have been joined
[2026-03-10 03:09:36] 2026-03-10 02:08:52,901 | INFO     | [job] validate thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:52,905 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,042 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,146 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,155 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,162 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,521 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,675 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,765 | INFO     | [job] control thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,841 | INFO     | [payload] control thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:53,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:09:36] 2026-03-10 02:08:53,944 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:54,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:09:36] 2026-03-10 02:08:54,884 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:08:58,529 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:09:36] 2026-03-10 02:09:22,047 | INFO     | PID=650317 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 03:09:36] 2026-03-10 02:09:22,048 | INFO     | .. there are 64 such processes running
[2026-03-10 03:09:36] 2026-03-10 02:09:22,049 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:09:36] 2026-03-10 02:09:22,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:09:36] 2026-03-10 02:09:22,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:09:36] 2026-03-10 02:09:30,484 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:09:36] 2026-03-10 02:09:30,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22414911067968)>', '<ExcThread(monitor, started 22414665975552)>']
[2026-03-10 03:09:36] 2026-03-10 02:09:31,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:09:36] 2026-03-10 02:09:31,094 | INFO     | [monitor] control thread has ended
[2026-03-10 03:09:36] 2026-03-10 02:09:35,914 | INFO     | all workflow threads have been joined
[2026-03-10 03:09:36] 2026-03-10 02:09:35,914 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:09:36] 2026-03-10 02:09:35,914 | INFO     | traces error code: 0
[2026-03-10 03:09:36] 2026-03-10 02:09:35,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:09:36] 2026-03-10 02:09:36,063 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:09:36] 2026-03-10 02:09:36,086 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:09:36] 2026-03-10 02:09:36,097 [wrapper] pilotpid: 650317
[2026-03-10 03:09:36] 2026-03-10 02:09:36,104 [wrapper] Pilot exit status: 0
[2026-03-10 03:09:36] 2026-03-10 02:09:36,126 [wrapper] pandaids: 7039099642
[2026-03-10 03:09:36] 2026-03-10 02:09:36,232 [wrapper] cleanup supervisor_pilot 1533553 650318
[2026-03-10 03:09:36] 2026-03-10 02:09:36,238 [wrapper] Test setup, not cleaning
[2026-03-10 03:09:36] 2026-03-10 02:09:36,242 [wrapper] apfmon messages muted
[2026-03-10 03:09:36] 2026-03-10 02:09:36,248 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:09:36] 2026-03-10 02:09:36,251 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:09:36]  *** Error codes and diagnostics ***
[2026-03-10 03:09:36]     "exeErrorCode": 0,
[2026-03-10 03:09:36]     "exeErrorDiag": "",
[2026-03-10 03:09:36]     "pilotErrorCode": 0,
[2026-03-10 03:09:36]     "pilotErrorDiag": "",
[2026-03-10 03:09:36]  *** Listing of results directory ***
[2026-03-10 03:09:36] total 1018172
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:56 pilot3.tar.gz
[2026-03-10 03:09:36] -rwx------. 1 boinc boinc     36322 Mar  7 13:34 runpilot2-wrapper.sh
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc      5111 Mar  7 13:34 queuedata.json
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc       100 Mar  8 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:09:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 11:55 run_atlas
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc       105 Mar  8 11:55 job.xml
[2026-03-10 03:09:36] -rw-------. 2 boinc boinc  27590656 Mar  8 12:02 copy_BKAbKJ
[2026-03-10 03:09:36] -rw-------. 2 boinc boinc 388497408 Mar  9 15:48 copy_pPRno9
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc 437330604 Mar 10 01:48 EVNT.46701403._001222.pool.root.1
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc      6700 Mar 10 01:48 init_data.xml
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc     15845 Mar 10 01:48 start_atlas.sh
[2026-03-10 03:09:36] drwxrwx--x. 2 boinc boinc      4096 Mar 10 01:48 shared
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc    597953 Mar 10 01:48 input.tar.gz
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc         0 Mar 10 01:48 boinc_lockfile
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc      2563 Mar 10 01:48 pandaJob.out
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc   1002346 Mar 10 01:48 agis_schedconf.cvmfs.json
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc   1511578 Mar 10 01:48 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc       444 Mar 10 01:48 workernode_map.json
[2026-03-10 03:09:36] drwx------. 5 boinc boinc      4096 Mar 10 01:48 pilot3
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc 183236506 Mar 10 03:08 HITS.48955010._011095.pool.root.1
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc       530 Mar 10 03:08 boinc_task_state.xml
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc      1029 Mar 10 03:08 memory_monitor_summary.json
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc    297811 Mar 10 03:08 log.48955010._011095.job.log.tgz.1
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc      6357 Mar 10 03:08 heartbeat.json
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc      8192 Mar 10 03:09 boinc_mmap_file
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc        27 Mar 10 03:09 wrapper_checkpoint.txt
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc        95 Mar 10 03:09 pilot_heartbeat.json
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc      4828 Mar 10 03:09 pilotlog.txt
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc    705609 Mar 10 03:09 log.48955010._011095.job.log.1
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc       357 Mar 10 03:09 output.list
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc       620 Mar 10 03:09 runtime_log
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc   1024000 Mar 10 03:09 result.tar.gz
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc      9204 Mar 10 03:09 runtime_log.err
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc       661 Mar 10 03:09 Qr7NDmY25I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhXTLDmJpU9Co.diag
[2026-03-10 03:09:36] -rw-r--r--. 1 boinc boinc     21156 Mar 10 03:09 stderr.txt
[2026-03-10 03:09:36] HITS file was successfully produced:
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc 183236506 Mar 10 03:08 shared/HITS.pool.root.1
[2026-03-10 03:09:36]  *** Contents of shared directory: ***
[2026-03-10 03:09:36] total 1013980
[2026-03-10 03:09:36] -rw-------. 2 boinc boinc  27590656 Mar  8 12:02 copy_BKAbKJ
[2026-03-10 03:09:36] -rw-------. 2 boinc boinc 388497408 Mar  9 15:48 copy_pPRno9
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc 437330604 Mar 10 01:48 ATLAS.root_0
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc     15845 Mar 10 01:48 start_atlas.sh
[2026-03-10 03:09:36] -rw-r--r--. 2 boinc boinc    597953 Mar 10 01:48 input.tar.gz
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc 183236506 Mar 10 03:08 HITS.pool.root.1
[2026-03-10 03:09:36] -rw-------. 1 boinc boinc   1024000 Mar 10 03:09 result.tar.gz
03:09:38 (645806): run_atlas exited; CPU time 18472.478024
03:09:38 (645806): called boinc_finish(0)

</stderr_txt>
]]>

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