Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:39 (148326): wrapper (7.7.26015): starting
07:33:39 (148326): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 07:33:39] Arguments: --nthreads 4
[2026-03-08 07:33:39] Threads: 4
[2026-03-08 07:33:39] Checking for CVMFS
[2026-03-08 07:33:39] No cvmfs_config command found, will try listing directly
[2026-03-08 07:33:39] CVMFS is ok
[2026-03-08 07:33:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 07:33:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 07:33:39] Further information can be found at the LHC@home message board.
[2026-03-08 07:33:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 07:33:39] Checking for apptainer binary...
[2026-03-08 07:33:39] which: no apptainer in ((null))
[2026-03-08 07:33:39] apptainer is not installed, using version from CVMFS
[2026-03-08 07:33:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 07:33:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-08 07:33:40] apptainer works
[2026-03-08 07:33:40] Set ATHENA_PROC_NUMBER=4
[2026-03-08 07:33:40] Set ATHENA_CORE_NUMBER=4
[2026-03-08 07:33:40] Starting ATLAS job with PandaID=7039099611
[2026-03-08 07:33:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 09:00:14]  *** The last 200 lines of the pilot log: ***
[2026-03-08 09:00:14]  guid=bbda8bd4-9750-4280-8752-400af17524f8
[2026-03-08 09:00:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 09:00:14]  is_altstaged=None
[2026-03-08 09:00:14]  is_tar=False
[2026-03-08 09:00:14]  lfn=log.48955010._011064.job.log.tgz.1
[2026-03-08 09:00:14]  mtime=0
[2026-03-08 09:00:14]  protocol_id=None
[2026-03-08 09:00:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 09:00:14]  replicas=None
[2026-03-08 09:00:14]  scope=mc23_13p6TeV
[2026-03-08 09:00:14]  status=None
[2026-03-08 09:00:14]  status_code=0
[2026-03-08 09:00:14]  storage_token=
[2026-03-08 09:00:14]  surl=/var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7039099611/log.48955010._011064.job.log.tgz.1
[2026-03-08 09:00:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/b4/log.48955010._011064.job.log.tgz.1
[2026-03-08 09:00:14]  workdir=None
[2026-03-08 09:00:14] ]
[2026-03-08 09:00:14] 2026-03-08 07:59:13,329 | INFO     | transferring file log.48955010._011064.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7039099611/log.48955010._011064.job.log.tgz.1 to /var/lib/b
[2026-03-08 09:00:14] 2026-03-08 07:59:13,329 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7039099611/log.48955010._011064.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/3/lo
[2026-03-08 09:00:14] 2026-03-08 07:59:13,345 | INFO     | adding to output.list: log.48955010._011064.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/b4/log.48955010._011064.job.log.tg
[2026-03-08 09:00:14] 2026-03-08 07:59:13,345 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 09:00:14] 2026-03-08 07:59:13,345 | INFO     | summary of transferred files:
[2026-03-08 09:00:14] 2026-03-08 07:59:13,345 | INFO     |  -- lfn=log.48955010._011064.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 09:00:14] 2026-03-08 07:59:13,346 | INFO     | stage-out finished correctly
[2026-03-08 09:00:14] 2026-03-08 07:59:14,881 | INFO     | monitor loop #357: job 0:7039099611 is in state 'finished'
[2026-03-08 09:00:14] 2026-03-08 07:59:14,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 09:00:14] 2026-03-08 07:59:15,129 | INFO     | time since job start (5116s) is within the limit (349056.0s)
[2026-03-08 09:00:14] 2026-03-08 07:59:16,482 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 09:00:14] 2026-03-08 07:59:17,075 | INFO     | job 7039099611 has state=finished
[2026-03-08 09:00:14] 2026-03-08 07:59:17,076 | INFO     | preparing for final server update for job 7039099611 in state='finished'
[2026-03-08 09:00:14] 2026-03-08 07:59:17,076 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7039099611/jobReport.json
[2026-03-08 09:00:14] 2026-03-08 07:59:17,077 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/3/workernode_map.json
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | INFO     | this job has now completed (state=finished)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | INFO     | log transfer has been attempted: DONE
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | INFO     | job 7039099611 has finished - writing final server update
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4132158/.job.ad'
[2026-03-08 09:00:14] 2026-03-08 07:59:17,078 | INFO     | total number of processed events: 400 (read)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,096 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7039099611/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,097 | INFO     | extracted standard info from prmon json
[2026-03-08 09:00:14] 2026-03-08 07:59:17,097 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 09:00:14] 2026-03-08 07:59:17,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 09:00:14] 2026-03-08 07:59:17,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 09:00:14] 2026-03-08 07:59:17,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 09:00:14] 2026-03-08 07:59:17,098 | INFO     | fitting pss+swap vs Time
[2026-03-08 09:00:14] 2026-03-08 07:59:17,098 | INFO     | sum of square deviations: 141539398.0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | sum of deviations: -131529114.99999988
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | mean x: 1772954291.0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | mean y: 2324171.1558441557
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | intersect: 1649887408.8536775
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | chi2: 0.00043570865571418947
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | current memory leak: -0.93 B/s (using 77 data points, chi2=0.00)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | could have reported an average CPU frequency of 3541 MHz (6 samples)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | ..............................
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | . Timing measurements:
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | . get job = 0 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | . initial setup = 6 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | . payload setup = 9 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,099 | INFO     | . stage-in = 0 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,100 | INFO     | . payload execution = 5088 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,100 | INFO     | . stage-out = 0 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,100 | INFO     | . log creation = 0 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,100 | INFO     | ..............................
[2026-03-08 09:00:14] 2026-03-08 07:59:17,137 | INFO     | time since job start (5118s) is within the limit (349056.0s)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | 
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | job summary report
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | --------------------------------------------------
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | PanDA job id: 7039099611
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | task id: 48955010
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | errors: (none)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | pilot state: finished 
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | transexitcode: 0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | exeerrorcode: 0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,575 | INFO     | exeerrordiag: 
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | exitcode: 0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | exitmsg: OK
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | cpuconsumptiontime: 18932 s
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | nevents: 400
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | neventsw: 0
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | pid: 160871
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | pgrp: 160871
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | corecount: 4
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | event service: False
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | sizes: {0: 2295763, 11: 2295763, 5101: 2322278, 5102: 2331298, 5105: 2331354, 5106: 2331548}
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | --------------------------------------------------
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | 
[2026-03-08 09:00:14] 2026-03-08 07:59:17,576 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | job 7039099611 has completed (purged errors)
[2026-03-08 09:00:14] 2026-03-08 07:59:17,593 | INFO     | overall cleanup function is called
[2026-03-08 09:00:14] 2026-03-08 07:59:18,601 | INFO     | --- collectZombieJob: --- 10, [160871]
[2026-03-08 09:00:14] 2026-03-08 07:59:18,601 | INFO     | zombie collector waiting for pid 160871
[2026-03-08 09:00:14] 2026-03-08 07:59:18,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 09:00:14] 2026-03-08 07:59:18,601 | INFO     | collected zombie processes
[2026-03-08 09:00:14] 2026-03-08 07:59:18,601 | INFO     | will attempt to kill all subprocesses of pid=160871
[2026-03-08 09:00:14] 2026-03-08 07:59:19,143 | INFO     | process IDs to be killed: [160871] (in reverse order)
[2026-03-08 09:00:14] 2026-03-08 07:59:19,405 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 09:00:14] 2026-03-08 07:59:19,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 09:00:14] 2026-03-08 07:59:19,442 | INFO     | did not find any defunct processes belonging to 160871
[2026-03-08 09:00:14] 2026-03-08 07:59:19,478 | INFO     | did not find any defunct processes belonging to 160871
[2026-03-08 09:00:14] 2026-03-08 07:59:19,478 | INFO     | ready for new job
[2026-03-08 09:00:14] 2026-03-08 07:59:19,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 09:00:14] 2026-03-08 07:59:19,479 | INFO     | **************************************
[2026-03-08 09:00:14] 2026-03-08 07:59:19,479 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 09:00:14] 2026-03-08 07:59:19,479 | INFO     | **************************************
[2026-03-08 09:00:14] 2026-03-08 07:59:19,479 | INFO     | 
[2026-03-08 09:00:14] 2026-03-08 07:59:19,485 | INFO     | architecture information:
[2026-03-08 09:00:14] 2026-03-08 07:59:19,485 | INFO     | executing command: cat /etc/os-release
[2026-03-08 09:00:14] 2026-03-08 07:59:19,496 | INFO     | cat /etc/os-release:
[2026-03-08 09:00:14] NAME="CentOS Linux"
[2026-03-08 09:00:14] VERSION="7 (Core)"
[2026-03-08 09:00:14] ID="centos"
[2026-03-08 09:00:14] ID_LIKE="rhel fedora"
[2026-03-08 09:00:14] VERSION_ID="7"
[2026-03-08 09:00:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 09:00:14] ANSI_COLOR="0;31"
[2026-03-08 09:00:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 09:00:14] HOME_URL="https://www.centos.org/"
[2026-03-08 09:00:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 09:00:14] 
[2026-03-08 09:00:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 09:00:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 09:00:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 09:00:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 09:00:14] 
[2026-03-08 09:00:14] 2026-03-08 07:59:19,496 | INFO     | **************************************
[2026-03-08 09:00:14] 2026-03-08 07:59:19,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-03-08 09:00:14] 2026-03-08 07:59:20,016 | INFO     | sufficient remaining disk space (42845863936 B)
[2026-03-08 09:00:14] 2026-03-08 07:59:20,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 09:00:14] 2026-03-08 07:59:20,017 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 09:00:14] 2026-03-08 07:59:20,017 | INFO     | update_server=False
[2026-03-08 09:00:14] 2026-03-08 07:59:20,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 09:00:14] 2026-03-08 07:59:20,245 | INFO     | all payload control threads have been joined
[2026-03-08 09:00:14] 2026-03-08 07:59:20,334 | INFO     | all data control threads have been joined
[2026-03-08 09:00:14] 2026-03-08 07:59:20,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:00:14] 2026-03-08 07:59:20,898 | INFO     | aborting loop
[2026-03-08 09:00:14] 2026-03-08 07:59:21,022 | INFO     | [job] retrieve thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:21,026 | INFO     | [payload] validate_post thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:21,056 | INFO     | all job control threads have been joined
[2026-03-08 09:00:14] 2026-03-08 07:59:21,251 | INFO     | [payload] control thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:21,340 | INFO     | [data] control thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:21,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 09:00:14] 2026-03-08 07:59:21,903 | INFO     | [job] job monitor thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:21,980 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,010 | INFO     | [job] validate thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,038 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,061 | INFO     | [job] control thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:00:14] 2026-03-08 07:59:22,237 | INFO     | [payload] failed_post thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,334 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,463 | INFO     | [data] copytool_in thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:22,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 09:00:14] 2026-03-08 07:59:23,205 | INFO     | [job] queue monitor thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:23,421 | INFO     | [data] copytool_out thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:26,550 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:30,472 | INFO     | job.realtimelogging is not enabled
[2026-03-08 09:00:14] 2026-03-08 07:59:31,478 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 09:00:14] 2026-03-08 07:59:50,961 | INFO     | PID=152961 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 09:00:14] 2026-03-08 07:59:50,961 | INFO     | .. there are 53 such processes running
[2026-03-08 09:00:14] 2026-03-08 07:59:50,961 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 09:00:14] 2026-03-08 07:59:50,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 09:00:14] 2026-03-08 07:59:50,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 09:00:14] 2026-03-08 08:00:07,990 | INFO     | [monitor] cgroup control has ended
[2026-03-08 09:00:14] 2026-03-08 08:00:09,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22370990860096)>', '<ExcThread(monitor, started 22370745317120)>']
[2026-03-08 09:00:14] 2026-03-08 08:00:09,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 09:00:14] 2026-03-08 08:00:09,057 | INFO     | [monitor] control thread has ended
[2026-03-08 09:00:14] 2026-03-08 08:00:14,031 | INFO     | all workflow threads have been joined
[2026-03-08 09:00:14] 2026-03-08 08:00:14,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 09:00:14] 2026-03-08 08:00:14,032 | INFO     | traces error code: 0
[2026-03-08 09:00:14] 2026-03-08 08:00:14,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 09:00:14] 2026-03-08 08:00:14,205 [wrapper] ==== pilot stdout END ====
[2026-03-08 09:00:14] 2026-03-08 08:00:14,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 09:00:14] 2026-03-08 08:00:14,209 [wrapper] pilotpid: 152961
[2026-03-08 09:00:14] 2026-03-08 08:00:14,211 [wrapper] Pilot exit status: 0
[2026-03-08 09:00:14] 2026-03-08 08:00:14,218 [wrapper] pandaids: 7039099611
[2026-03-08 09:00:14] 2026-03-08 08:00:14,360 [wrapper] cleanup supervisor_pilot  997087 152962
[2026-03-08 09:00:14] 2026-03-08 08:00:14,364 [wrapper] Test setup, not cleaning
[2026-03-08 09:00:14] 2026-03-08 08:00:14,367 [wrapper] apfmon messages muted
[2026-03-08 09:00:14] 2026-03-08 08:00:14,369 [wrapper] ==== wrapper stdout END ====
[2026-03-08 09:00:14] 2026-03-08 08:00:14,372 [wrapper] ==== wrapper stderr END ====
[2026-03-08 09:00:14]  *** Error codes and diagnostics ***
[2026-03-08 09:00:14]     "exeErrorCode": 0,
[2026-03-08 09:00:14]     "exeErrorDiag": "",
[2026-03-08 09:00:14]     "pilotErrorCode": 0,
[2026-03-08 09:00:14]     "pilotErrorDiag": "",
[2026-03-08 09:00:14]  *** Listing of results directory ***
[2026-03-08 09:00:14] total 606953
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:56 pilot3.tar.gz
[2026-03-08 09:00:14] -rwx------. 1 boinc boinc     36322 Mar  7 13:34 runpilot2-wrapper.sh
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc      5111 Mar  7 13:34 queuedata.json
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc       100 Mar  8 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 09:00:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 07:33 run_atlas
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc       105 Mar  8 07:33 job.xml
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc 437330604 Mar  8 07:33 EVNT.46701403._001222.pool.root.1
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc     15845 Mar  8 07:33 start_atlas.sh
[2026-03-08 09:00:14] drwxrwx--x. 2 boinc boinc         5 Mar  8 07:33 shared
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc    597957 Mar  8 07:33 input.tar.gz
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc      6703 Mar  8 07:33 init_data.xml
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc         0 Mar  8 07:33 boinc_lockfile
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc      2562 Mar  8 07:33 pandaJob.out
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc    999169 Mar  8 07:33 agis_schedconf.cvmfs.json
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc   1521291 Mar  8 07:33 agis_ddmendpoints.agis.ALL.json
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc       443 Mar  8 07:33 workernode_map.json
[2026-03-08 09:00:14] drwx------. 5 boinc boinc        22 Mar  8 07:33 pilot3
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc       530 Mar  8 08:58 boinc_task_state.xml
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc 181623144 Mar  8 08:58 HITS.48955010._011064.pool.root.1
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc      1058 Mar  8 08:59 memory_monitor_summary.json
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc    269589 Mar  8 08:59 log.48955010._011064.job.log.tgz.1
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc      6379 Mar  8 08:59 heartbeat.json
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc        95 Mar  8 08:59 pilot_heartbeat.json
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc      8192 Mar  8 09:00 boinc_mmap_file
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc        27 Mar  8 09:00 wrapper_checkpoint.txt
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc      4900 Mar  8 09:00 pilotlog.txt
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc    736186 Mar  8 09:00 log.48955010._011064.job.log.1
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc       357 Mar  8 09:00 output.list
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc       620 Mar  8 09:00 runtime_log
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc   1024000 Mar  8 09:00 result.tar.gz
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc      9204 Mar  8 09:00 runtime_log.err
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc       670 Mar  8 09:00 4mUNDmY25I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZXTLDmgVw9Nn.diag
[2026-03-08 09:00:14] -rw-r--r--. 1 boinc boinc     21223 Mar  8 09:00 stderr.txt
[2026-03-08 09:00:14] HITS file was successfully produced:
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc 181623144 Mar  8 08:58 shared/HITS.pool.root.1
[2026-03-08 09:00:14]  *** Contents of shared directory: ***
[2026-03-08 09:00:14] total 605475
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc 437330604 Mar  8 07:33 ATLAS.root_0
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc     15845 Mar  8 07:33 start_atlas.sh
[2026-03-08 09:00:14] -rw-r--r--. 2 boinc boinc    597957 Mar  8 07:33 input.tar.gz
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc 181623144 Mar  8 08:58 HITS.pool.root.1
[2026-03-08 09:00:14] -rw-------. 1 boinc boinc   1024000 Mar  8 09:00 result.tar.gz
09:00:16 (148326): run_atlas exited; CPU time 19201.833713
09:00:16 (148326): called boinc_finish(0)

</stderr_txt>
]]>

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