Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:00:35 (1211815): wrapper (7.7.26015): starting
00:00:35 (1211815): wrapper: running run_atlas (--nthreads 3)
[2026-03-08 00:00:35] Arguments: --nthreads 3
[2026-03-08 00:00:35] Threads: 3
[2026-03-08 00:00:35] Checking for CVMFS
[2026-03-08 00:00:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 00:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 00:00:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 00:00:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 00:00:38] 2.9.2.0 12702 7949 81484 157018 2 49 31036574 36864001 0 130560 0 3365021 99.983 295564 11474 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-08 00:00:38] CVMFS is ok
[2026-03-08 00:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 00:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 00:00:38] Further information can be found at the LHC@home message board.
[2026-03-08 00:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 00:00:38] Checking for apptainer binary...
[2026-03-08 00:00:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 00:00:38] Running /usr/bin/apptainer --version
[2026-03-08 00:00:38] apptainer version 1.4.1-1.1
[2026-03-08 00:00:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 00:00:38] thA349
[2026-03-08 00:00:38] apptainer works
[2026-03-08 00:00:39] Set ATHENA_PROC_NUMBER=3
[2026-03-08 00:00:39] Set ATHENA_CORE_NUMBER=3
[2026-03-08 00:00:39] Starting ATLAS job with PandaID=7039032621
[2026-03-08 00:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 01:19:00]  *** The last 200 lines of the pilot log: ***
[2026-03-08 01:19:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 01:19:00] 
[2026-03-08 01:19:00] 2026-03-08 00:17:59,314 | INFO     | **************************************
[2026-03-08 01:19:00] 2026-03-08 00:17:59,817 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-08 01:19:00] 2026-03-08 00:17:59,827 | INFO     | sufficient remaining disk space (271614738432 B)
[2026-03-08 01:19:00] 2026-03-08 00:17:59,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 01:19:00] 2026-03-08 00:17:59,827 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 01:19:00] 2026-03-08 00:17:59,828 | INFO     | update_server=False
[2026-03-08 01:19:00] 2026-03-08 00:17:59,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 01:19:00] 2026-03-08 00:17:59,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 01:19:00] 2026-03-08 00:17:59,831 | WARNING  | process 1220368 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 01:19:00] 2026-03-08 00:17:59,859 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 01:19:00] 2026-03-08 00:17:59,894 | INFO     | number of running child processes to parent process 1220368: 1
[2026-03-08 01:19:00] 2026-03-08 00:17:59,894 | INFO     | maximum number of monitored processes: 6
[2026-03-08 01:19:00] 2026-03-08 00:17:59,894 | INFO     | aborting job monitoring since job object (job id=7039032621) has expired
[2026-03-08 01:19:00] 2026-03-08 00:17:59,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 01:19:00] 2026-03-08 00:17:59,894 | INFO     | will abort loop
[2026-03-08 01:19:00] 2026-03-08 00:17:59,907 | INFO     | all payload control threads have been joined
[2026-03-08 01:19:00] 2026-03-08 00:17:59,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 01:19:00] 2026-03-08 00:18:00,425 | INFO     | all job control threads have been joined
[2026-03-08 01:19:00] 2026-03-08 00:18:00,519 | INFO     | all data control threads have been joined
[2026-03-08 01:19:00] 2026-03-08 00:18:00,833 | INFO     | [job] retrieve thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:00,833 | INFO     | [job] queue monitor thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:00,900 | INFO     | [job] job monitor thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:00,911 | INFO     | [payload] control thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:01,174 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:01,431 | INFO     | [job] control thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:01,525 | INFO     | [data] control thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:01,604 | INFO     | [payload] validate_post thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:01,899 | INFO     | [payload] failed_post thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,003 | INFO     | [data] copytool_out thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,046 | INFO     | [job] validate thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,105 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,193 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,325 | INFO     | [data] copytool_in thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:02,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 01:19:00] 2026-03-08 00:18:06,451 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:09,981 | INFO     | job.realtimelogging is not enabled
[2026-03-08 01:19:00] 2026-03-08 00:18:10,987 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 01:19:00] 2026-03-08 00:18:30,185 | INFO     | PID=1215932 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 01:19:00] 2026-03-08 00:18:30,186 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 01:19:00] 2026-03-08 00:18:30,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 01:19:00] 2026-03-08 00:18:30,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 01:19:00] 2026-03-08 00:18:54,574 | INFO     | [monitor] cgroup control has ended
[2026-03-08 01:19:00] 2026-03-08 00:18:55,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460302600000)>', '<ExcThread(monitor, started 140459414365952)>']
[2026-03-08 01:19:00] 2026-03-08 00:18:56,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 01:19:00] 2026-03-08 00:18:56,322 | INFO     | [monitor] control thread has ended
[2026-03-08 01:19:00] 2026-03-08 00:19:00,657 | INFO     | all workflow threads have been joined
[2026-03-08 01:19:00] 2026-03-08 00:19:00,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 01:19:00] 2026-03-08 00:19:00,658 | INFO     | traces error code: 0
[2026-03-08 01:19:00] 2026-03-08 00:19:00,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 01:19:00] 2026-03-08 00:19:00,709 [wrapper] ==== pilot stdout END ====
[2026-03-08 01:19:00] 2026-03-08 00:19:00,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 01:19:00] 2026-03-08 00:19:00,715 [wrapper] pilotpid: 1215932
[2026-03-08 01:19:00] 2026-03-08 00:19:00,717 [wrapper] Pilot exit status: 0
[2026-03-08 01:19:00] 2026-03-08 00:19:00,725 [wrapper] pandaids: 7039032621
[2026-03-08 01:19:00] 2026-03-08 00:19:00,743 [wrapper] cleanup supervisor_pilot 1225508 1215933
[2026-03-08 01:19:00] 2026-03-08 00:19:00,746 [wrapper] Test setup, not cleaning
[2026-03-08 01:19:00] 2026-03-08 00:19:00,748 [wrapper] apfmon messages muted
[2026-03-08 01:19:00] 2026-03-08 00:19:00,751 [wrapper] ==== wrapper stdout END ====
[2026-03-08 01:19:00] 2026-03-08 00:19:00,753 [wrapper] ==== wrapper stderr END ====
[2026-03-08 01:19:00]  *** Error codes and diagnostics ***
[2026-03-08 01:19:00]     "exeErrorCode": 0,
[2026-03-08 01:19:00]     "exeErrorDiag": "",
[2026-03-08 01:19:00]     "pilotErrorCode": 0,
[2026-03-08 01:19:00]     "pilotErrorDiag": "",
[2026-03-08 01:19:00]  *** Listing of results directory ***
[2026-03-08 01:19:00] total 611308
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc    584627 Mar  7 07:32 pilot3.tar.gz
[2026-03-08 01:19:00] -rwx------ 1 boinc boinc     36322 Mar  7 08:07 runpilot2-wrapper.sh
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      5111 Mar  7 08:07 queuedata.json
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc       100 Mar  8 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 01:19:00] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 00:00 run_atlas
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc       105 Mar  8 00:00 job.xml
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc 436105042 Mar  8 00:00 EVNT.46701403._001191.pool.root.1
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc    597955 Mar  8 00:00 input.tar.gz
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc     15845 Mar  8 00:00 start_atlas.sh
[2026-03-08 01:19:00] drwxrwx--x 2 boinc boinc      4096 Mar  8 00:00 shared
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc         0 Mar  8 00:00 boinc_setup_complete
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      6446 Mar  8 00:00 init_data.xml
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc         0 Mar  8 00:00 boinc_lockfile
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      2563 Mar  8 00:00 pandaJob.out
[2026-03-08 01:19:00] -rw------- 1 boinc boinc    999177 Mar  8 00:00 agis_schedconf.cvmfs.json
[2026-03-08 01:19:00] -rw------- 1 boinc boinc   1521291 Mar  8 00:00 agis_ddmendpoints.agis.ALL.json
[2026-03-08 01:19:00] -rw------- 1 boinc boinc       423 Mar  8 00:00 workernode_map.json
[2026-03-08 01:19:00] drwx------ 5 boinc boinc      4096 Mar  8 00:00 pilot3
[2026-03-08 01:19:00] -rw------- 1 boinc boinc 184040742 Mar  8 01:17 HITS.48955010._009537.pool.root.1
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc       530 Mar  8 01:17 boinc_task_state.xml
[2026-03-08 01:19:00] -rw------- 1 boinc boinc      1017 Mar  8 01:17 memory_monitor_summary.json
[2026-03-08 01:19:00] -rw------- 1 boinc boinc    273979 Mar  8 01:17 log.48955010._009537.job.log.tgz.1
[2026-03-08 01:19:00] -rw------- 1 boinc boinc      6299 Mar  8 01:17 heartbeat.json
[2026-03-08 01:19:00] -rw------- 1 boinc boinc        95 Mar  8 01:18 pilot_heartbeat.json
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      8192 Mar  8 01:18 boinc_mmap_file
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc        27 Mar  8 01:18 wrapper_checkpoint.txt
[2026-03-08 01:19:00] -rw------- 1 boinc boinc      5344 Mar  8 01:19 pilotlog.txt
[2026-03-08 01:19:00] -rw------- 1 boinc boinc    682429 Mar  8 01:19 log.48955010._009537.job.log.1
[2026-03-08 01:19:00] -rw------- 1 boinc boinc       357 Mar  8 01:19 output.list
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc       620 Mar  8 01:19 runtime_log
[2026-03-08 01:19:00] -rw------- 1 boinc boinc    972800 Mar  8 01:19 result.tar.gz
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      8896 Mar  8 01:19 runtime_log.err
[2026-03-08 01:19:00] -rw------- 1 boinc boinc       657 Mar  8 01:19 7JLNDmkv0I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm05ULDmtnfIom.diag
[2026-03-08 01:19:00] -rw-r--r-- 1 boinc boinc      8768 Mar  8 01:19 stderr.txt
[2026-03-08 01:19:00] HITS file was successfully produced:
[2026-03-08 01:19:00] -rw------- 1 boinc boinc 184040742 Mar  8 01:17 shared/HITS.pool.root.1
[2026-03-08 01:19:00]  *** Contents of shared directory: ***
[2026-03-08 01:19:00] total 607172
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc 436105042 Mar  8 00:00 ATLAS.root_0
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc    597955 Mar  8 00:00 input.tar.gz
[2026-03-08 01:19:00] -rw-r--r-- 2 boinc boinc     15845 Mar  8 00:00 start_atlas.sh
[2026-03-08 01:19:00] -rw------- 1 boinc boinc 184040742 Mar  8 01:17 HITS.pool.root.1
[2026-03-08 01:19:00] -rw------- 1 boinc boinc    972800 Mar  8 01:19 result.tar.gz
01:19:02 (1211815): run_atlas exited; CPU time 13095.963728
01:19:02 (1211815): called boinc_finish(0)

</stderr_txt>
]]>

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