Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:55:05 (2326686): wrapper (7.7.26015): starting
07:55:05 (2326686): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 07:55:05] Arguments: --nthreads 4
[2026-03-09 07:55:05] Threads: 4
[2026-03-09 07:55:05] Checking for CVMFS
[2026-03-09 07:55:05] No cvmfs_config command found, will try listing directly
[2026-03-09 07:55:05] CVMFS is ok
[2026-03-09 07:55:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 07:55:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 07:55:05] Further information can be found at the LHC@home message board.
[2026-03-09 07:55:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 07:55:05] Checking for apptainer binary...
[2026-03-09 07:55:05] which: no apptainer in ((null))
[2026-03-09 07:55:05] apptainer is not installed, using version from CVMFS
[2026-03-09 07:55:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 07:55:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 07:55:05] apptainer works
[2026-03-09 07:55:05] Set ATHENA_PROC_NUMBER=4
[2026-03-09 07:55:05] Set ATHENA_CORE_NUMBER=4
[2026-03-09 07:55:05] Starting ATLAS job with PandaID=7039083397
[2026-03-09 07:55:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:12:30]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:12:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 09:12:30]  is_altstaged=None
[2026-03-09 09:12:30]  is_tar=False
[2026-03-09 09:12:30]  lfn=log.48955006._016150.job.log.tgz.1
[2026-03-09 09:12:30]  mtime=0
[2026-03-09 09:12:30]  protocol_id=None
[2026-03-09 09:12:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 09:12:30]  replicas=None
[2026-03-09 09:12:30]  scope=mc23_13p6TeV
[2026-03-09 09:12:30]  status=None
[2026-03-09 09:12:30]  status_code=0
[2026-03-09 09:12:30]  storage_token=
[2026-03-09 09:12:30]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7039083397/log.48955006._016150.job.log.tgz.1
[2026-03-09 09:12:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/7f/log.48955006._016150.job.log.tgz.1
[2026-03-09 09:12:30]  workdir=None
[2026-03-09 09:12:30] ]
[2026-03-09 09:12:30] 2026-03-09 08:11:36,769 | INFO     | transferring file log.48955006._016150.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7039083397/log.48955006._016150.job.log.tgz.1 to /var/lib/
[2026-03-09 09:12:30] 2026-03-09 08:11:36,769 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7039083397/log.48955006._016150.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-09 09:12:30] 2026-03-09 08:11:36,787 | INFO     | adding to output.list: log.48955006._016150.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/7f/log.48955006._016150.job.log.tg
[2026-03-09 09:12:30] 2026-03-09 08:11:36,787 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 09:12:30] 2026-03-09 08:11:36,788 | INFO     | summary of transferred files:
[2026-03-09 09:12:30] 2026-03-09 08:11:36,788 | INFO     |  -- lfn=log.48955006._016150.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 09:12:30] 2026-03-09 08:11:36,788 | INFO     | stage-out finished correctly
[2026-03-09 09:12:30] 2026-03-09 08:11:36,955 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 09:12:30] 2026-03-09 08:11:37,007 | INFO     | job 7039083397 has state=finished
[2026-03-09 09:12:30] 2026-03-09 08:11:37,007 | INFO     | preparing for final server update for job 7039083397 in state='finished'
[2026-03-09 09:12:30] 2026-03-09 08:11:37,556 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,557 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7039083397/jobReport.json
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | this job has now completed (state=finished)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | log transfer has been attempted: DONE
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | job 7039083397 has finished - writing final server update
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18661/.job.ad'
[2026-03-09 09:12:30] 2026-03-09 08:11:37,559 | INFO     | total number of processed events: 400 (read)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,584 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7039083397/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,593 | INFO     | extracted standard info from prmon json
[2026-03-09 09:12:30] 2026-03-09 08:11:37,593 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:12:30] 2026-03-09 08:11:37,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:12:30] 2026-03-09 08:11:37,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:12:30] 2026-03-09 08:11:37,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | sum of square deviations: 97479037.0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | sum of deviations: 496313354.5
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | mean x: 1773041686.5
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | mean y: 2320604.720588235
[2026-03-09 09:12:30] 2026-03-09 08:11:37,595 | INFO     | intersect: -9025099999.51817
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | chi2: 0.00013291031984804518
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | current memory leak: 5.09 B/s (using 68 data points, chi2=0.00)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | could have reported an average CPU frequency of 3612 MHz (6 samples)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | ..............................
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . Timing measurements:
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . get job = 0 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . initial setup = 5 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . payload setup = 4 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . stage-in = 0 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . payload execution = 4559 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . stage-out = 0 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | . log creation = 0 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,596 | INFO     | ..............................
[2026-03-09 09:12:30] 2026-03-09 08:11:37,803 | INFO     | PID=2340109 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,803 | INFO     | .. there are 47 such processes running
[2026-03-09 09:12:30] 2026-03-09 08:11:37,834 | INFO     | 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,834 | INFO     | job summary report
[2026-03-09 09:12:30] 2026-03-09 08:11:37,834 | INFO     | --------------------------------------------------
[2026-03-09 09:12:30] 2026-03-09 08:11:37,834 | INFO     | PanDA job id: 7039083397
[2026-03-09 09:12:30] 2026-03-09 08:11:37,834 | INFO     | task id: 48955006
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | errors: (none)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | pilot state: finished 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | transexitcode: 0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | exeerrorcode: 0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | exeerrordiag: 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | exitcode: 0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | exitmsg: OK
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | cpuconsumptiontime: 17470 s
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | nevents: 400
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | neventsw: 0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | pid: 2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | pgrp: 2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | corecount: 4
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | event service: False
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | sizes: {0: 2280242, 11: 2280242, 4567: 2306444, 4568: 2315660}
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | --------------------------------------------------
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | 
[2026-03-09 09:12:30] 2026-03-09 08:11:37,835 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-09 09:12:30] 2026-03-09 08:11:37,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | job 7039083397 has completed (purged errors)
[2026-03-09 09:12:30] 2026-03-09 08:11:37,852 | INFO     | overall cleanup function is called
[2026-03-09 09:12:30] 2026-03-09 08:11:38,859 | INFO     | --- collectZombieJob: --- 10, [2363071]
[2026-03-09 09:12:30] 2026-03-09 08:11:38,859 | INFO     | zombie collector waiting for pid 2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:38,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:12:30] 2026-03-09 08:11:38,859 | INFO     | collected zombie processes
[2026-03-09 09:12:30] 2026-03-09 08:11:38,859 | INFO     | will attempt to kill all subprocesses of pid=2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:39,300 | INFO     | process IDs to be killed: [2363071] (in reverse order)
[2026-03-09 09:12:30] 2026-03-09 08:11:39,511 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:12:30] 2026-03-09 08:11:39,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:12:30] 2026-03-09 08:11:39,542 | INFO     | did not find any defunct processes belonging to 2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:39,570 | INFO     | did not find any defunct processes belonging to 2363071
[2026-03-09 09:12:30] 2026-03-09 08:11:39,570 | INFO     | ready for new job
[2026-03-09 09:12:30] 2026-03-09 08:11:39,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:12:30] 2026-03-09 08:11:39,571 | INFO     | **************************************
[2026-03-09 09:12:30] 2026-03-09 08:11:39,572 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:12:30] 2026-03-09 08:11:39,572 | INFO     | **************************************
[2026-03-09 09:12:30] 2026-03-09 08:11:39,572 | INFO     | 
[2026-03-09 09:12:30] 2026-03-09 08:11:39,577 | INFO     | architecture information:
[2026-03-09 09:12:30] 2026-03-09 08:11:39,578 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:12:30] 2026-03-09 08:11:39,595 | INFO     | cat /etc/os-release:
[2026-03-09 09:12:30] NAME="CentOS Linux"
[2026-03-09 09:12:30] VERSION="7 (Core)"
[2026-03-09 09:12:30] ID="centos"
[2026-03-09 09:12:30] ID_LIKE="rhel fedora"
[2026-03-09 09:12:30] VERSION_ID="7"
[2026-03-09 09:12:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:12:30] ANSI_COLOR="0;31"
[2026-03-09 09:12:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:12:30] HOME_URL="https://www.centos.org/"
[2026-03-09 09:12:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:12:30] 
[2026-03-09 09:12:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:12:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:12:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:12:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:12:30] 
[2026-03-09 09:12:30] 2026-03-09 08:11:39,596 | INFO     | **************************************
[2026-03-09 09:12:30] 2026-03-09 08:11:40,098 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | INFO     | sufficient remaining disk space (20881342464 B)
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | INFO     | update_server=False
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:12:30] 2026-03-09 08:11:40,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:12:30] 2026-03-09 08:11:40,442 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 09:12:30] 2026-03-09 08:11:40,442 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 09:12:30] 2026-03-09 08:11:40,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:12:30] 2026-03-09 08:11:40,443 | INFO     | will abort loop
[2026-03-09 09:12:30] 2026-03-09 08:11:40,504 | INFO     | all data control threads have been joined
[2026-03-09 09:12:30] 2026-03-09 08:11:41,120 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:41,196 | INFO     | all payload control threads have been joined
[2026-03-09 09:12:30] 2026-03-09 08:11:41,432 | INFO     | all job control threads have been joined
[2026-03-09 09:12:30] 2026-03-09 08:11:41,447 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:41,509 | INFO     | [data] control thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:41,764 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:41,908 | INFO     | [job] validate thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,073 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,110 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,120 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,187 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,201 | INFO     | [payload] control thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,213 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,311 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,437 | INFO     | [job] control thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:42,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:12:30] 2026-03-09 08:11:43,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:12:30] 2026-03-09 08:11:43,659 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:47,019 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:11:50,215 | INFO     | job.realtimelogging is not enabled
[2026-03-09 09:12:30] 2026-03-09 08:11:51,219 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:12:30] 2026-03-09 08:12:10,394 | INFO     | PID=2340109 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 09:12:30] 2026-03-09 08:12:10,394 | INFO     | .. there are 47 such processes running
[2026-03-09 09:12:30] 2026-03-09 08:12:10,395 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:12:30] 2026-03-09 08:12:10,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:12:30] 2026-03-09 08:12:10,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:12:30] 2026-03-09 08:12:24,947 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:12:30] 2026-03-09 08:12:25,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23397881218880)>', '<ExcThread(monitor, started 23397566236416)>']
[2026-03-09 09:12:30] 2026-03-09 08:12:25,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:12:30] 2026-03-09 08:12:25,460 | INFO     | [monitor] control thread has ended
[2026-03-09 09:12:30] 2026-03-09 08:12:30,422 | INFO     | all workflow threads have been joined
[2026-03-09 09:12:30] 2026-03-09 08:12:30,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:12:30] 2026-03-09 08:12:30,422 | INFO     | traces error code: 0
[2026-03-09 09:12:30] 2026-03-09 08:12:30,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:12:30] 2026-03-09 08:12:30,570 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:12:30] 2026-03-09 08:12:30,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:12:30] 2026-03-09 08:12:30,575 [wrapper] pilotpid: 2340109
[2026-03-09 09:12:30] 2026-03-09 08:12:30,577 [wrapper] Pilot exit status: 0
[2026-03-09 09:12:30] 2026-03-09 08:12:30,584 [wrapper] pandaids: 7039083397
[2026-03-09 09:12:30] 2026-03-09 08:12:30,706 [wrapper] cleanup supervisor_pilot 3027018 2340110
[2026-03-09 09:12:30] 2026-03-09 08:12:30,708 [wrapper] Test setup, not cleaning
[2026-03-09 09:12:30] 2026-03-09 08:12:30,709 [wrapper] apfmon messages muted
[2026-03-09 09:12:30] 2026-03-09 08:12:30,710 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:12:30] 2026-03-09 08:12:30,712 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:12:30]  *** Error codes and diagnostics ***
[2026-03-09 09:12:30]     "exeErrorCode": 0,
[2026-03-09 09:12:30]     "exeErrorDiag": "",
[2026-03-09 09:12:30]     "pilotErrorCode": 0,
[2026-03-09 09:12:30]     "pilotErrorDiag": "",
[2026-03-09 09:12:30]  *** Listing of results directory ***
[2026-03-09 09:12:30] total 616564
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:18 pilot3.tar.gz
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:20 queuedata.json
[2026-03-09 09:12:30] -rwx------. 1 boinc boinc     36322 Mar  7 12:20 runpilot2-wrapper.sh
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc       100 Mar  9 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:12:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 07:54 run_atlas
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc       105 Mar  9 07:54 job.xml
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc      6707 Mar  9 07:55 init_data.xml
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc 441816067 Mar  9 07:55 EVNT.46701403._000323.pool.root.1
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:55 start_atlas.sh
[2026-03-09 09:12:30] drwxrwx--x. 2 boinc boinc      4096 Mar  9 07:55 shared
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc    597954 Mar  9 07:55 input.tar.gz
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc         0 Mar  9 07:55 boinc_lockfile
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc      2564 Mar  9 07:55 pandaJob.out
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc    999108 Mar  9 07:55 agis_schedconf.cvmfs.json
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc   1511578 Mar  9 07:55 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc       445 Mar  9 07:55 workernode_map.json
[2026-03-09 09:12:30] drwx------. 5 boinc boinc      4096 Mar  9 07:55 pilot3
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc 183660291 Mar  9 09:11 HITS.48955006._016150.pool.root.1
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc       530 Mar  9 09:11 boinc_task_state.xml
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc      1030 Mar  9 09:11 memory_monitor_summary.json
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc    304070 Mar  9 09:11 log.48955006._016150.job.log.tgz.1
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc      6354 Mar  9 09:11 heartbeat.json
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc        95 Mar  9 09:12 pilot_heartbeat.json
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc        27 Mar  9 09:12 wrapper_checkpoint.txt
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc      8192 Mar  9 09:12 boinc_mmap_file
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc      5088 Mar  9 09:12 pilotlog.txt
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc    675621 Mar  9 09:12 log.48955006._016150.job.log.1
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc       357 Mar  9 09:12 output.list
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc       620 Mar  9 09:12 runtime_log
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc    993280 Mar  9 09:12 result.tar.gz
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc      9221 Mar  9 09:12 runtime_log.err
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc       662 Mar  9 09:12 JAFODmSt4I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbfVLDmMPbSfn.diag
[2026-03-09 09:12:30] -rw-r--r--. 1 boinc boinc     21309 Mar  9 09:12 stderr.txt
[2026-03-09 09:12:30] HITS file was successfully produced:
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc 183660291 Mar  9 09:11 shared/HITS.pool.root.1
[2026-03-09 09:12:30]  *** Contents of shared directory: ***
[2026-03-09 09:12:30] total 612400
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc 441816067 Mar  9 07:55 ATLAS.root_0
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc     15845 Mar  9 07:55 start_atlas.sh
[2026-03-09 09:12:30] -rw-r--r--. 2 boinc boinc    597954 Mar  9 07:55 input.tar.gz
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc 183660291 Mar  9 09:11 HITS.pool.root.1
[2026-03-09 09:12:30] -rw-------. 1 boinc boinc    993280 Mar  9 09:12 result.tar.gz
09:12:32 (2326686): run_atlas exited; CPU time 17663.908045
09:12:32 (2326686): called boinc_finish(0)

</stderr_txt>
]]>

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