Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:07 (3044783): wrapper (7.7.26015): starting
17:06:07 (3044783): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 17:06:07] Arguments: --nthreads 4
[2026-03-08 17:06:07] Threads: 4
[2026-03-08 17:06:07] Checking for CVMFS
[2026-03-08 17:06:07] No cvmfs_config command found, will try listing directly
[2026-03-08 17:06:07] CVMFS is ok
[2026-03-08 17:06:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 17:06:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 17:06:07] Further information can be found at the LHC@home message board.
[2026-03-08 17:06:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 17:06:07] Checking for apptainer binary...
[2026-03-08 17:06:07] which: no apptainer in ((null))
[2026-03-08 17:06:07] apptainer is not installed, using version from CVMFS
[2026-03-08 17:06:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 17:06:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-08 17:06:07] apptainer works
[2026-03-08 17:06:07] Set ATHENA_PROC_NUMBER=4
[2026-03-08 17:06:07] Set ATHENA_CORE_NUMBER=4
[2026-03-08 17:06:07] Starting ATLAS job with PandaID=7039098868
[2026-03-08 17:06:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 18:27:33]  *** The last 200 lines of the pilot log: ***
[2026-03-08 18:27:33]  lfn=log.48955010._010799.job.log.tgz.1
[2026-03-08 18:27:33]  mtime=0
[2026-03-08 18:27:33]  protocol_id=None
[2026-03-08 18:27:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 18:27:33]  replicas=None
[2026-03-08 18:27:33]  scope=mc23_13p6TeV
[2026-03-08 18:27:33]  status=None
[2026-03-08 18:27:33]  status_code=0
[2026-03-08 18:27:33]  storage_token=
[2026-03-08 18:27:33]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039098868/log.48955010._010799.job.log.tgz.1
[2026-03-08 18:27:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/2f/log.48955010._010799.job.log.tgz.1
[2026-03-08 18:27:33]  workdir=None
[2026-03-08 18:27:33] ]
[2026-03-08 18:27:33] 2026-03-08 17:26:38,486 | INFO     | transferring file log.48955010._010799.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039098868/log.48955010._010799.job.log.tgz.1 to /var/lib/
[2026-03-08 18:27:33] 2026-03-08 17:26:38,486 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039098868/log.48955010._010799.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-08 18:27:33] 2026-03-08 17:26:38,501 | INFO     | adding to output.list: log.48955010._010799.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/2f/log.48955010._010799.job.log.tg
[2026-03-08 18:27:33] 2026-03-08 17:26:38,502 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 18:27:33] 2026-03-08 17:26:38,502 | INFO     | summary of transferred files:
[2026-03-08 18:27:33] 2026-03-08 17:26:38,502 | INFO     |  -- lfn=log.48955010._010799.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 18:27:33] 2026-03-08 17:26:38,502 | INFO     | stage-out finished correctly
[2026-03-08 18:27:33] 2026-03-08 17:26:38,935 | INFO     | PID=3049311 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 18:27:33] 2026-03-08 17:26:38,936 | INFO     | .. there are 48 such processes running
[2026-03-08 18:27:33] 2026-03-08 17:26:38,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 18:27:33] 2026-03-08 17:26:39,931 | INFO     | job 7039098868 has state=finished
[2026-03-08 18:27:33] 2026-03-08 17:26:39,931 | INFO     | preparing for final server update for job 7039098868 in state='finished'
[2026-03-08 18:27:33] 2026-03-08 17:26:39,931 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039098868/jobReport.json
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | INFO     | this job has now completed (state=finished)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | INFO     | log transfer has been attempted: DONE
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | INFO     | job 7039098868 has finished - writing final server update
[2026-03-08 18:27:33] 2026-03-08 17:26:39,933 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391459/.job.ad'
[2026-03-08 18:27:33] 2026-03-08 17:26:39,934 | INFO     | total number of processed events: 400 (read)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,936 | INFO     | time since job start (4820s) is within the limit (349056.0s)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,948 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039098868/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,948 | INFO     | extracted standard info from prmon json
[2026-03-08 18:27:33] 2026-03-08 17:26:39,948 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 18:27:33] 2026-03-08 17:26:39,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 18:27:33] 2026-03-08 17:26:39,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 18:27:33] 2026-03-08 17:26:39,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 18:27:33] 2026-03-08 17:26:39,949 | INFO     | fitting pss+swap vs Time
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | sum of square deviations: 115715658.0
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | sum of deviations: 829590972.0
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | mean x: 1772988471.5
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | mean y: 2321728.138888889
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | intersect: -12708622104.686909
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | chi2: 0.0001655533098467389
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | current memory leak: 7.17 B/s (using 72 data points, chi2=0.00)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | could have reported an average CPU frequency of 3575 MHz (6 samples)
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | ..............................
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . Timing measurements:
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . get job = 0 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . initial setup = 4 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . payload setup = 5 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . stage-in = 0 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . payload execution = 4798 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,950 | INFO     | . stage-out = 0 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,953 | INFO     | . log creation = 0 s
[2026-03-08 18:27:33] 2026-03-08 17:26:39,953 | INFO     | ..............................
[2026-03-08 18:27:33] 2026-03-08 17:26:40,468 | INFO     | 
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | job summary report
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | --------------------------------------------------
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | PanDA job id: 7039098868
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | task id: 48955010
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | errors: (none)
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | pilot state: finished 
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | transexitcode: 0
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | exeerrorcode: 0
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | exeerrordiag: 
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | exitcode: 0
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | exitmsg: OK
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | cpuconsumptiontime: 18279 s
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | nevents: 400
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | neventsw: 0
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | pid: 3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | pgrp: 3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | corecount: 4
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | event service: False
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | sizes: {0: 2295766, 11: 2295766, 4807: 2331074, 4808: 2331074, 4809: 2331268}
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | --------------------------------------------------
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | 
[2026-03-08 18:27:33] 2026-03-08 17:26:40,469 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | job 7039098868 has completed (purged errors)
[2026-03-08 18:27:33] 2026-03-08 17:26:40,486 | INFO     | overall cleanup function is called
[2026-03-08 18:27:33] 2026-03-08 17:26:41,492 | INFO     | --- collectZombieJob: --- 10, [3055106]
[2026-03-08 18:27:33] 2026-03-08 17:26:41,493 | INFO     | zombie collector waiting for pid 3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:41,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 18:27:33] 2026-03-08 17:26:41,493 | INFO     | collected zombie processes
[2026-03-08 18:27:33] 2026-03-08 17:26:41,493 | INFO     | will attempt to kill all subprocesses of pid=3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:41,992 | INFO     | process IDs to be killed: [3055106] (in reverse order)
[2026-03-08 18:27:33] 2026-03-08 17:26:42,226 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 18:27:33] 2026-03-08 17:26:42,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 18:27:33] 2026-03-08 17:26:42,258 | INFO     | did not find any defunct processes belonging to 3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:42,288 | INFO     | did not find any defunct processes belonging to 3055106
[2026-03-08 18:27:33] 2026-03-08 17:26:42,289 | INFO     | ready for new job
[2026-03-08 18:27:33] 2026-03-08 17:26:42,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 18:27:33] 2026-03-08 17:26:42,290 | INFO     | **************************************
[2026-03-08 18:27:33] 2026-03-08 17:26:42,290 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 18:27:33] 2026-03-08 17:26:42,290 | INFO     | **************************************
[2026-03-08 18:27:33] 2026-03-08 17:26:42,290 | INFO     | 
[2026-03-08 18:27:33] 2026-03-08 17:26:42,295 | INFO     | architecture information:
[2026-03-08 18:27:33] 2026-03-08 17:26:42,296 | INFO     | executing command: cat /etc/os-release
[2026-03-08 18:27:33] 2026-03-08 17:26:42,311 | INFO     | cat /etc/os-release:
[2026-03-08 18:27:33] NAME="CentOS Linux"
[2026-03-08 18:27:33] VERSION="7 (Core)"
[2026-03-08 18:27:33] ID="centos"
[2026-03-08 18:27:33] ID_LIKE="rhel fedora"
[2026-03-08 18:27:33] VERSION_ID="7"
[2026-03-08 18:27:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 18:27:33] ANSI_COLOR="0;31"
[2026-03-08 18:27:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 18:27:33] HOME_URL="https://www.centos.org/"
[2026-03-08 18:27:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 18:27:33] 
[2026-03-08 18:27:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 18:27:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 18:27:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 18:27:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 18:27:33] 
[2026-03-08 18:27:33] 2026-03-08 17:26:42,311 | INFO     | **************************************
[2026-03-08 18:27:33] 2026-03-08 17:26:42,814 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-08 18:27:33] 2026-03-08 17:26:42,827 | INFO     | sufficient remaining disk space (20989345792 B)
[2026-03-08 18:27:33] 2026-03-08 17:26:42,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 18:27:33] 2026-03-08 17:26:42,827 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 18:27:33] 2026-03-08 17:26:42,827 | INFO     | update_server=False
[2026-03-08 18:27:33] 2026-03-08 17:26:42,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 18:27:33] 2026-03-08 17:26:43,490 | INFO     | all data control threads have been joined
[2026-03-08 18:27:33] 2026-03-08 17:26:43,832 | INFO     | [job] retrieve thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:43,834 | INFO     | [payload] failed_post thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:43,987 | INFO     | all payload control threads have been joined
[2026-03-08 18:27:33] 2026-03-08 17:26:44,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 18:27:33] 2026-03-08 17:26:44,293 | WARNING  | process 3055106 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 18:27:33] 2026-03-08 17:26:44,391 | INFO     | all job control threads have been joined
[2026-03-08 18:27:33] 2026-03-08 17:26:44,449 | INFO     | [job] validate thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,496 | INFO     | [data] control thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,626 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 18:27:33] 2026-03-08 17:26:44,709 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,847 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,982 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 18:27:33] 2026-03-08 17:26:44,992 | INFO     | [payload] control thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:44,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 18:27:33] 2026-03-08 17:26:45,036 | INFO     | [data] copytool_in thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:45,098 | INFO     | number of running child processes to parent process 3055106: 1
[2026-03-08 18:27:33] 2026-03-08 17:26:45,098 | INFO     | maximum number of monitored processes: 6
[2026-03-08 18:27:33] 2026-03-08 17:26:45,098 | INFO     | aborting job monitoring since job object (job id=7039098868) has expired
[2026-03-08 18:27:33] 2026-03-08 17:26:45,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 18:27:33] 2026-03-08 17:26:45,098 | INFO     | will abort loop
[2026-03-08 18:27:33] 2026-03-08 17:26:45,379 | INFO     | [payload] validate_post thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:45,396 | INFO     | [job] control thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:46,000 | INFO     | [job] queue monitor thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:46,057 | INFO     | [data] copytool_out thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:46,104 | INFO     | [job] job monitor thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:48,996 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:26:53,307 | INFO     | job.realtimelogging is not enabled
[2026-03-08 18:27:33] 2026-03-08 17:26:54,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 18:27:33] 2026-03-08 17:27:13,571 | INFO     | PID=3049311 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 18:27:33] 2026-03-08 17:27:13,574 | INFO     | .. there are 48 such processes running
[2026-03-08 18:27:33] 2026-03-08 17:27:13,575 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 18:27:33] 2026-03-08 17:27:13,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 18:27:33] 2026-03-08 17:27:13,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 18:27:33] 2026-03-08 17:27:27,415 | INFO     | [monitor] cgroup control has ended
[2026-03-08 18:27:33] 2026-03-08 17:27:27,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23036045223744)>', '<ExcThread(monitor, started 23035804657408)>']
[2026-03-08 18:27:33] 2026-03-08 17:27:28,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 18:27:33] 2026-03-08 17:27:28,650 | INFO     | [monitor] control thread has ended
[2026-03-08 18:27:33] 2026-03-08 17:27:32,997 | INFO     | all workflow threads have been joined
[2026-03-08 18:27:33] 2026-03-08 17:27:32,998 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 18:27:33] 2026-03-08 17:27:32,998 | INFO     | traces error code: 0
[2026-03-08 18:27:33] 2026-03-08 17:27:32,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 18:27:33] 2026-03-08 17:27:33,148 [wrapper] ==== pilot stdout END ====
[2026-03-08 18:27:33] 2026-03-08 17:27:33,151 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 18:27:33] 2026-03-08 17:27:33,154 [wrapper] pilotpid: 3049311
[2026-03-08 18:27:33] 2026-03-08 17:27:33,156 [wrapper] Pilot exit status: 0
[2026-03-08 18:27:33] 2026-03-08 17:27:33,164 [wrapper] pandaids: 7039098868
[2026-03-08 18:27:33] 2026-03-08 17:27:33,300 [wrapper] cleanup supervisor_pilot 3672400 3049312
[2026-03-08 18:27:33] 2026-03-08 17:27:33,303 [wrapper] Test setup, not cleaning
[2026-03-08 18:27:33] 2026-03-08 17:27:33,305 [wrapper] apfmon messages muted
[2026-03-08 18:27:33] 2026-03-08 17:27:33,308 [wrapper] ==== wrapper stdout END ====
[2026-03-08 18:27:33] 2026-03-08 17:27:33,310 [wrapper] ==== wrapper stderr END ====
[2026-03-08 18:27:33]  *** Error codes and diagnostics ***
[2026-03-08 18:27:33]     "exeErrorCode": 0,
[2026-03-08 18:27:33]     "exeErrorDiag": "",
[2026-03-08 18:27:33]     "pilotErrorCode": 0,
[2026-03-08 18:27:33]     "pilotErrorDiag": "",
[2026-03-08 18:27:33]  *** Listing of results directory ***
[2026-03-08 18:27:33] total 617492
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:17 queuedata.json
[2026-03-08 18:27:33] -rwx------. 1 boinc boinc     36322 Mar  7 12:17 runpilot2-wrapper.sh
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:18 pilot3.tar.gz
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc       100 Mar  8 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 18:27:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 17:06 run_atlas
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc       105 Mar  8 17:06 job.xml
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc 446694915 Mar  8 17:06 EVNT.46701403._001216.pool.root.1
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc      6708 Mar  8 17:06 init_data.xml
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:06 start_atlas.sh
[2026-03-08 18:27:33] drwxrwx--x. 2 boinc boinc      4096 Mar  8 17:06 shared
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc    597954 Mar  8 17:06 input.tar.gz
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc         0 Mar  8 17:06 boinc_lockfile
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc      2563 Mar  8 17:06 pandaJob.out
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc    999212 Mar  8 17:06 agis_schedconf.cvmfs.json
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc   1521291 Mar  8 17:06 agis_ddmendpoints.agis.ALL.json
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc       445 Mar  8 17:06 workernode_map.json
[2026-03-08 18:27:33] drwx------. 5 boinc boinc      4096 Mar  8 17:06 pilot3
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc 179664136 Mar  8 18:26 HITS.48955010._010799.pool.root.1
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc       530 Mar  8 18:26 boinc_task_state.xml
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc      1031 Mar  8 18:26 memory_monitor_summary.json
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc    302635 Mar  8 18:26 log.48955010._010799.job.log.tgz.1
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc      6360 Mar  8 18:26 heartbeat.json
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc        95 Mar  8 18:27 pilot_heartbeat.json
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc      8192 Mar  8 18:27 boinc_mmap_file
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc        27 Mar  8 18:27 wrapper_checkpoint.txt
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc      5435 Mar  8 18:27 pilotlog.txt
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc    706702 Mar  8 18:27 log.48955010._010799.job.log.1
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc       357 Mar  8 18:27 output.list
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc       620 Mar  8 18:27 runtime_log
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc   1024000 Mar  8 18:27 result.tar.gz
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc       663 Mar  8 18:27 FvcMDmMq4I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlPTLDm6py3fn.diag
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc      9221 Mar  8 18:27 runtime_log.err
[2026-03-08 18:27:33] -rw-r--r--. 1 boinc boinc     20539 Mar  8 18:27 stderr.txt
[2026-03-08 18:27:33] HITS file was successfully produced:
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc 179664136 Mar  8 18:26 shared/HITS.pool.root.1
[2026-03-08 18:27:33]  *** Contents of shared directory: ***
[2026-03-08 18:27:33] total 613292
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc 446694915 Mar  8 17:06 ATLAS.root_0
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:06 start_atlas.sh
[2026-03-08 18:27:33] -rw-r--r--. 2 boinc boinc    597954 Mar  8 17:06 input.tar.gz
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc 179664136 Mar  8 18:26 HITS.pool.root.1
[2026-03-08 18:27:33] -rw-------. 1 boinc boinc   1024000 Mar  8 18:27 result.tar.gz
18:27:34 (3044783): run_atlas exited; CPU time 18478.472005
18:27:34 (3044783): called boinc_finish(0)

</stderr_txt>
]]>

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