Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:52:20 (2107001): wrapper (7.7.26015): starting
17:52:20 (2107001): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:52:20] Arguments: --nthreads 4
[2026-03-07 17:52:20] Threads: 4
[2026-03-07 17:52:20] Checking for CVMFS
[2026-03-07 17:52:20] No cvmfs_config command found, will try listing directly
[2026-03-07 17:52:20] CVMFS is ok
[2026-03-07 17:52:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:52:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 17:52:20] Further information can be found at the LHC@home message board.
[2026-03-07 17:52:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:52:20] Checking for apptainer binary...
[2026-03-07 17:52:20] which: no apptainer in ((null))
[2026-03-07 17:52:20] apptainer is not installed, using version from CVMFS
[2026-03-07 17:52:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:52:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 17:52:21] apptainer works
[2026-03-07 17:52:21] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:52:21] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:52:21] Starting ATLAS job with PandaID=7039098916
[2026-03-07 17:52:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 19:10:45]  *** The last 200 lines of the pilot log: ***
[2026-03-07 19:10:45]  lfn=log.48955010._010847.job.log.tgz.1
[2026-03-07 19:10:45]  mtime=0
[2026-03-07 19:10:45]  protocol_id=None
[2026-03-07 19:10:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 19:10:45]  replicas=None
[2026-03-07 19:10:45]  scope=mc23_13p6TeV
[2026-03-07 19:10:45]  status=None
[2026-03-07 19:10:45]  status_code=0
[2026-03-07 19:10:45]  storage_token=
[2026-03-07 19:10:45]  surl=/var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039098916/log.48955010._010847.job.log.tgz.1
[2026-03-07 19:10:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/29/log.48955010._010847.job.log.tgz.1
[2026-03-07 19:10:45]  workdir=None
[2026-03-07 19:10:45] ]
[2026-03-07 19:10:45] 2026-03-07 18:09:51,324 | INFO     | transferring file log.48955010._010847.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039098916/log.48955010._010847.job.log.tgz.1 to /var/lib/b
[2026-03-07 19:10:45] 2026-03-07 18:09:51,324 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039098916/log.48955010._010847.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/8/lo
[2026-03-07 19:10:45] 2026-03-07 18:09:51,343 | INFO     | adding to output.list: log.48955010._010847.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/29/log.48955010._010847.job.log.tg
[2026-03-07 19:10:45] 2026-03-07 18:09:51,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 19:10:45] 2026-03-07 18:09:51,344 | INFO     | summary of transferred files:
[2026-03-07 19:10:45] 2026-03-07 18:09:51,344 | INFO     |  -- lfn=log.48955010._010847.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 19:10:45] 2026-03-07 18:09:51,344 | INFO     | stage-out finished correctly
[2026-03-07 19:10:45] 2026-03-07 18:09:51,775 | INFO     | PID=2112261 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 19:10:45] 2026-03-07 18:09:51,775 | INFO     | .. there are 53 such processes running
[2026-03-07 19:10:45] 2026-03-07 18:09:52,775 | INFO     | time since job start (4640s) is within the limit (349056.0s)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,417 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 19:10:45] 2026-03-07 18:09:54,781 | INFO     | time since job start (4642s) is within the limit (349056.0s)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,799 | INFO     | job 7039098916 has state=finished
[2026-03-07 19:10:45] 2026-03-07 18:09:54,799 | INFO     | preparing for final server update for job 7039098916 in state='finished'
[2026-03-07 19:10:45] 2026-03-07 18:09:54,799 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039098916/jobReport.json
[2026-03-07 19:10:45] 2026-03-07 18:09:54,801 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/8/workernode_map.json
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | INFO     | this job has now completed (state=finished)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | INFO     | log transfer has been attempted: DONE
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | INFO     | job 7039098916 has finished - writing final server update
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_82252/.job.ad'
[2026-03-07 19:10:45] 2026-03-07 18:09:54,802 | INFO     | total number of processed events: 400 (read)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,820 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7039098916/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,820 | INFO     | extracted standard info from prmon json
[2026-03-07 19:10:45] 2026-03-07 18:09:54,820 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 19:10:45] 2026-03-07 18:09:54,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 19:10:45] 2026-03-07 18:09:54,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 19:10:45] 2026-03-07 18:09:54,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | fitting pss+swap vs Time
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | sum of square deviations: 101843770.0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | sum of deviations: 334803685.0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | mean x: 1772904752.0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | mean y: 2325398.0434782607
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | intersect: -5825964777.424409
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | chi2: 0.0003340647698105281
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | current memory leak: 3.29 B/s (using 69 data points, chi2=0.00)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,822 | INFO     | could have reported an average CPU frequency of 3606 MHz (6 samples)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | ..............................
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . Timing measurements:
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . get job = 0 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . initial setup = 4 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . payload setup = 4 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . stage-in = 0 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . payload execution = 4618 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . stage-out = 0 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | . log creation = 0 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,823 | INFO     | ..............................
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | 
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | job summary report
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | --------------------------------------------------
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | PanDA job id: 7039098916
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | task id: 48955010
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | errors: (none)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | pilot state: finished 
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | transexitcode: 0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | exeerrorcode: 0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | exeerrordiag: 
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | exitcode: 0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | exitmsg: OK
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | cpuconsumptiontime: 17748 s
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | nevents: 400
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | neventsw: 0
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | pid: 2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | pgrp: 2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | corecount: 4
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | event service: False
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | sizes: {0: 2295765, 10: 2295765, 4627: 2321994, 4628: 2331014, 4631: 2331070, 4632: 2331264}
[2026-03-07 19:10:45] 2026-03-07 18:09:54,872 | INFO     | --------------------------------------------------
[2026-03-07 19:10:45] 2026-03-07 18:09:54,873 | INFO     | 
[2026-03-07 19:10:45] 2026-03-07 18:09:54,873 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/8
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | job 7039098916 has completed (purged errors)
[2026-03-07 19:10:45] 2026-03-07 18:09:54,892 | INFO     | overall cleanup function is called
[2026-03-07 19:10:45] 2026-03-07 18:09:55,483 | WARNING  | process 2118267 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 19:10:45] 2026-03-07 18:09:55,777 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 19:10:45] 2026-03-07 18:09:55,899 | INFO     | --- collectZombieJob: --- 10, [2118267]
[2026-03-07 19:10:45] 2026-03-07 18:09:55,899 | INFO     | zombie collector waiting for pid 2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:55,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 19:10:45] 2026-03-07 18:09:55,899 | INFO     | collected zombie processes
[2026-03-07 19:10:45] 2026-03-07 18:09:55,899 | INFO     | will attempt to kill all subprocesses of pid=2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:56,941 | INFO     | number of running child processes to parent process 2118267: 1
[2026-03-07 19:10:45] 2026-03-07 18:09:56,942 | INFO     | maximum number of monitored processes: 6
[2026-03-07 19:10:45] 2026-03-07 18:09:56,942 | INFO     | aborting job monitoring since job object (job id=7039098916) has expired
[2026-03-07 19:10:45] 2026-03-07 18:09:57,044 | INFO     | process IDs to be killed: [2118267] (in reverse order)
[2026-03-07 19:10:45] 2026-03-07 18:09:57,236 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 19:10:45] 2026-03-07 18:09:57,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 19:10:45] 2026-03-07 18:09:57,262 | INFO     | did not find any defunct processes belonging to 2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:57,285 | INFO     | did not find any defunct processes belonging to 2118267
[2026-03-07 19:10:45] 2026-03-07 18:09:57,285 | INFO     | ready for new job
[2026-03-07 19:10:45] 2026-03-07 18:09:57,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 19:10:45] 2026-03-07 18:09:57,287 | INFO     | **************************************
[2026-03-07 19:10:45] 2026-03-07 18:09:57,289 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 19:10:45] 2026-03-07 18:09:57,289 | INFO     | **************************************
[2026-03-07 19:10:45] 2026-03-07 18:09:57,289 | INFO     | 
[2026-03-07 19:10:45] 2026-03-07 18:09:57,295 | INFO     | architecture information:
[2026-03-07 19:10:45] 2026-03-07 18:09:57,295 | INFO     | executing command: cat /etc/os-release
[2026-03-07 19:10:45] 2026-03-07 18:09:57,310 | INFO     | cat /etc/os-release:
[2026-03-07 19:10:45] NAME="CentOS Linux"
[2026-03-07 19:10:45] VERSION="7 (Core)"
[2026-03-07 19:10:45] ID="centos"
[2026-03-07 19:10:45] ID_LIKE="rhel fedora"
[2026-03-07 19:10:45] VERSION_ID="7"
[2026-03-07 19:10:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 19:10:45] ANSI_COLOR="0;31"
[2026-03-07 19:10:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 19:10:45] HOME_URL="https://www.centos.org/"
[2026-03-07 19:10:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 19:10:45] 
[2026-03-07 19:10:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 19:10:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 19:10:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 19:10:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 19:10:45] 
[2026-03-07 19:10:45] 2026-03-07 18:09:57,311 | INFO     | **************************************
[2026-03-07 19:10:45] 2026-03-07 18:09:57,813 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/8
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | INFO     | sufficient remaining disk space (21052260352 B)
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | INFO     | update_server=False
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 19:10:45] 2026-03-07 18:09:57,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 19:10:45] 2026-03-07 18:09:57,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:10:45] 2026-03-07 18:09:57,831 | INFO     | will abort loop
[2026-03-07 19:10:45] 2026-03-07 18:09:58,821 | INFO     | all data control threads have been joined
[2026-03-07 19:10:45] 2026-03-07 18:09:58,834 | INFO     | [job] retrieve thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:58,836 | INFO     | [job] job monitor thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:58,904 | INFO     | all payload control threads have been joined
[2026-03-07 19:10:45] 2026-03-07 18:09:59,071 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,251 | INFO     | all job control threads have been joined
[2026-03-07 19:10:45] 2026-03-07 18:09:59,283 | INFO     | [payload] failed_post thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,515 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,594 | INFO     | [job] validate thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,753 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,783 | INFO     | [payload] validate_post thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,825 | INFO     | [data] control thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,836 | INFO     | [data] copytool_out thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 19:10:45] 2026-03-07 18:09:59,909 | INFO     | [payload] control thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:09:59,961 | INFO     | [data] copytool_in thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:10:00,256 | INFO     | [job] control thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:10:00,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 19:10:45] 2026-03-07 18:10:00,882 | INFO     | [job] queue monitor thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:10:04,476 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 19:10:45] 2026-03-07 18:10:28,412 | INFO     | PID=2112261 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 19:10:45] 2026-03-07 18:10:28,412 | INFO     | .. there are 53 such processes running
[2026-03-07 19:10:45] 2026-03-07 18:10:28,412 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 19:10:45] 2026-03-07 18:10:28,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 19:10:45] 2026-03-07 18:10:28,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 19:10:45] 2026-03-07 18:10:39,904 | INFO     | [monitor] cgroup control has ended
[2026-03-07 19:10:45] 2026-03-07 18:10:40,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23299249227584)>', '<ExcThread(monitor, started 23299011917568)>']
[2026-03-07 19:10:45] 2026-03-07 18:10:40,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 19:10:45] 2026-03-07 18:10:40,471 | INFO     | [monitor] control thread has ended
[2026-03-07 19:10:45] 2026-03-07 18:10:45,332 | INFO     | all workflow threads have been joined
[2026-03-07 19:10:45] 2026-03-07 18:10:45,332 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 19:10:45] 2026-03-07 18:10:45,332 | INFO     | traces error code: 0
[2026-03-07 19:10:45] 2026-03-07 18:10:45,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 19:10:45] 2026-03-07 18:10:45,466 [wrapper] ==== pilot stdout END ====
[2026-03-07 19:10:45] 2026-03-07 18:10:45,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 19:10:45] 2026-03-07 18:10:45,471 [wrapper] pilotpid: 2112261
[2026-03-07 19:10:45] 2026-03-07 18:10:45,473 [wrapper] Pilot exit status: 0
[2026-03-07 19:10:45] 2026-03-07 18:10:45,482 [wrapper] pandaids: 7039098916
[2026-03-07 19:10:45] 2026-03-07 18:10:45,596 [wrapper] cleanup supervisor_pilot 2858509 2112262
[2026-03-07 19:10:45] 2026-03-07 18:10:45,599 [wrapper] Test setup, not cleaning
[2026-03-07 19:10:45] 2026-03-07 18:10:45,601 [wrapper] apfmon messages muted
[2026-03-07 19:10:45] 2026-03-07 18:10:45,604 [wrapper] ==== wrapper stdout END ====
[2026-03-07 19:10:45] 2026-03-07 18:10:45,606 [wrapper] ==== wrapper stderr END ====
[2026-03-07 19:10:45]  *** Error codes and diagnostics ***
[2026-03-07 19:10:45]     "exeErrorCode": 0,
[2026-03-07 19:10:45]     "exeErrorDiag": "",
[2026-03-07 19:10:45]     "pilotErrorCode": 0,
[2026-03-07 19:10:45]     "pilotErrorDiag": "",
[2026-03-07 19:10:45]  *** Listing of results directory ***
[2026-03-07 19:10:45] total 628828
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:17 queuedata.json
[2026-03-07 19:10:45] -rwx------. 1 boinc boinc     36322 Mar  7 12:17 runpilot2-wrapper.sh
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:18 pilot3.tar.gz
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc       100 Mar  7 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 19:10:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 17:52 run_atlas
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc       105 Mar  7 17:52 job.xml
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc 446878019 Mar  7 17:52 EVNT.46701403._001217.pool.root.1
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc    597959 Mar  7 17:52 input.tar.gz
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc      6703 Mar  7 17:52 init_data.xml
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:52 start_atlas.sh
[2026-03-07 19:10:45] drwxrwx--x. 2 boinc boinc      4096 Mar  7 17:52 shared
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc         0 Mar  7 17:52 boinc_lockfile
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc      2563 Mar  7 17:52 pandaJob.out
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc    999185 Mar  7 17:52 agis_schedconf.cvmfs.json
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc   1521291 Mar  7 17:52 agis_ddmendpoints.agis.ALL.json
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc       443 Mar  7 17:52 workernode_map.json
[2026-03-07 19:10:45] drwx------. 5 boinc boinc      4096 Mar  7 17:52 pilot3
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc       531 Mar  7 19:09 boinc_task_state.xml
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc 191131119 Mar  7 19:09 HITS.48955010._010847.pool.root.1
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc      1030 Mar  7 19:09 memory_monitor_summary.json
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc    300008 Mar  7 19:09 log.48955010._010847.job.log.tgz.1
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc      6353 Mar  7 19:09 heartbeat.json
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc      8192 Mar  7 19:10 boinc_mmap_file
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc        27 Mar  7 19:10 wrapper_checkpoint.txt
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc        95 Mar  7 19:10 pilot_heartbeat.json
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc      4831 Mar  7 19:10 pilotlog.txt
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc    685255 Mar  7 19:10 log.48955010._010847.job.log.1
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc       357 Mar  7 19:10 output.list
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc       620 Mar  7 19:10 runtime_log
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc   1003520 Mar  7 19:10 result.tar.gz
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc      9204 Mar  7 19:10 runtime_log.err
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc       662 Mar  7 19:10 PNTMDmOq4I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmydVLDmTb5I2n.diag
[2026-03-07 19:10:45] -rw-r--r--. 1 boinc boinc     21617 Mar  7 19:10 stderr.txt
[2026-03-07 19:10:45] HITS file was successfully produced:
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc 191131119 Mar  7 19:09 shared/HITS.pool.root.1
[2026-03-07 19:10:45]  *** Contents of shared directory: ***
[2026-03-07 19:10:45] total 624648
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc 446878019 Mar  7 17:52 ATLAS.root_0
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc    597959 Mar  7 17:52 input.tar.gz
[2026-03-07 19:10:45] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:52 start_atlas.sh
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc 191131119 Mar  7 19:09 HITS.pool.root.1
[2026-03-07 19:10:45] -rw-------. 1 boinc boinc   1003520 Mar  7 19:10 result.tar.gz
19:10:47 (2107001): run_atlas exited; CPU time 17927.120978
19:10:47 (2107001): called boinc_finish(0)

</stderr_txt>
]]>

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