Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:37:58 (1844691): wrapper (7.7.26015): starting
05:37:58 (1844691): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 05:37:58] Arguments: --nthreads 4
[2026-03-08 05:37:58] Threads: 4
[2026-03-08 05:37:58] Checking for CVMFS
[2026-03-08 05:37:58] No cvmfs_config command found, will try listing directly
[2026-03-08 05:37:58] CVMFS is ok
[2026-03-08 05:37:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 05:37:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 05:37:58] Further information can be found at the LHC@home message board.
[2026-03-08 05:37:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 05:37:58] Checking for apptainer binary...
[2026-03-08 05:37:58] which: no apptainer in ((null))
[2026-03-08 05:37:58] apptainer is not installed, using version from CVMFS
[2026-03-08 05:37:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 05:37:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-08 05:37:58] apptainer works
[2026-03-08 05:37:58] Set ATHENA_PROC_NUMBER=4
[2026-03-08 05:37:58] Set ATHENA_CORE_NUMBER=4
[2026-03-08 05:37:59] Starting ATLAS job with PandaID=7044938221
[2026-03-08 05:37:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 08:30:25]  *** The last 200 lines of the pilot log: ***
[2026-03-08 08:30:25] 2026-03-08 07:29:39,654 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 08:30:25] 2026-03-08 07:29:39,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 08:30:25] 2026-03-08 07:29:39,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 08:30:25] 2026-03-08 07:29:39,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 08:30:25] 2026-03-08 07:29:39,657 | INFO     | fitting pss+swap vs Time
[2026-03-08 08:30:25] 2026-03-08 07:29:39,658 | INFO     | sum of square deviations: 1444149868.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,659 | INFO     | sum of deviations: 23029875096.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,659 | INFO     | mean x: 1772949854.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,659 | INFO     | mean y: 2312259.3113772455
[2026-03-08 08:30:25] 2026-03-08 07:29:39,659 | INFO     | intersect: -28270940118.323044
[2026-03-08 08:30:25] 2026-03-08 07:29:39,659 | INFO     | chi2: 1.4633409356386706
[2026-03-08 08:30:25] 2026-03-08 07:29:39,660 | INFO     | sum of square deviations: 1318277740.5
[2026-03-08 08:30:25] 2026-03-08 07:29:39,661 | INFO     | sum of deviations: 22254030156.499996
[2026-03-08 08:30:25] 2026-03-08 07:29:39,661 | INFO     | mean x: 1772949701.5
[2026-03-08 08:30:25] 2026-03-08 07:29:39,661 | INFO     | mean y: 2311319.0432098764
[2026-03-08 08:30:25] 2026-03-08 07:29:39,661 | INFO     | intersect: -29927099541.04911
[2026-03-08 08:30:25] 2026-03-08 07:29:39,661 | INFO     | chi2: 1.4645315601619386
[2026-03-08 08:30:25] 2026-03-08 07:29:39,664 | INFO     | current chi2=1.4645315601619386 (change=-0.08136343993878425 %)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,665 | INFO     | right removable region: 161
[2026-03-08 08:30:25] 2026-03-08 07:29:39,665 | INFO     | sum of square deviations: 1318277740.5
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | sum of deviations: -534328310.4999997
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | mean x: 1772950006.5
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | mean y: 2340412.858024691
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | intersect: 720957857.7788498
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | chi2: 0.010569713941456046
[2026-03-08 08:30:25] 2026-03-08 07:29:39,666 | INFO     | current chi2=0.010569713941456046 (change=99.27769983849711 %)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,667 | INFO     | sum of square deviations: 1199940638.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | sum of deviations: -1598901012.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | mean x: 1772950159.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | mean y: 2341753.0700636944
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | intersect: 2364768454.5904937
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | chi2: 0.004695436292142792
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | current chi2=0.004695436292142792 (change=55.57650549343093 %)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,668 | INFO     | sum of square deviations: 1088905998.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,669 | INFO     | sum of deviations: -983250154.9999996
[2026-03-08 08:30:25] 2026-03-08 07:29:39,669 | INFO     | mean x: 1772950311.5
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | mean y: 2340902.6447368423
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | intersect: 1603262994.9020271
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | chi2: 0.0042442452477039335
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | current chi2=0.0042442452477039335 (change=9.609139947098596 %)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | left removable region: 30
[2026-03-08 08:30:25] 2026-03-08 07:29:39,670 | INFO     | sum of square deviations: 697054930.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,671 | INFO     | sum of deviations: 1146947375.9999998
[2026-03-08 08:30:25] 2026-03-08 07:29:39,671 | INFO     | mean x: 1772950586.0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,671 | INFO     | mean y: 2337158.1603053436
[2026-03-08 08:30:25] 2026-03-08 07:29:39,671 | INFO     | intersect: -2914909295.2725134
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | chi2: 7.634640322349892e-05
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | current memory leak: 1.65 B/s (using 131 data points, chi2=0.00)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | could have reported an average CPU frequency of 2671 MHz (9 samples)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | ..............................
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | . Timing measurements:
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | . get job = 0 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,672 | INFO     | . initial setup = 22 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | . payload setup = 23 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | . stage-in = 0 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | . payload execution = 10206 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | . stage-out = 1 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | . log creation = 0 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,673 | INFO     | ..............................
[2026-03-08 08:30:25] 2026-03-08 07:29:39,780 | INFO     | 
[2026-03-08 08:30:25] 2026-03-08 07:29:39,780 | INFO     | job summary report
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | --------------------------------------------------
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | PanDA job id: 7044938221
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | task id: 48958610
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | errors: (none)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | pilot state: finished 
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | transexitcode: 0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | exeerrorcode: 0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | exeerrordiag: 
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | exitcode: 0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,781 | INFO     | exitmsg: OK
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | cpuconsumptiontime: 36796 s
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | nevents: 400
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | neventsw: 0
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | pid: 1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | pgrp: 1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | corecount: 4
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | event service: False
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | sizes: {0: 2294668, 1: 2295737, 2: 2295825, 10233: 2324756, 10234: 2333776, 10235: 2333832, 10236: 2334218}
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | --------------------------------------------------
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | 
[2026-03-08 08:30:25] 2026-03-08 07:29:39,782 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-03-08 08:30:25] 2026-03-08 07:29:39,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,832 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,832 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | job 7044938221 has completed (purged errors)
[2026-03-08 08:30:25] 2026-03-08 07:29:39,834 | INFO     | overall cleanup function is called
[2026-03-08 08:30:25] 2026-03-08 07:29:40,843 | INFO     | --- collectZombieJob: --- 10, [1854637]
[2026-03-08 08:30:25] 2026-03-08 07:29:40,844 | INFO     | zombie collector waiting for pid 1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:40,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 08:30:25] 2026-03-08 07:29:40,844 | INFO     | collected zombie processes
[2026-03-08 08:30:25] 2026-03-08 07:29:40,844 | INFO     | will attempt to kill all subprocesses of pid=1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:41,791 | INFO     | process IDs to be killed: [1854637] (in reverse order)
[2026-03-08 08:30:25] 2026-03-08 07:29:42,205 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 08:30:25] 2026-03-08 07:29:42,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 08:30:25] 2026-03-08 07:29:42,247 | INFO     | did not find any defunct processes belonging to 1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:42,283 | INFO     | did not find any defunct processes belonging to 1854637
[2026-03-08 08:30:25] 2026-03-08 07:29:42,283 | INFO     | ready for new job
[2026-03-08 08:30:25] 2026-03-08 07:29:42,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 08:30:25] 2026-03-08 07:29:42,286 | INFO     | **************************************
[2026-03-08 08:30:25] 2026-03-08 07:29:42,286 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 08:30:25] 2026-03-08 07:29:42,286 | INFO     | **************************************
[2026-03-08 08:30:25] 2026-03-08 07:29:42,286 | INFO     | 
[2026-03-08 08:30:25] 2026-03-08 07:29:42,294 | INFO     | architecture information:
[2026-03-08 08:30:25] 2026-03-08 07:29:42,299 | INFO     | executing command: cat /etc/os-release
[2026-03-08 08:30:25] 2026-03-08 07:29:42,328 | INFO     | cat /etc/os-release:
[2026-03-08 08:30:25] NAME="CentOS Linux"
[2026-03-08 08:30:25] VERSION="7 (Core)"
[2026-03-08 08:30:25] ID="centos"
[2026-03-08 08:30:25] ID_LIKE="rhel fedora"
[2026-03-08 08:30:25] VERSION_ID="7"
[2026-03-08 08:30:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 08:30:25] ANSI_COLOR="0;31"
[2026-03-08 08:30:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 08:30:25] HOME_URL="https://www.centos.org/"
[2026-03-08 08:30:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 08:30:25] 
[2026-03-08 08:30:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 08:30:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 08:30:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 08:30:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 08:30:25] 
[2026-03-08 08:30:25] 2026-03-08 07:29:42,328 | INFO     | **************************************
[2026-03-08 08:30:25] 2026-03-08 07:29:42,831 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-03-08 08:30:25] 2026-03-08 07:29:42,859 | INFO     | sufficient remaining disk space (59469987840 B)
[2026-03-08 08:30:25] 2026-03-08 07:29:42,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 08:30:25] 2026-03-08 07:29:42,859 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 08:30:25] 2026-03-08 07:29:42,860 | INFO     | update_server=False
[2026-03-08 08:30:25] 2026-03-08 07:29:42,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 08:30:25] 2026-03-08 07:29:43,266 | INFO     | all job control threads have been joined
[2026-03-08 08:30:25] 2026-03-08 07:29:43,865 | INFO     | [job] retrieve thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:43,918 | INFO     | all data control threads have been joined
[2026-03-08 08:30:25] 2026-03-08 07:29:43,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 08:30:25] 2026-03-08 07:29:44,046 | INFO     | [job] validate thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,086 | INFO     | [payload] failed_post thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,190 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,245 | INFO     | all payload control threads have been joined
[2026-03-08 08:30:25] 2026-03-08 07:29:44,272 | INFO     | [job] control thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,540 | WARNING  | process 1854637 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 08:30:25] 2026-03-08 07:29:44,641 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,641 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 08:30:25] 2026-03-08 07:29:44,698 | INFO     | [payload] validate_post thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:30:25] 2026-03-08 07:29:44,804 | INFO     | [data] copytool_in thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:44,928 | INFO     | [data] control thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:45,177 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 08:30:25] 2026-03-08 07:29:45,251 | INFO     | [payload] control thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:45,796 | INFO     | [job] queue monitor thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:45,975 | INFO     | [data] copytool_out thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:46,086 | INFO     | number of running child processes to parent process 1854637: 1
[2026-03-08 08:30:25] 2026-03-08 07:29:46,086 | INFO     | maximum number of monitored processes: 6
[2026-03-08 08:30:25] 2026-03-08 07:29:46,087 | INFO     | aborting job monitoring since job object (job id=7044938221) has expired
[2026-03-08 08:30:25] 2026-03-08 07:29:46,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 08:30:25] 2026-03-08 07:29:46,087 | INFO     | will abort loop
[2026-03-08 08:30:25] 2026-03-08 07:29:47,092 | INFO     | [job] job monitor thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:48,673 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:29:53,886 | INFO     | job.realtimelogging is not enabled
[2026-03-08 08:30:25] 2026-03-08 07:29:54,890 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 08:30:25] 2026-03-08 07:30:13,224 | INFO     | PID=1849258 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 08:30:25] 2026-03-08 07:30:13,225 | INFO     | .. there are 27 such processes running
[2026-03-08 08:30:25] 2026-03-08 07:30:13,225 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 08:30:25] 2026-03-08 07:30:13,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 08:30:25] 2026-03-08 07:30:13,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 08:30:25] 2026-03-08 07:30:19,081 | INFO     | [monitor] cgroup control has ended
[2026-03-08 08:30:25] 2026-03-08 07:30:19,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22428022351680)>', '<ExcThread(monitor, started 22427698427648)>']
[2026-03-08 08:30:25] 2026-03-08 07:30:20,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 08:30:25] 2026-03-08 07:30:20,262 | INFO     | [monitor] control thread has ended
[2026-03-08 08:30:25] 2026-03-08 07:30:24,417 | INFO     | all workflow threads have been joined
[2026-03-08 08:30:25] 2026-03-08 07:30:24,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 08:30:25] 2026-03-08 07:30:24,418 | INFO     | traces error code: 0
[2026-03-08 08:30:25] 2026-03-08 07:30:24,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 08:30:25] 2026-03-08 07:30:24,571 [wrapper] ==== pilot stdout END ====
[2026-03-08 08:30:25] 2026-03-08 07:30:24,602 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 08:30:25] 2026-03-08 07:30:24,609 [wrapper] pilotpid: 1849258
[2026-03-08 08:30:25] 2026-03-08 07:30:24,615 [wrapper] Pilot exit status: 0
[2026-03-08 08:30:25] 2026-03-08 07:30:24,673 [wrapper] pandaids: 7044938221
[2026-03-08 08:30:25] 2026-03-08 07:30:24,888 [wrapper] cleanup supervisor_pilot 2275008 1849259
[2026-03-08 08:30:25] 2026-03-08 07:30:24,893 [wrapper] Test setup, not cleaning
[2026-03-08 08:30:25] 2026-03-08 07:30:24,897 [wrapper] apfmon messages muted
[2026-03-08 08:30:25] 2026-03-08 07:30:24,901 [wrapper] ==== wrapper stdout END ====
[2026-03-08 08:30:25] 2026-03-08 07:30:24,904 [wrapper] ==== wrapper stderr END ====
[2026-03-08 08:30:25]  *** Error codes and diagnostics ***
[2026-03-08 08:30:25]     "exeErrorCode": 0,
[2026-03-08 08:30:25]     "exeErrorDiag": "",
[2026-03-08 08:30:25]     "pilotErrorCode": 0,
[2026-03-08 08:30:25]     "pilotErrorDiag": "",
[2026-03-08 08:30:25]  *** Listing of results directory ***
[2026-03-08 08:30:25] total 430360
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:17 queuedata.json
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:17 pilot3.tar.gz
[2026-03-08 08:30:25] -rwx------. 1 boinc boinc     36322 Mar  7 12:17 runpilot2-wrapper.sh
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc       100 Mar  8 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 08:30:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 05:37 run_atlas
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc       105 Mar  8 05:37 job.xml
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc 259039790 Mar  8 05:37 EVNT.48958608._000022.pool.root.1
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc      6617 Mar  8 05:37 init_data.xml
[2026-03-08 08:30:25] drwxrwx--x. 2 boinc boinc      4096 Mar  8 05:37 shared
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc    597933 Mar  8 05:37 input.tar.gz
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc     15845 Mar  8 05:37 start_atlas.sh
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc         0 Mar  8 05:37 boinc_lockfile
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc      2525 Mar  8 05:37 pandaJob.out
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc    999169 Mar  8 05:38 agis_schedconf.cvmfs.json
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc   1521291 Mar  8 05:38 agis_ddmendpoints.agis.ALL.json
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc       442 Mar  8 05:39 workernode_map.json
[2026-03-08 08:30:25] drwx------. 5 boinc boinc      4096 Mar  8 05:39 pilot3
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc 174282758 Mar  8 08:29 HITS.48958610._000533.pool.root.1
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc        95 Mar  8 08:29 pilot_heartbeat.json
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc       531 Mar  8 08:29 boinc_task_state.xml
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc      1028 Mar  8 08:29 memory_monitor_summary.json
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc    333382 Mar  8 08:29 log.48958610._000533.job.log.tgz.1
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc      6344 Mar  8 08:29 heartbeat.json
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc        28 Mar  8 08:29 wrapper_checkpoint.txt
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc      8192 Mar  8 08:29 boinc_mmap_file
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc      5434 Mar  8 08:30 pilotlog.txt
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc   1379502 Mar  8 08:30 log.48958610._000533.job.log.1
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc       357 Mar  8 08:30 output.list
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc       620 Mar  8 08:30 runtime_log
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc   1730560 Mar  8 08:30 result.tar.gz
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc      9205 Mar  8 08:30 runtime_log.err
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc       666 Mar  8 08:30 dLaLDm3p4I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmobVLDmaOh3Rm.diag
[2026-03-08 08:30:25] -rw-r--r--. 1 boinc boinc     20884 Mar  8 08:30 stderr.txt
[2026-03-08 08:30:25] HITS file was successfully produced:
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc 174282758 Mar  8 08:29 shared/HITS.pool.root.1
[2026-03-08 08:30:25]  *** Contents of shared directory: ***
[2026-03-08 08:30:25] total 425472
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc 259039790 Mar  8 05:37 ATLAS.root_0
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc    597933 Mar  8 05:37 input.tar.gz
[2026-03-08 08:30:25] -rw-r--r--. 2 boinc boinc     15845 Mar  8 05:37 start_atlas.sh
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc 174282758 Mar  8 08:29 HITS.pool.root.1
[2026-03-08 08:30:25] -rw-------. 1 boinc boinc   1730560 Mar  8 08:30 result.tar.gz
08:30:26 (1844691): run_atlas exited; CPU time 37435.189593
08:30:26 (1844691): called boinc_finish(0)

</stderr_txt>
]]>

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