Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:03 (2108262): wrapper (7.7.26015): starting
13:39:03 (2108262): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 13:39:04] Arguments: --nthreads 4
[2026-03-09 13:39:04] Threads: 4
[2026-03-09 13:39:04] Checking for CVMFS
[2026-03-09 13:39:04] No cvmfs_config command found, will try listing directly
[2026-03-09 13:39:04] CVMFS is ok
[2026-03-09 13:39:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 13:39:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 13:39:04] Further information can be found at the LHC@home message board.
[2026-03-09 13:39:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 13:39:04] Checking for apptainer binary...
[2026-03-09 13:39:04] which: no apptainer in ((null))
[2026-03-09 13:39:04] apptainer is not installed, using version from CVMFS
[2026-03-09 13:39:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 13:39:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-09 13:39:04] apptainer works
[2026-03-09 13:39:04] Set ATHENA_PROC_NUMBER=4
[2026-03-09 13:39:04] Set ATHENA_CORE_NUMBER=4
[2026-03-09 13:39:04] Starting ATLAS job with PandaID=7044938204
[2026-03-09 13:39:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 16:42:48]  *** The last 200 lines of the pilot log: ***
[2026-03-09 16:42:48] 2026-03-09 15:41:59,503 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/PanDA_Pilot-7044938204/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,504 | INFO     | extracted standard info from prmon json
[2026-03-09 16:42:48] 2026-03-09 15:41:59,504 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 16:42:48] 2026-03-09 15:41:59,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 16:42:48] 2026-03-09 15:41:59,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 16:42:48] 2026-03-09 15:41:59,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 16:42:48] 2026-03-09 15:41:59,508 | INFO     | fitting pss+swap vs Time
[2026-03-09 16:42:48] 2026-03-09 15:41:59,508 | INFO     | sum of square deviations: 1748746273.5505564
[2026-03-09 16:42:48] 2026-03-09 15:41:59,509 | INFO     | sum of deviations: 10415016000.067413
[2026-03-09 16:42:48] 2026-03-09 15:41:59,509 | INFO     | mean x: 1773065507.5730338
[2026-03-09 16:42:48] 2026-03-09 15:41:59,509 | INFO     | mean y: 2305301.7640449437
[2026-03-09 16:42:48] 2026-03-09 15:41:59,510 | INFO     | intersect: -10557548869.102856
[2026-03-09 16:42:48] 2026-03-09 15:41:59,510 | INFO     | chi2: 3.056231235244076
[2026-03-09 16:42:48] 2026-03-09 15:41:59,510 | INFO     | sum of square deviations: 1605482436.023122
[2026-03-09 16:42:48] 2026-03-09 15:41:59,511 | INFO     | sum of deviations: 21206256479.647404
[2026-03-09 16:42:48] 2026-03-09 15:41:59,511 | INFO     | mean x: 1773065355.0751445
[2026-03-09 16:42:48] 2026-03-09 15:41:59,511 | INFO     | mean y: 2316518.104046243
[2026-03-09 16:42:48] 2026-03-09 15:41:59,512 | INFO     | intersect: -23417484179.335094
[2026-03-09 16:42:48] 2026-03-09 15:41:59,512 | INFO     | chi2: 2.2729805486338055
[2026-03-09 16:42:48] 2026-03-09 15:41:59,512 | INFO     | current chi2=2.2729805486338055 (change=25.627991677394096 %)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,512 | INFO     | sum of square deviations: 1470265260.9940448
[2026-03-09 16:42:48] 2026-03-09 15:41:59,513 | INFO     | sum of deviations: 20633391097.589287
[2026-03-09 16:42:48] 2026-03-09 15:41:59,513 | INFO     | mean x: 1773065202.577381
[2026-03-09 16:42:48] 2026-03-09 15:41:59,513 | INFO     | mean y: 2315871.839285714
[2026-03-09 16:42:48] 2026-03-09 15:41:59,514 | INFO     | intersect: -24880505437.269817
[2026-03-09 16:42:48] 2026-03-09 15:41:59,514 | INFO     | chi2: 2.2760065564604606
[2026-03-09 16:42:48] 2026-03-09 15:41:59,514 | INFO     | current chi2=2.2760065564604606 (change=-0.13312950823419423 %)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,514 | INFO     | right removable region: 167
[2026-03-09 16:42:48] 2026-03-09 15:41:59,514 | INFO     | sum of square deviations: 1605474506.023122
[2026-03-09 16:42:48] 2026-03-09 15:41:59,515 | INFO     | sum of deviations: -23815984311.16763
[2026-03-09 16:42:48] 2026-03-09 15:41:59,515 | INFO     | mean x: 1773065660.0751445
[2026-03-09 16:42:48] 2026-03-09 15:41:59,516 | INFO     | mean y: 2341378.705202312
[2026-03-09 16:42:48] 2026-03-09 15:41:59,516 | INFO     | intersect: 26304412065.345905
[2026-03-09 16:42:48] 2026-03-09 15:41:59,516 | INFO     | chi2: 0.870301204992824
[2026-03-09 16:42:48] 2026-03-09 15:41:59,516 | INFO     | current chi2=0.870301204992824 (change=71.5237121145606 %)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,516 | INFO     | sum of square deviations: 1470249400.9940448
[2026-03-09 16:42:48] 2026-03-09 15:41:59,517 | INFO     | sum of deviations: -21982743513.821434
[2026-03-09 16:42:48] 2026-03-09 15:41:59,517 | INFO     | mean x: 1773065812.577381
[2026-03-09 16:42:48] 2026-03-09 15:41:59,517 | INFO     | mean y: 2339272.6785714286
[2026-03-09 16:42:48] 2026-03-09 15:41:59,518 | INFO     | intersect: 26512706129.25505
[2026-03-09 16:42:48] 2026-03-09 15:41:59,518 | INFO     | chi2: 0.8627175819697595
[2026-03-09 16:42:48] 2026-03-09 15:41:59,518 | INFO     | current chi2=0.8627175819697595 (change=0.8713791247855528 %)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,518 | INFO     | left removable region: 20
[2026-03-09 16:42:48] 2026-03-09 15:41:59,518 | INFO     | sum of square deviations: 984942489.850343
[2026-03-09 16:42:48] 2026-03-09 15:41:59,519 | INFO     | sum of deviations: -4609498716.585031
[2026-03-09 16:42:48] 2026-03-09 15:41:59,519 | INFO     | mean x: 1773065782.0884354
[2026-03-09 16:42:48] 2026-03-09 15:41:59,520 | INFO     | mean y: 2344411.8911564625
[2026-03-09 16:42:48] 2026-03-09 15:41:59,520 | INFO     | intersect: 8300234421.895002
[2026-03-09 16:42:48] 2026-03-09 15:41:59,520 | INFO     | chi2: 0.021043511628402633
[2026-03-09 16:42:48] 2026-03-09 15:41:59,520 | INFO     | current memory leak: -4.68 B/s (using 147 data points, chi2=0.02)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,520 | INFO     | could have reported an average CPU frequency of 2663 MHz (10 samples)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | ..............................
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . Timing measurements:
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . get job = 0 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . initial setup = 30 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . payload setup = 46 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . stage-in = 0 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . payload execution = 10827 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . stage-out = 1 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | . log creation = 0 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,521 | INFO     | ..............................
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | 
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | job summary report
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | --------------------------------------------------
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | PanDA job id: 7044938204
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | task id: 48958610
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | errors: (none)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 16:42:48] 2026-03-09 15:41:59,632 | INFO     | pilot state: finished 
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | transexitcode: 0
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | exeerrorcode: 0
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | exeerrordiag: 
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | exitcode: 0
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | exitmsg: OK
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | cpuconsumptiontime: 34531 s
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | nevents: 400
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | neventsw: 0
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | pid: 2123956
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | pgrp: 2123956
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | corecount: 4
[2026-03-09 16:42:48] 2026-03-09 15:41:59,633 | INFO     | event service: False
[2026-03-09 16:42:48] 2026-03-09 15:41:59,634 | INFO     | sizes: {0: 2279093, 1: 2279789, 2: 2280250, 12: 2280250, 10878: 2309466, 10879: 2309465, 10880: 2318669, 10884: 2318919}
[2026-03-09 16:42:48] 2026-03-09 15:41:59,634 | INFO     | --------------------------------------------------
[2026-03-09 16:42:48] 2026-03-09 15:41:59,634 | INFO     | 
[2026-03-09 16:42:48] 2026-03-09 15:41:59,634 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-09 16:42:48] 2026-03-09 15:41:59,925 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,925 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,925 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,925 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | job 7044938204 has completed (purged errors)
[2026-03-09 16:42:48] 2026-03-09 15:41:59,927 | INFO     | overall cleanup function is called
[2026-03-09 16:42:48] 2026-03-09 15:41:59,974 | INFO     | number of running child processes to parent process 2123956: 1
[2026-03-09 16:42:48] 2026-03-09 15:41:59,974 | INFO     | maximum number of monitored processes: 6
[2026-03-09 16:42:48] 2026-03-09 15:41:59,974 | INFO     | aborting job monitoring since job object (job id=7044938204) has expired
[2026-03-09 16:42:48] 2026-03-09 15:42:00,964 | INFO     | --- collectZombieJob: --- 10, [2123956]
[2026-03-09 16:42:48] 2026-03-09 15:42:00,964 | INFO     | zombie collector waiting for pid 2123956
[2026-03-09 16:42:48] 2026-03-09 15:42:00,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 16:42:48] 2026-03-09 15:42:00,964 | INFO     | collected zombie processes
[2026-03-09 16:42:48] 2026-03-09 15:42:00,964 | INFO     | will attempt to kill all subprocesses of pid=2123956
[2026-03-09 16:42:48] 2026-03-09 15:42:01,859 | INFO     | process IDs to be killed: [2123956] (in reverse order)
[2026-03-09 16:42:48] 2026-03-09 15:42:02,284 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 16:42:48] 2026-03-09 15:42:02,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 16:42:48] 2026-03-09 15:42:02,318 | INFO     | did not find any defunct processes belonging to 2123956
[2026-03-09 16:42:48] 2026-03-09 15:42:02,345 | INFO     | did not find any defunct processes belonging to 2123956
[2026-03-09 16:42:48] 2026-03-09 15:42:02,345 | INFO     | ready for new job
[2026-03-09 16:42:48] 2026-03-09 15:42:02,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 16:42:48] 2026-03-09 15:42:02,347 | INFO     | **************************************
[2026-03-09 16:42:48] 2026-03-09 15:42:02,348 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 16:42:48] 2026-03-09 15:42:02,348 | INFO     | **************************************
[2026-03-09 16:42:48] 2026-03-09 15:42:02,348 | INFO     | 
[2026-03-09 16:42:48] 2026-03-09 15:42:02,356 | INFO     | architecture information:
[2026-03-09 16:42:48] 2026-03-09 15:42:02,357 | INFO     | executing command: cat /etc/os-release
[2026-03-09 16:42:48] 2026-03-09 15:42:02,379 | INFO     | cat /etc/os-release:
[2026-03-09 16:42:48] NAME="CentOS Linux"
[2026-03-09 16:42:48] VERSION="7 (Core)"
[2026-03-09 16:42:48] ID="centos"
[2026-03-09 16:42:48] ID_LIKE="rhel fedora"
[2026-03-09 16:42:48] VERSION_ID="7"
[2026-03-09 16:42:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 16:42:48] ANSI_COLOR="0;31"
[2026-03-09 16:42:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 16:42:48] HOME_URL="https://www.centos.org/"
[2026-03-09 16:42:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 16:42:48] 
[2026-03-09 16:42:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 16:42:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 16:42:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 16:42:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 16:42:48] 
[2026-03-09 16:42:48] 2026-03-09 15:42:02,379 | INFO     | **************************************
[2026-03-09 16:42:48] 2026-03-09 15:42:02,883 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-09 16:42:48] 2026-03-09 15:42:02,955 | INFO     | sufficient remaining disk space (57331941376 B)
[2026-03-09 16:42:48] 2026-03-09 15:42:02,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 16:42:48] 2026-03-09 15:42:02,956 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 16:42:48] 2026-03-09 15:42:02,956 | INFO     | update_server=False
[2026-03-09 16:42:48] 2026-03-09 15:42:02,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 16:42:48] 2026-03-09 15:42:03,404 | INFO     | all data control threads have been joined
[2026-03-09 16:42:48] 2026-03-09 15:42:03,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 16:42:48] 2026-03-09 15:42:03,487 | INFO     | aborting loop
[2026-03-09 16:42:48] 2026-03-09 15:42:03,700 | INFO     | all job control threads have been joined
[2026-03-09 16:42:48] 2026-03-09 15:42:03,964 | INFO     | [job] retrieve thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,186 | INFO     | [job] validate thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,234 | INFO     | all payload control threads have been joined
[2026-03-09 16:42:48] 2026-03-09 15:42:04,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 16:42:48] 2026-03-09 15:42:04,410 | INFO     | [data] control thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,414 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,493 | INFO     | [job] job monitor thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 16:42:48] 2026-03-09 15:42:04,706 | INFO     | [job] control thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,789 | INFO     | [payload] failed_post thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:04,921 | INFO     | [data] copytool_in thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:05,161 | INFO     | [payload] validate_post thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:05,239 | INFO     | [payload] control thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:05,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:05,333 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:05,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 16:42:48] 2026-03-09 15:42:05,657 | INFO     | [job] queue monitor thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:06,381 | INFO     | [data] copytool_out thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:09,480 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:13,354 | INFO     | job.realtimelogging is not enabled
[2026-03-09 16:42:48] 2026-03-09 15:42:14,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 16:42:48] 2026-03-09 15:42:32,456 | INFO     | PID=2117831 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 16:42:48] 2026-03-09 15:42:32,456 | INFO     | .. there are 29 such processes running
[2026-03-09 16:42:48] 2026-03-09 15:42:32,457 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 16:42:48] 2026-03-09 15:42:32,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 16:42:48] 2026-03-09 15:42:32,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 16:42:48] 2026-03-09 15:42:41,657 | INFO     | [monitor] cgroup control has ended
[2026-03-09 16:42:48] 2026-03-09 15:42:42,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23312588891968)>', '<ExcThread(monitor, started 23312275072768)>']
[2026-03-09 16:42:48] 2026-03-09 15:42:43,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 16:42:48] 2026-03-09 15:42:43,524 | INFO     | [monitor] control thread has ended
[2026-03-09 16:42:48] 2026-03-09 15:42:47,575 | INFO     | all workflow threads have been joined
[2026-03-09 16:42:48] 2026-03-09 15:42:47,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 16:42:48] 2026-03-09 15:42:47,575 | INFO     | traces error code: 0
[2026-03-09 16:42:48] 2026-03-09 15:42:47,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 16:42:48] 2026-03-09 15:42:47,784 [wrapper] ==== pilot stdout END ====
[2026-03-09 16:42:48] 2026-03-09 15:42:47,788 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 16:42:48] 2026-03-09 15:42:47,819 [wrapper] pilotpid: 2117831
[2026-03-09 16:42:48] 2026-03-09 15:42:47,829 [wrapper] Pilot exit status: 0
[2026-03-09 16:42:48] 2026-03-09 15:42:47,870 [wrapper] pandaids: 7044938204
[2026-03-09 16:42:48] 2026-03-09 15:42:48,097 [wrapper] cleanup supervisor_pilot 2535618 2117832
[2026-03-09 16:42:48] 2026-03-09 15:42:48,105 [wrapper] Test setup, not cleaning
[2026-03-09 16:42:48] 2026-03-09 15:42:48,109 [wrapper] apfmon messages muted
[2026-03-09 16:42:48] 2026-03-09 15:42:48,112 [wrapper] ==== wrapper stdout END ====
[2026-03-09 16:42:48] 2026-03-09 15:42:48,115 [wrapper] ==== wrapper stderr END ====
[2026-03-09 16:42:48]  *** Error codes and diagnostics ***
[2026-03-09 16:42:48]     "exeErrorCode": 0,
[2026-03-09 16:42:48]     "exeErrorDiag": "",
[2026-03-09 16:42:48]     "pilotErrorCode": 0,
[2026-03-09 16:42:48]     "pilotErrorDiag": "",
[2026-03-09 16:42:48]  *** Listing of results directory ***
[2026-03-09 16:42:48] total 427388
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc      5111 Mar  7 12:17 queuedata.json
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc    584627 Mar  7 12:17 pilot3.tar.gz
[2026-03-09 16:42:48] -rwx------. 1 boinc boinc     36322 Mar  7 12:17 runpilot2-wrapper.sh
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc       100 Mar  9 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 16:42:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 13:02 run_atlas
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc       105 Mar  9 13:02 job.xml
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc 259486482 Mar  9 13:39 EVNT.48958608._000021.pool.root.1
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc      6617 Mar  9 13:39 init_data.xml
[2026-03-09 16:42:48] drwxrwx--x. 2 boinc boinc      4096 Mar  9 13:39 shared
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc    597933 Mar  9 13:39 input.tar.gz
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:39 start_atlas.sh
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc         0 Mar  9 13:39 boinc_lockfile
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc      2525 Mar  9 13:39 pandaJob.out
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc    990710 Mar  9 13:39 agis_schedconf.cvmfs.json
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc       443 Mar  9 13:40 workernode_map.json
[2026-03-09 16:42:48] drwx------. 5 boinc boinc      4096 Mar  9 13:40 pilot3
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc 170639728 Mar  9 16:41 HITS.48958610._000516.pool.root.1
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc       530 Mar  9 16:41 boinc_task_state.xml
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc      1026 Mar  9 16:41 memory_monitor_summary.json
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc   1511578 Mar  9 16:41 agis_ddmendpoints.agis.ALL.json
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc    354153 Mar  9 16:41 log.48958610._000516.job.log.tgz.1
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc      6351 Mar  9 16:41 heartbeat.json
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc      8192 Mar  9 16:42 boinc_mmap_file
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc        28 Mar  9 16:42 wrapper_checkpoint.txt
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc        95 Mar  9 16:42 pilot_heartbeat.json
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc      4902 Mar  9 16:42 pilotlog.txt
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc   1444942 Mar  9 16:42 log.48958610._000516.job.log.1
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc       357 Mar  9 16:42 output.list
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc       620 Mar  9 16:42 runtime_log
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc   1812480 Mar  9 16:42 result.tar.gz
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc      9205 Mar  9 16:42 runtime_log.err
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc       666 Mar  9 16:42 NXyKDm3p4I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbbVLDmJCqLXn.diag
[2026-03-09 16:42:48] -rw-r--r--. 1 boinc boinc     20942 Mar  9 16:42 stderr.txt
[2026-03-09 16:42:48] HITS file was successfully produced:
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc 170639728 Mar  9 16:41 shared/HITS.pool.root.1
[2026-03-09 16:42:48]  *** Contents of shared directory: ***
[2026-03-09 16:42:48] total 422432
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc 259486482 Mar  9 13:39 ATLAS.root_0
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc    597933 Mar  9 13:39 input.tar.gz
[2026-03-09 16:42:48] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:39 start_atlas.sh
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc 170639728 Mar  9 16:41 HITS.pool.root.1
[2026-03-09 16:42:48] -rw-------. 1 boinc boinc   1812480 Mar  9 16:42 result.tar.gz
16:42:50 (2108262): run_atlas exited; CPU time 35137.513461
16:42:50 (2108262): called boinc_finish(0)

</stderr_txt>
]]>

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