Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:22 (1583609): wrapper (7.7.26015): starting
14:18:22 (1583609): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 14:18:22] Arguments: --nthreads 4
[2026-03-08 14:18:22] Threads: 4
[2026-03-08 14:18:22] Checking for CVMFS
[2026-03-08 14:18:22] No cvmfs_config command found, will try listing directly
[2026-03-08 14:18:22] CVMFS is ok
[2026-03-08 14:18:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:18:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:18:22] Further information can be found at the LHC@home message board.
[2026-03-08 14:18:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:18:22] Checking for apptainer binary...
[2026-03-08 14:18:22] which: no apptainer in ((null))
[2026-03-08 14:18:22] apptainer is not installed, using version from CVMFS
[2026-03-08 14:18:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:18:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-08 14:18:23] apptainer works
[2026-03-08 14:18:23] Set ATHENA_PROC_NUMBER=4
[2026-03-08 14:18:23] Set ATHENA_CORE_NUMBER=4
[2026-03-08 14:18:23] Starting ATLAS job with PandaID=7044700050
[2026-03-08 14:18:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 15:48:49]  *** The last 200 lines of the pilot log: ***
[2026-03-08 15:48:49]  filesize=260501
[2026-03-08 15:48:49]  filetype=log
[2026-03-08 15:48:49]  guid=8daf83e2-4559-4715-8f8d-3c4fa7a42ad4
[2026-03-08 15:48:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 15:48:49]  is_altstaged=None
[2026-03-08 15:48:49]  is_tar=False
[2026-03-08 15:48:49]  lfn=log.48958643._000477.job.log.tgz.1
[2026-03-08 15:48:49]  mtime=0
[2026-03-08 15:48:49]  protocol_id=None
[2026-03-08 15:48:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 15:48:49]  replicas=None
[2026-03-08 15:48:49]  scope=mc23_13p6TeV
[2026-03-08 15:48:49]  status=None
[2026-03-08 15:48:49]  status_code=0
[2026-03-08 15:48:49]  storage_token=
[2026-03-08 15:48:49]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7044700050/log.48958643._000477.job.log.tgz.1
[2026-03-08 15:48:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/09/log.48958643._000477.job.log.tgz.1
[2026-03-08 15:48:49]  workdir=None
[2026-03-08 15:48:49] ]
[2026-03-08 15:48:49] 2026-03-08 14:47:55,529 | INFO     | transferring file log.48958643._000477.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7044700050/log.48958643._000477.job.log.tgz.1 to /var/lib/
[2026-03-08 15:48:49] 2026-03-08 14:47:55,529 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7044700050/log.48958643._000477.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-08 15:48:49] 2026-03-08 14:47:55,550 | INFO     | adding to output.list: log.48958643._000477.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/09/log.48958643._000477.job.log.tg
[2026-03-08 15:48:49] 2026-03-08 14:47:55,551 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 15:48:49] 2026-03-08 14:47:55,551 | INFO     | summary of transferred files:
[2026-03-08 15:48:49] 2026-03-08 14:47:55,551 | INFO     |  -- lfn=log.48958643._000477.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 15:48:49] 2026-03-08 14:47:55,551 | INFO     | stage-out finished correctly
[2026-03-08 15:48:49] 2026-03-08 14:47:56,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 15:48:49] 2026-03-08 14:47:56,260 | INFO     | time since job start (5361s) is within the limit (349056.0s)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,868 | INFO     | job 7044700050 has state=finished
[2026-03-08 15:48:49] 2026-03-08 14:47:56,868 | INFO     | preparing for final server update for job 7044700050 in state='finished'
[2026-03-08 15:48:49] 2026-03-08 14:47:56,868 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7044700050/jobReport.json
[2026-03-08 15:48:49] 2026-03-08 14:47:56,870 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | INFO     | this job has now completed (state=finished)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | INFO     | log transfer has been attempted: DONE
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | INFO     | job 7044700050 has finished - writing final server update
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391369/.job.ad'
[2026-03-08 15:48:49] 2026-03-08 14:47:56,871 | INFO     | total number of processed events: 400 (read)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7044700050/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | INFO     | extracted standard info from prmon json
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 15:48:49] 2026-03-08 14:47:56,889 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | fitting pss+swap vs Time
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | sum of square deviations: 164765880.0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | sum of deviations: -839998182.0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | mean x: 1772978680.0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | mean y: 2359776.3827160494
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | intersect: 9041238869.09754
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | chi2: 0.0004957468792626008
[2026-03-08 15:48:49] 2026-03-08 14:47:56,891 | INFO     | current memory leak: -5.10 B/s (using 81 data points, chi2=0.00)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | could have reported an average CPU frequency of 3606 MHz (6 samples)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | ..............................
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . Timing measurements:
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . get job = 0 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . initial setup = 4 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . payload setup = 5 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . stage-in = 0 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . payload execution = 5340 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . stage-out = 0 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | . log creation = 0 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,892 | INFO     | ..............................
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | 
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | job summary report
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | --------------------------------------------------
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | PanDA job id: 7044700050
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | task id: 48958643
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | errors: (none)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | pilot state: finished 
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | transexitcode: 0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | exeerrorcode: 0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | exeerrordiag: 
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | exitcode: 0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | exitmsg: OK
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | cpuconsumptiontime: 20478 s
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | nevents: 400
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | neventsw: 0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | pid: 1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | pgrp: 1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:56,940 | INFO     | corecount: 4
[2026-03-08 15:48:49] 2026-03-08 14:47:56,941 | INFO     | event service: False
[2026-03-08 15:48:49] 2026-03-08 14:47:56,941 | INFO     | sizes: {0: 2295783, 11: 2295783, 5348: 2322366, 5349: 2331443, 5350: 2331443, 5351: 2331637}
[2026-03-08 15:48:49] 2026-03-08 14:47:56,941 | INFO     | --------------------------------------------------
[2026-03-08 15:48:49] 2026-03-08 14:47:56,941 | INFO     | 
[2026-03-08 15:48:49] 2026-03-08 14:47:56,941 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | job 7044700050 has completed (purged errors)
[2026-03-08 15:48:49] 2026-03-08 14:47:56,963 | INFO     | overall cleanup function is called
[2026-03-08 15:48:49] 2026-03-08 14:47:57,968 | INFO     | --- collectZombieJob: --- 10, [1604756]
[2026-03-08 15:48:49] 2026-03-08 14:47:57,968 | INFO     | zombie collector waiting for pid 1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:57,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 15:48:49] 2026-03-08 14:47:57,968 | INFO     | collected zombie processes
[2026-03-08 15:48:49] 2026-03-08 14:47:57,968 | INFO     | will attempt to kill all subprocesses of pid=1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:58,373 | INFO     | process IDs to be killed: [1604756] (in reverse order)
[2026-03-08 15:48:49] 2026-03-08 14:47:58,606 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 15:48:49] 2026-03-08 14:47:58,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 15:48:49] 2026-03-08 14:47:58,637 | INFO     | did not find any defunct processes belonging to 1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:58,665 | INFO     | did not find any defunct processes belonging to 1604756
[2026-03-08 15:48:49] 2026-03-08 14:47:58,666 | INFO     | ready for new job
[2026-03-08 15:48:49] 2026-03-08 14:47:58,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 15:48:49] 2026-03-08 14:47:58,667 | INFO     | **************************************
[2026-03-08 15:48:49] 2026-03-08 14:47:58,668 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 15:48:49] 2026-03-08 14:47:58,668 | INFO     | **************************************
[2026-03-08 15:48:49] 2026-03-08 14:47:58,668 | INFO     | 
[2026-03-08 15:48:49] 2026-03-08 14:47:58,674 | INFO     | architecture information:
[2026-03-08 15:48:49] 2026-03-08 14:47:58,675 | INFO     | executing command: cat /etc/os-release
[2026-03-08 15:48:49] 2026-03-08 14:47:58,690 | INFO     | cat /etc/os-release:
[2026-03-08 15:48:49] NAME="CentOS Linux"
[2026-03-08 15:48:49] VERSION="7 (Core)"
[2026-03-08 15:48:49] ID="centos"
[2026-03-08 15:48:49] ID_LIKE="rhel fedora"
[2026-03-08 15:48:49] VERSION_ID="7"
[2026-03-08 15:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 15:48:49] ANSI_COLOR="0;31"
[2026-03-08 15:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 15:48:49] HOME_URL="https://www.centos.org/"
[2026-03-08 15:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 15:48:49] 
[2026-03-08 15:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 15:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 15:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 15:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 15:48:49] 
[2026-03-08 15:48:49] 2026-03-08 14:47:58,691 | INFO     | **************************************
[2026-03-08 15:48:49] 2026-03-08 14:47:59,193 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-08 15:48:49] 2026-03-08 14:47:59,208 | INFO     | sufficient remaining disk space (20711473152 B)
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | INFO     | update_server=False
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:48:49] 2026-03-08 14:47:59,209 | INFO     | aborting loop
[2026-03-08 15:48:49] 2026-03-08 14:47:59,910 | INFO     | all data control threads have been joined
[2026-03-08 15:48:49] 2026-03-08 14:48:00,032 | INFO     | all payload control threads have been joined
[2026-03-08 15:48:49] 2026-03-08 14:48:00,214 | INFO     | [job] retrieve thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,214 | INFO     | [job] job monitor thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,234 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,318 | INFO     | [payload] failed_post thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,319 | INFO     | all job control threads have been joined
[2026-03-08 15:48:49] 2026-03-08 14:48:00,827 | INFO     | [payload] validate_post thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,915 | INFO     | [data] control thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,987 | INFO     | [job] validate thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:00,991 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,037 | INFO     | [payload] control thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,214 | INFO     | [data] copytool_out thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,325 | INFO     | [job] control thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,370 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,439 | INFO     | [data] copytool_in thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:01,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:48:49] 2026-03-08 14:48:02,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 15:48:49] 2026-03-08 14:48:02,955 | INFO     | [job] queue monitor thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:06,163 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:10,203 | INFO     | job.realtimelogging is not enabled
[2026-03-08 15:48:49] 2026-03-08 14:48:11,208 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 15:48:49] 2026-03-08 14:48:29,837 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-03-08 15:48:49] 2026-03-08 14:48:29,883 | INFO     | PID=1590576 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 15:48:49] 2026-03-08 14:48:29,883 | INFO     | .. there are 48 such processes running
[2026-03-08 15:48:49] 2026-03-08 14:48:29,884 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 15:48:49] 2026-03-08 14:48:29,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 15:48:49] 2026-03-08 14:48:29,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 15:48:49] 2026-03-08 14:48:43,475 | INFO     | [monitor] cgroup control has ended
[2026-03-08 15:48:49] 2026-03-08 14:48:44,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22727992321856)>', '<ExcThread(monitor, started 22727685555968)>']
[2026-03-08 15:48:49] 2026-03-08 14:48:44,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 15:48:49] 2026-03-08 14:48:44,960 | INFO     | [monitor] control thread has ended
[2026-03-08 15:48:49] 2026-03-08 14:48:49,141 | INFO     | all workflow threads have been joined
[2026-03-08 15:48:49] 2026-03-08 14:48:49,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 15:48:49] 2026-03-08 14:48:49,141 | INFO     | traces error code: 0
[2026-03-08 15:48:49] 2026-03-08 14:48:49,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 15:48:49] 2026-03-08 14:48:49,315 [wrapper] ==== pilot stdout END ====
[2026-03-08 15:48:49] 2026-03-08 14:48:49,317 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 15:48:49] 2026-03-08 14:48:49,320 [wrapper] pilotpid: 1590576
[2026-03-08 15:48:49] 2026-03-08 14:48:49,323 [wrapper] Pilot exit status: 0
[2026-03-08 15:48:49] 2026-03-08 14:48:49,332 [wrapper] pandaids: 7044700050
[2026-03-08 15:48:49] 2026-03-08 14:48:49,466 [wrapper] cleanup supervisor_pilot 2413631 1590577
[2026-03-08 15:48:49] 2026-03-08 14:48:49,469 [wrapper] Test setup, not cleaning
[2026-03-08 15:48:49] 2026-03-08 14:48:49,472 [wrapper] apfmon messages muted
[2026-03-08 15:48:49] 2026-03-08 14:48:49,474 [wrapper] ==== wrapper stdout END ====
[2026-03-08 15:48:49] 2026-03-08 14:48:49,476 [wrapper] ==== wrapper stderr END ====
[2026-03-08 15:48:49]  *** Error codes and diagnostics ***
[2026-03-08 15:48:49]     "exeErrorCode": 0,
[2026-03-08 15:48:49]     "exeErrorDiag": "",
[2026-03-08 15:48:49]     "pilotErrorCode": 0,
[2026-03-08 15:48:49]     "pilotErrorDiag": "",
[2026-03-08 15:48:49]  *** Listing of results directory ***
[2026-03-08 15:48:49] total 437344
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc    584627 Mar  7 07:32 pilot3.tar.gz
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc      5111 Mar  7 08:03 queuedata.json
[2026-03-08 15:48:49] -rwx------. 1 boinc boinc     36322 Mar  7 08:03 runpilot2-wrapper.sh
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc       100 Mar  8 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 15:48:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 14:18 run_atlas
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc       105 Mar  8 14:18 job.xml
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc 263702699 Mar  8 14:18 EVNT.48958641._000020.pool.root.1
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc      6708 Mar  8 14:18 init_data.xml
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:18 start_atlas.sh
[2026-03-08 15:48:49] drwxrwx--x. 2 boinc boinc      4096 Mar  8 14:18 shared
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc    597941 Mar  8 14:18 input.tar.gz
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc         0 Mar  8 14:18 boinc_lockfile
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc      2541 Mar  8 14:18 pandaJob.out
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc    999212 Mar  8 14:18 agis_schedconf.cvmfs.json
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc   1521291 Mar  8 14:18 agis_ddmendpoints.agis.ALL.json
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc       444 Mar  8 14:18 workernode_map.json
[2026-03-08 15:48:49] drwx------. 5 boinc boinc      4096 Mar  8 14:18 pilot3
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc 178125600 Mar  8 15:47 HITS.48958643._000477.pool.root.1
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc       529 Mar  8 15:47 boinc_task_state.xml
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc      1031 Mar  8 15:47 memory_monitor_summary.json
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc    260501 Mar  8 15:47 log.48958643._000477.job.log.tgz.1
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc      6345 Mar  8 15:47 heartbeat.json
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc        95 Mar  8 15:48 pilot_heartbeat.json
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc        27 Mar  8 15:48 wrapper_checkpoint.txt
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc      8192 Mar  8 15:48 boinc_mmap_file
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc      4902 Mar  8 15:48 pilotlog.txt
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc    777722 Mar  8 15:48 log.48958643._000477.job.log.1
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc       357 Mar  8 15:48 output.list
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc       620 Mar  8 15:48 runtime_log
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc   1054720 Mar  8 15:48 result.tar.gz
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc      9221 Mar  8 15:48 runtime_log.err
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc       662 Mar  8 15:48 FCAMDmYs0I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtkSLDmVFtl4m.diag
[2026-03-08 15:48:49] -rw-r--r--. 1 boinc boinc     21030 Mar  8 15:48 stderr.txt
[2026-03-08 15:48:49] HITS file was successfully produced:
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc 178125600 Mar  8 15:47 shared/HITS.pool.root.1
[2026-03-08 15:48:49]  *** Contents of shared directory: ***
[2026-03-08 15:48:49] total 433116
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc 263702699 Mar  8 14:18 ATLAS.root_0
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:18 start_atlas.sh
[2026-03-08 15:48:49] -rw-r--r--. 2 boinc boinc    597941 Mar  8 14:18 input.tar.gz
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc 178125600 Mar  8 15:47 HITS.pool.root.1
[2026-03-08 15:48:49] -rw-------. 1 boinc boinc   1054720 Mar  8 15:48 result.tar.gz
15:48:50 (1583609): run_atlas exited; CPU time 20721.233217
15:48:50 (1583609): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN