Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:09 (1652502): wrapper (7.7.26015): starting
17:06:09 (1652502): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 17:06:09] Arguments: --nthreads 4
[2026-03-07 17:06:09] Threads: 4
[2026-03-07 17:06:09] Checking for CVMFS
[2026-03-07 17:06:09] No cvmfs_config command found, will try listing directly
[2026-03-07 17:06:09] CVMFS is ok
[2026-03-07 17:06:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 17:06:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 17:06:09] Further information can be found at the LHC@home message board.
[2026-03-07 17:06:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 17:06:09] Checking for apptainer binary...
[2026-03-07 17:06:09] which: no apptainer in ((null))
[2026-03-07 17:06:09] apptainer is not installed, using version from CVMFS
[2026-03-07 17:06:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 17:06:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 17:06:09] apptainer works
[2026-03-07 17:06:09] Set ATHENA_PROC_NUMBER=4
[2026-03-07 17:06:09] Set ATHENA_CORE_NUMBER=4
[2026-03-07 17:06:09] Starting ATLAS job with PandaID=7039076262
[2026-03-07 17:06:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 18:24:36]  *** The last 200 lines of the pilot log: ***
[2026-03-07 18:24:36]  protocol_id=None
[2026-03-07 18:24:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 18:24:36]  replicas=None
[2026-03-07 18:24:36]  scope=mc23_13p6TeV
[2026-03-07 18:24:36]  status=None
[2026-03-07 18:24:36]  status_code=0
[2026-03-07 18:24:36]  storage_token=
[2026-03-07 18:24:36]  surl=/var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/log.48955015._006991.job.log.tgz.1
[2026-03-07 18:24:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/a7/log.48955015._006991.job.log.tgz.1
[2026-03-07 18:24:36]  workdir=None
[2026-03-07 18:24:36] ]
[2026-03-07 18:24:36] 2026-03-07 17:23:56,087 | INFO     | transferring file log.48955015._006991.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/log.48955015._006991.job.log.tgz.1 to /var/lib/b
[2026-03-07 18:24:36] 2026-03-07 17:23:56,088 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/log.48955015._006991.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/5/lo
[2026-03-07 18:24:36] 2026-03-07 17:23:56,092 | INFO     | time since job start (4653s) is within the limit (349056.0s)
[2026-03-07 18:24:36] 2026-03-07 17:23:56,104 | INFO     | adding to output.list: log.48955015._006991.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/a7/log.48955015._006991.job.log.tg
[2026-03-07 18:24:36] 2026-03-07 17:23:56,104 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 18:24:36] 2026-03-07 17:23:56,105 | INFO     | summary of transferred files:
[2026-03-07 18:24:36] 2026-03-07 17:23:56,105 | INFO     |  -- lfn=log.48955015._006991.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 18:24:36] 2026-03-07 17:23:56,105 | INFO     | stage-out finished correctly
[2026-03-07 18:24:36] 2026-03-07 17:23:58,098 | INFO     | time since job start (4655s) is within the limit (349056.0s)
[2026-03-07 18:24:36] 2026-03-07 17:23:58,396 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 18:24:36] 2026-03-07 17:23:58,510 | WARNING  | process 1663199 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 18:24:36] 2026-03-07 17:23:58,510 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:24:36] 2026-03-07 17:23:58,935 | INFO     | number of running child processes to parent process 1663199: 1
[2026-03-07 18:24:36] 2026-03-07 17:23:58,935 | INFO     | maximum number of monitored processes: 6
[2026-03-07 18:24:36] 2026-03-07 17:24:00,103 | INFO     | time since job start (4657s) is within the limit (349056.0s)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,158 | INFO     | job 7039076262 has state=finished
[2026-03-07 18:24:36] 2026-03-07 17:24:01,158 | INFO     | preparing for final server update for job 7039076262 in state='finished'
[2026-03-07 18:24:36] 2026-03-07 17:24:01,158 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/jobReport.json
[2026-03-07 18:24:36] 2026-03-07 17:24:01,165 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/5/workernode_map.json
[2026-03-07 18:24:36] 2026-03-07 17:24:01,165 | INFO     | this job has now completed (state=finished)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,166 | INFO     | log transfer has been attempted: DONE
[2026-03-07 18:24:36] 2026-03-07 17:24:01,166 | INFO     | job 7039076262 has finished - writing final server update
[2026-03-07 18:24:36] 2026-03-07 17:24:01,166 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_372295/.job.ad'
[2026-03-07 18:24:36] 2026-03-07 17:24:01,166 | INFO     | total number of processed events: 400 (read)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,193 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7039076262/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,195 | INFO     | extracted standard info from prmon json
[2026-03-07 18:24:36] 2026-03-07 17:24:01,195 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 18:24:36] 2026-03-07 17:24:01,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 18:24:36] 2026-03-07 17:24:01,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 18:24:36] 2026-03-07 17:24:01,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 18:24:36] 2026-03-07 17:24:01,196 | INFO     | fitting pss+swap vs Time
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | sum of square deviations: 101843770.0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | sum of deviations: 539624483.0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | mean x: 1772901983.0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | mean y: 2322341.768115942
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | intersect: -9391490514.787075
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | chi2: 0.00027001293005017975
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | current memory leak: 5.30 B/s (using 69 data points, chi2=0.00)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,197 | INFO     | could have reported an average CPU frequency of 3567 MHz (6 samples)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | ..............................
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . Timing measurements:
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . get job = 0 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . initial setup = 5 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . payload setup = 5 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . stage-in = 0 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . payload execution = 4631 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . stage-out = 0 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | . log creation = 0 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,198 | INFO     | ..............................
[2026-03-07 18:24:36] 2026-03-07 17:24:01,250 | INFO     | 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | job summary report
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | --------------------------------------------------
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | PanDA job id: 7039076262
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | task id: 48955015
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | errors: (none)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | pilot state: finished 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | transexitcode: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | exeerrorcode: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | exeerrordiag: 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | exitcode: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | exitmsg: OK
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | cpuconsumptiontime: 17669 s
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | nevents: 400
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | neventsw: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | pid: 1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | pgrp: 1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:01,251 | INFO     | corecount: 4
[2026-03-07 18:24:36] 2026-03-07 17:24:01,252 | INFO     | event service: False
[2026-03-07 18:24:36] 2026-03-07 17:24:01,252 | INFO     | sizes: {0: 2295820, 11: 2295820, 4640: 2322047, 4642: 2331067, 4644: 2331123, 4647: 2331317}
[2026-03-07 18:24:36] 2026-03-07 17:24:01,252 | INFO     | --------------------------------------------------
[2026-03-07 18:24:36] 2026-03-07 17:24:01,252 | INFO     | 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,252 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/5
[2026-03-07 18:24:36] 2026-03-07 17:24:01,271 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,271 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | job 7039076262 has completed (purged errors)
[2026-03-07 18:24:36] 2026-03-07 17:24:01,272 | INFO     | overall cleanup function is called
[2026-03-07 18:24:36] 2026-03-07 17:24:01,717 | INFO     | PID=1657041 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 18:24:36] 2026-03-07 17:24:01,717 | INFO     | .. there are 54 such processes running
[2026-03-07 18:24:36] 2026-03-07 17:24:02,279 | INFO     | --- collectZombieJob: --- 10, [1663199]
[2026-03-07 18:24:36] 2026-03-07 17:24:02,280 | INFO     | zombie collector waiting for pid 1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:02,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 18:24:36] 2026-03-07 17:24:02,280 | INFO     | collected zombie processes
[2026-03-07 18:24:36] 2026-03-07 17:24:02,280 | INFO     | will attempt to kill all subprocesses of pid=1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:02,710 | INFO     | process IDs to be killed: [1663199] (in reverse order)
[2026-03-07 18:24:36] 2026-03-07 17:24:02,918 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 18:24:36] 2026-03-07 17:24:02,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 18:24:36] 2026-03-07 17:24:02,944 | INFO     | did not find any defunct processes belonging to 1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:02,969 | INFO     | did not find any defunct processes belonging to 1663199
[2026-03-07 18:24:36] 2026-03-07 17:24:02,969 | INFO     | ready for new job
[2026-03-07 18:24:36] 2026-03-07 17:24:02,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 18:24:36] 2026-03-07 17:24:02,970 | INFO     | **************************************
[2026-03-07 18:24:36] 2026-03-07 17:24:02,970 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 18:24:36] 2026-03-07 17:24:02,970 | INFO     | **************************************
[2026-03-07 18:24:36] 2026-03-07 17:24:02,970 | INFO     | 
[2026-03-07 18:24:36] 2026-03-07 17:24:02,976 | INFO     | architecture information:
[2026-03-07 18:24:36] 2026-03-07 17:24:02,976 | INFO     | executing command: cat /etc/os-release
[2026-03-07 18:24:36] 2026-03-07 17:24:02,990 | INFO     | cat /etc/os-release:
[2026-03-07 18:24:36] NAME="CentOS Linux"
[2026-03-07 18:24:36] VERSION="7 (Core)"
[2026-03-07 18:24:36] ID="centos"
[2026-03-07 18:24:36] ID_LIKE="rhel fedora"
[2026-03-07 18:24:36] VERSION_ID="7"
[2026-03-07 18:24:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 18:24:36] ANSI_COLOR="0;31"
[2026-03-07 18:24:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 18:24:36] HOME_URL="https://www.centos.org/"
[2026-03-07 18:24:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 18:24:36] 
[2026-03-07 18:24:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 18:24:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 18:24:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 18:24:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 18:24:36] 
[2026-03-07 18:24:36] 2026-03-07 17:24:02,990 | INFO     | **************************************
[2026-03-07 18:24:36] 2026-03-07 17:24:03,493 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/5
[2026-03-07 18:24:36] 2026-03-07 17:24:03,506 | INFO     | sufficient remaining disk space (20027801600 B)
[2026-03-07 18:24:36] 2026-03-07 17:24:03,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 18:24:36] 2026-03-07 17:24:03,506 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 18:24:36] 2026-03-07 17:24:03,506 | INFO     | update_server=False
[2026-03-07 18:24:36] 2026-03-07 17:24:03,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 18:24:36] 2026-03-07 17:24:03,772 | INFO     | all data control threads have been joined
[2026-03-07 18:24:36] 2026-03-07 17:24:03,945 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 18:24:36] 2026-03-07 17:24:03,946 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 18:24:36] 2026-03-07 17:24:03,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:24:36] 2026-03-07 17:24:03,946 | INFO     | will abort loop
[2026-03-07 18:24:36] 2026-03-07 17:24:04,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 18:24:36] 2026-03-07 17:24:04,335 | INFO     | all payload control threads have been joined
[2026-03-07 18:24:36] 2026-03-07 17:24:04,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 18:24:36] 2026-03-07 17:24:04,509 | INFO     | [job] retrieve thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:04,673 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:04,777 | INFO     | [data] control thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:04,810 | INFO     | all job control threads have been joined
[2026-03-07 18:24:36] 2026-03-07 17:24:04,899 | INFO     | [payload] validate_post thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:04,951 | INFO     | [job] job monitor thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,084 | INFO     | [job] validate thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,217 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,292 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,340 | INFO     | [payload] control thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,443 | INFO     | [data] copytool_in thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,674 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,815 | INFO     | [job] control thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:05,934 | INFO     | [payload] failed_post thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:06,171 | INFO     | [data] copytool_out thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:06,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:24:36] 2026-03-07 17:24:07,267 | INFO     | [job] queue monitor thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:08,460 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 18:24:36] 2026-03-07 17:24:30,315 | INFO     | [monitor] cgroup control has ended
[2026-03-07 18:24:36] 2026-03-07 17:24:31,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23147529455424)>', '<ExcThread(monitor, started 23147293460224)>']
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | INFO     | PID=1657041 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | INFO     | .. there are 53 such processes running
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 18:24:36] 2026-03-07 17:24:34,299 | INFO     | [monitor] control thread has ended
[2026-03-07 18:24:36] 2026-03-07 17:24:36,218 | INFO     | all workflow threads have been joined
[2026-03-07 18:24:36] 2026-03-07 17:24:36,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 18:24:36] 2026-03-07 17:24:36,218 | INFO     | traces error code: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:36,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 18:24:36] 2026-03-07 17:24:36,377 [wrapper] ==== pilot stdout END ====
[2026-03-07 18:24:36] 2026-03-07 17:24:36,379 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 18:24:36] 2026-03-07 17:24:36,382 [wrapper] pilotpid: 1657041
[2026-03-07 18:24:36] 2026-03-07 17:24:36,385 [wrapper] Pilot exit status: 0
[2026-03-07 18:24:36] 2026-03-07 17:24:36,394 [wrapper] pandaids: 7039076262
[2026-03-07 18:24:36] 2026-03-07 17:24:36,509 [wrapper] cleanup supervisor_pilot 2422031 1657042
[2026-03-07 18:24:36] 2026-03-07 17:24:36,512 [wrapper] Test setup, not cleaning
[2026-03-07 18:24:36] 2026-03-07 17:24:36,514 [wrapper] apfmon messages muted
[2026-03-07 18:24:36] 2026-03-07 17:24:36,516 [wrapper] ==== wrapper stdout END ====
[2026-03-07 18:24:36] 2026-03-07 17:24:36,518 [wrapper] ==== wrapper stderr END ====
[2026-03-07 18:24:36]  *** Error codes and diagnostics ***
[2026-03-07 18:24:36]     "exeErrorCode": 0,
[2026-03-07 18:24:36]     "exeErrorDiag": "",
[2026-03-07 18:24:36]     "pilotErrorCode": 0,
[2026-03-07 18:24:36]     "pilotErrorDiag": "",
[2026-03-07 18:24:36]  *** Listing of results directory ***
[2026-03-07 18:24:36] total 620752
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc    584627 Mar  7 11:23 pilot3.tar.gz
[2026-03-07 18:24:36] -rwx------. 1 boinc boinc     36322 Mar  7 11:26 runpilot2-wrapper.sh
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc      5111 Mar  7 11:26 queuedata.json
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc       100 Mar  7 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 18:24:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 17:06 run_atlas
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc       105 Mar  7 17:06 job.xml
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc      6702 Mar  7 17:06 init_data.xml
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc 444412668 Mar  7 17:06 EVNT.46701403._002188.pool.root.1
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:06 start_atlas.sh
[2026-03-07 18:24:36] drwxrwx--x. 2 boinc boinc      4096 Mar  7 17:06 shared
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc    597961 Mar  7 17:06 input.tar.gz
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc         0 Mar  7 17:06 boinc_lockfile
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc      2570 Mar  7 17:06 pandaJob.out
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc    999177 Mar  7 17:06 agis_schedconf.cvmfs.json
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc   1521291 Mar  7 17:06 agis_ddmendpoints.agis.ALL.json
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc       444 Mar  7 17:06 workernode_map.json
[2026-03-07 18:24:36] drwx------. 5 boinc boinc      4096 Mar  7 17:06 pilot3
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc 185325304 Mar  7 18:23 HITS.48955015._006991.pool.root.1
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc       530 Mar  7 18:23 boinc_task_state.xml
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc      1030 Mar  7 18:23 memory_monitor_summary.json
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc    299744 Mar  7 18:23 log.48955015._006991.job.log.tgz.1
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc      6348 Mar  7 18:24 heartbeat.json
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc      8192 Mar  7 18:24 boinc_mmap_file
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc        27 Mar  7 18:24 wrapper_checkpoint.txt
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc        95 Mar  7 18:24 pilot_heartbeat.json
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc      5015 Mar  7 18:24 pilotlog.txt
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc    687591 Mar  7 18:24 log.48955015._006991.job.log.1
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc       357 Mar  7 18:24 output.list
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc       620 Mar  7 18:24 runtime_log
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc   1003520 Mar  7 18:24 result.tar.gz
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc      9204 Mar  7 18:24 runtime_log.err
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc       662 Mar  7 18:24 OHZKDmz23I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYaVLDmNwPTim.diag
[2026-03-07 18:24:36] -rw-r--r--. 1 boinc boinc     21764 Mar  7 18:24 stderr.txt
[2026-03-07 18:24:36] HITS file was successfully produced:
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc 185325304 Mar  7 18:23 shared/HITS.pool.root.1
[2026-03-07 18:24:36]  *** Contents of shared directory: ***
[2026-03-07 18:24:36] total 616572
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc 444412668 Mar  7 17:06 ATLAS.root_0
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc     15845 Mar  7 17:06 start_atlas.sh
[2026-03-07 18:24:36] -rw-r--r--. 2 boinc boinc    597961 Mar  7 17:06 input.tar.gz
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc 185325304 Mar  7 18:23 HITS.pool.root.1
[2026-03-07 18:24:36] -rw-------. 1 boinc boinc   1003520 Mar  7 18:24 result.tar.gz
18:24:38 (1652502): run_atlas exited; CPU time 17845.482949
18:24:38 (1652502): called boinc_finish(0)

</stderr_txt>
]]>

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