Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:07:26 (2515331): wrapper (7.7.26015): starting
05:07:26 (2515331): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 05:07:26] Arguments: --nthreads 4
[2026-03-07 05:07:26] Threads: 4
[2026-03-07 05:07:26] Checking for CVMFS
[2026-03-07 05:07:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 05:07:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 05:07:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 05:07:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 05:07:27] 2.13.3.0 9162 6954 51420 156995 0 188 3794029 4096001 2748 130560 2 5870900 99.991 241253 73 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 05:07:27] CVMFS is ok
[2026-03-07 05:07:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 05:07:27] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 05:07:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 05:07:27] Further information can be found at the LHC@home message board.
[2026-03-07 05:07:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 05:07:27] Checking for apptainer binary...
[2026-03-07 05:07:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 05:07:27] Running /usr/bin/apptainer --version
[2026-03-07 05:07:28] apptainer version 1.4.5
[2026-03-07 05:07:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 05:07:28] SETI64-Ubuntu
[2026-03-07 05:07:28] apptainer works
[2026-03-07 05:07:28] Set ATHENA_PROC_NUMBER=4
[2026-03-07 05:07:28] Set ATHENA_CORE_NUMBER=4
[2026-03-07 05:07:28] Starting ATLAS job with PandaID=7039031024
[2026-03-07 05:07:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/84 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 07:34:09]  *** The last 200 lines of the pilot log: ***
[2026-03-07 07:34:09] 2026-03-07 12:33:12,579 | INFO     | current chi2=1.400644828266945 (change=-0.1260343126335595 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,579 | INFO     | right removable region: 137
[2026-03-07 07:34:09] 2026-03-07 12:33:12,579 | INFO     | sum of square deviations: 814878534.5
[2026-03-07 07:34:09] 2026-03-07 12:33:12,580 | INFO     | sum of deviations: -3300956989.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,580 | INFO     | mean x: 1772882576.5
[2026-03-07 07:34:09] 2026-03-07 12:33:12,580 | INFO     | mean y: 2324871.231884058
[2026-03-07 07:34:09] 2026-03-07 12:33:12,581 | INFO     | intersect: 7184019913.873853
[2026-03-07 07:34:09] 2026-03-07 12:33:12,581 | INFO     | chi2: 0.03563227710140237
[2026-03-07 07:34:09] 2026-03-07 12:33:12,581 | INFO     | current chi2=0.03563227710140237 (change=97.45280278933618 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,581 | INFO     | sum of square deviations: 729472282.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | sum of deviations: 68505257.00000003
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | mean x: 1772882729.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | mean y: 2318845.360902256
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | intersect: -164173823.3502667
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | chi2: 0.013900173281831954
[2026-03-07 07:34:09] 2026-03-07 12:33:12,582 | INFO     | current chi2=0.013900173281831954 (change=60.9899383015157 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,583 | INFO     | sum of square deviations: 650252192.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,583 | INFO     | sum of deviations: 1168455305.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,583 | INFO     | mean x: 1772882881.5
[2026-03-07 07:34:09] 2026-03-07 12:33:12,584 | INFO     | mean y: 2316799.984375
[2026-03-07 07:34:09] 2026-03-07 12:33:12,584 | INFO     | intersect: -3183423184.4682436
[2026-03-07 07:34:09] 2026-03-07 12:33:12,584 | INFO     | chi2: 0.0007697930471172738
[2026-03-07 07:34:09] 2026-03-07 12:33:12,584 | INFO     | current chi2=0.0007697930471172738 (change=94.46198956294005 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,584 | INFO     | sum of square deviations: 576985702.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | sum of deviations: 687347572.9999998
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | mean x: 1772883034.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | mean y: 2317801.4959349595
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | intersect: -2109670149.6938436
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | chi2: 0.0004175037856078738
[2026-03-07 07:34:09] 2026-03-07 12:33:12,585 | INFO     | current chi2=0.0004175037856078738 (change=45.76415217423114 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,586 | INFO     | sum of square deviations: 509440249.5
[2026-03-07 07:34:09] 2026-03-07 12:33:12,586 | INFO     | sum of deviations: 402929186.50000006
[2026-03-07 07:34:09] 2026-03-07 12:33:12,586 | INFO     | mean x: 1772883186.5
[2026-03-07 07:34:09] 2026-03-07 12:33:12,586 | INFO     | mean y: 2318441.7372881356
[2026-03-07 07:34:09] 2026-03-07 12:33:12,586 | INFO     | intersect: -1399899739.486284
[2026-03-07 07:34:09] 2026-03-07 12:33:12,587 | INFO     | chi2: 0.0002784016120480226
[2026-03-07 07:34:09] 2026-03-07 12:33:12,587 | INFO     | current chi2=0.0002784016120480226 (change=33.31758378126376 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,587 | INFO     | sum of square deviations: 447383272.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | sum of deviations: 236827315.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | mean x: 1772883339.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | mean y: 2318849.115044248
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | intersect: -936176680.9181055
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | chi2: 0.00023019224385996629
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | current chi2=0.00023019224385996629 (change=17.316483131477163 %)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | left removable region: 60
[2026-03-07 07:34:09] 2026-03-07 12:33:12,588 | INFO     | sum of square deviations: 141539398.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | sum of deviations: 190901452.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | mean x: 1772884071.0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | mean y: 2318936.4155844157
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | intersect: -2388860821.0507507
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | chi2: 0.00014590597730320957
[2026-03-07 07:34:09] 2026-03-07 12:33:12,589 | INFO     | current memory leak: 1.35 B/s (using 77 data points, chi2=0.00)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | could have reported an average CPU frequency of 2494 MHz (8 samples)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | ..............................
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | . Timing measurements:
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | . get job = 0 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | . initial setup = 8 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | . payload setup = 7 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,590 | INFO     | . stage-in = 0 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,591 | INFO     | . payload execution = 8696 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,591 | INFO     | . stage-out = 0 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,591 | INFO     | . log creation = 0 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,591 | INFO     | ..............................
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | 
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | job summary report
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | --------------------------------------------------
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | PanDA job id: 7039031024
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | task id: 48955015
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | errors: (none)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 07:34:09] 2026-03-07 12:33:12,687 | INFO     | pilot state: finished 
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | transexitcode: 0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | exeerrorcode: 0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | exeerrordiag: 
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | exitcode: 0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | exitmsg: OK
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | cpuconsumptiontime: 33827 s
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | nevents: 400
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | neventsw: 0
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | pid: 2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | pgrp: 2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | corecount: 4
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | event service: False
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | sizes: {0: 2295391, 1: 2295852, 11: 2295852, 8707: 2323834, 8708: 2332862, 8710: 2332918, 8712: 2333240}
[2026-03-07 07:34:09] 2026-03-07 12:33:12,688 | INFO     | --------------------------------------------------
[2026-03-07 07:34:09] 2026-03-07 12:33:12,689 | INFO     | 
[2026-03-07 07:34:09] 2026-03-07 12:33:12,689 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 07:34:09] 2026-03-07 12:33:12,720 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,720 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,720 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,720 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | job 7039031024 has completed (purged errors)
[2026-03-07 07:34:09] 2026-03-07 12:33:12,722 | INFO     | overall cleanup function is called
[2026-03-07 07:34:09] 2026-03-07 12:33:13,732 | INFO     | --- collectZombieJob: --- 10, [2524871]
[2026-03-07 07:34:09] 2026-03-07 12:33:13,732 | INFO     | zombie collector waiting for pid 2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:13,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 07:34:09] 2026-03-07 12:33:13,732 | INFO     | collected zombie processes
[2026-03-07 07:34:09] 2026-03-07 12:33:13,732 | INFO     | will attempt to kill all subprocesses of pid=2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:14,234 | INFO     | process IDs to be killed: [2524871] (in reverse order)
[2026-03-07 07:34:09] 2026-03-07 12:33:14,397 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 07:34:09] 2026-03-07 12:33:14,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 07:34:09] 2026-03-07 12:33:14,413 | INFO     | did not find any defunct processes belonging to 2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:14,428 | INFO     | did not find any defunct processes belonging to 2524871
[2026-03-07 07:34:09] 2026-03-07 12:33:14,428 | INFO     | ready for new job
[2026-03-07 07:34:09] 2026-03-07 12:33:14,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 07:34:09] 2026-03-07 12:33:14,431 | INFO     | **************************************
[2026-03-07 07:34:09] 2026-03-07 12:33:14,431 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 07:34:09] 2026-03-07 12:33:14,431 | INFO     | **************************************
[2026-03-07 07:34:09] 2026-03-07 12:33:14,431 | INFO     | 
[2026-03-07 07:34:09] 2026-03-07 12:33:14,440 | INFO     | architecture information:
[2026-03-07 07:34:09] 2026-03-07 12:33:14,440 | INFO     | executing command: cat /etc/os-release
[2026-03-07 07:34:09] 2026-03-07 12:33:14,462 | INFO     | cat /etc/os-release:
[2026-03-07 07:34:09] NAME="CentOS Linux"
[2026-03-07 07:34:09] VERSION="7 (Core)"
[2026-03-07 07:34:09] ID="centos"
[2026-03-07 07:34:09] ID_LIKE="rhel fedora"
[2026-03-07 07:34:09] VERSION_ID="7"
[2026-03-07 07:34:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 07:34:09] ANSI_COLOR="0;31"
[2026-03-07 07:34:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 07:34:09] HOME_URL="https://www.centos.org/"
[2026-03-07 07:34:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 07:34:09] 
[2026-03-07 07:34:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 07:34:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 07:34:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 07:34:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 07:34:09] 
[2026-03-07 07:34:09] 2026-03-07 12:33:14,463 | INFO     | **************************************
[2026-03-07 07:34:09] 2026-03-07 12:33:14,965 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/84
[2026-03-07 07:34:09] 2026-03-07 12:33:14,990 | INFO     | sufficient remaining disk space (379633795072 B)
[2026-03-07 07:34:09] 2026-03-07 12:33:14,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 07:34:09] 2026-03-07 12:33:14,991 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 07:34:09] 2026-03-07 12:33:14,991 | INFO     | update_server=False
[2026-03-07 07:34:09] 2026-03-07 12:33:14,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 07:34:09] 2026-03-07 12:33:14,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 07:34:09] 2026-03-07 12:33:15,140 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 07:34:09] 2026-03-07 12:33:15,140 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 07:34:09] 2026-03-07 12:33:15,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:34:09] 2026-03-07 12:33:15,140 | INFO     | will abort loop
[2026-03-07 07:34:09] 2026-03-07 12:33:15,272 | INFO     | all data control threads have been joined
[2026-03-07 07:34:09] 2026-03-07 12:33:15,996 | INFO     | [job] retrieve thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,114 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,114 | INFO     | all job control threads have been joined
[2026-03-07 07:34:09] 2026-03-07 12:33:16,145 | INFO     | [job] job monitor thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,277 | INFO     | [data] control thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 07:34:09] 2026-03-07 12:33:16,395 | INFO     | all payload control threads have been joined
[2026-03-07 07:34:09] 2026-03-07 12:33:16,648 | INFO     | [job] validate thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,716 | INFO     | [payload] validate_post thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,873 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:16,875 | INFO     | [payload] failed_post thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,000 | INFO     | [data] copytool_out thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,017 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,120 | INFO     | [job] control thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,351 | INFO     | [data] copytool_in thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,400 | INFO     | [payload] control thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:17,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 07:34:09] 2026-03-07 12:33:18,703 | INFO     | [job] queue monitor thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:20,329 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 07:34:09] 2026-03-07 12:33:44,494 | INFO     | PID=2519897 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 07:34:09] 2026-03-07 12:33:44,494 | INFO     | .. there are 4 such processes running
[2026-03-07 07:34:09] 2026-03-07 12:33:44,494 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 07:34:09] 2026-03-07 12:33:44,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 07:34:09] 2026-03-07 12:33:44,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 07:34:09] 2026-03-07 12:34:02,396 | INFO     | [monitor] cgroup control has ended
[2026-03-07 07:34:09] 2026-03-07 12:34:03,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134255217968960)>', '<ExcThread(monitor, started 134254369437440)>']
[2026-03-07 07:34:09] 2026-03-07 12:34:04,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 07:34:09] 2026-03-07 12:34:04,580 | INFO     | [monitor] control thread has ended
[2026-03-07 07:34:09] 2026-03-07 12:34:08,870 | INFO     | all workflow threads have been joined
[2026-03-07 07:34:09] 2026-03-07 12:34:08,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 07:34:09] 2026-03-07 12:34:08,870 | INFO     | traces error code: 0
[2026-03-07 07:34:09] 2026-03-07 12:34:08,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 07:34:09] 2026-03-07 12:34:08,993 [wrapper] ==== pilot stdout END ====
[2026-03-07 07:34:09] 2026-03-07 12:34:08,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 07:34:09] 2026-03-07 12:34:09,002 [wrapper] pilotpid: 2519897
[2026-03-07 07:34:09] 2026-03-07 12:34:09,008 [wrapper] Pilot exit status: 0
[2026-03-07 07:34:09] 2026-03-07 12:34:09,024 [wrapper] pandaids: 7039031024
[2026-03-07 07:34:09] 2026-03-07 12:34:09,106 [wrapper] cleanup supervisor_pilot 2581698 2519898
[2026-03-07 07:34:09] 2026-03-07 12:34:09,109 [wrapper] Test setup, not cleaning
[2026-03-07 07:34:09] 2026-03-07 12:34:09,113 [wrapper] apfmon messages muted
[2026-03-07 07:34:09] 2026-03-07 12:34:09,116 [wrapper] ==== wrapper stdout END ====
[2026-03-07 07:34:09] 2026-03-07 12:34:09,124 [wrapper] ==== wrapper stderr END ====
[2026-03-07 07:34:09]  *** Error codes and diagnostics ***
[2026-03-07 07:34:09]     "exeErrorCode": 0,
[2026-03-07 07:34:09]     "exeErrorDiag": "",
[2026-03-07 07:34:09]     "pilotErrorCode": 0,
[2026-03-07 07:34:09]     "pilotErrorDiag": "",
[2026-03-07 07:34:09]  *** Listing of results directory ***
[2026-03-07 07:34:09] total 612344
[2026-03-07 07:34:09] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 00:09 pilot3.tar.gz
[2026-03-07 07:34:09] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 00:33 queuedata.json
[2026-03-07 07:34:09] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 00:34 runpilot2-wrapper.sh
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 07:34:09] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 05:07 run_atlas
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 05:07 job.xml
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd 436352263 Mar  7 05:07 EVNT.46701403._002170.pool.root.1
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 05:07 start_atlas.sh
[2026-03-07 07:34:09] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 05:07 shared
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd    597962 Mar  7 05:07 input.tar.gz
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 05:07 init_data.xml
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 05:07 boinc_setup_complete
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 05:07 boinc_lockfile
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd      2570 Mar  7 05:07 pandaJob.out
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd    999153 Mar  7 05:07 agis_schedconf.cvmfs.json
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 05:07 agis_ddmendpoints.agis.ALL.json
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd       424 Mar  7 05:07 workernode_map.json
[2026-03-07 07:34:09] drwx------ 5 whitlerd whitlerd      4096 Mar  7 05:07 pilot3
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd 183588958 Mar  7 07:32 HITS.48955015._006078.pool.root.1
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 07:32 boinc_task_state.xml
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd        95 Mar  7 07:32 pilot_heartbeat.json
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd      1023 Mar  7 07:33 memory_monitor_summary.json
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd    342755 Mar  7 07:33 log.48955015._006078.job.log.tgz.1
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd      6281 Mar  7 07:33 heartbeat.json
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd      5021 Mar  7 07:34 pilotlog.txt
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 07:34 boinc_mmap_file
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 07:34 wrapper_checkpoint.txt
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd   1236821 Mar  7 07:34 log.48955015._006078.job.log.1
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd       357 Mar  7 07:34 output.list
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 07:34 runtime_log
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd   1597440 Mar  7 07:34 result.tar.gz
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 07:34 runtime_log.err
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd       648 Mar  7 07:34 RqnKDmnTzI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsbSLDmDunUTn.diag
[2026-03-07 07:34:09] -rw-rw-r-- 1 whitlerd whitlerd     21078 Mar  7 07:34 stderr.txt
[2026-03-07 07:34:09] HITS file was successfully produced:
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd 183588958 Mar  7 07:32 shared/HITS.pool.root.1
[2026-03-07 07:34:09]  *** Contents of shared directory: ***
[2026-03-07 07:34:09] total 607584
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd 436352263 Mar  7 05:07 ATLAS.root_0
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 05:07 start_atlas.sh
[2026-03-07 07:34:09] -rw-r--r-- 2 whitlerd whitlerd    597962 Mar  7 05:07 input.tar.gz
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd 183588958 Mar  7 07:32 HITS.pool.root.1
[2026-03-07 07:34:09] -rw------- 1 whitlerd whitlerd   1597440 Mar  7 07:34 result.tar.gz
07:34:11 (2515331): run_atlas exited; CPU time 34271.916862
07:34:11 (2515331): called boinc_finish(0)

</stderr_txt>
]]>

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