Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
08:33:04 (2600306): wrapper (7.7.26015): starting
08:33:04 (2600306): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 08:33:04] Arguments: --nthreads 4
[2026-03-07 08:33:04] Threads: 4
[2026-03-07 08:33:04] Checking for CVMFS
[2026-03-07 08:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 08:33:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 08:33:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 08:33:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 08:33:06] 2.13.3.0 9162 7160 51140 157002 3 50 3843890 4096000 2748 130560 2 6073747 99.991 249548 76 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 08:33:06] CVMFS is ok
[2026-03-07 08:33:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 08:33:06] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 08:33:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 08:33:06] Further information can be found at the LHC@home message board.
[2026-03-07 08:33:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 08:33:06] Checking for apptainer binary...
[2026-03-07 08:33:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 08:33:06] Running /usr/bin/apptainer --version
[2026-03-07 08:33:06] apptainer version 1.4.5
[2026-03-07 08:33:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 08:33:06] SETI64-Ubuntu
[2026-03-07 08:33:06] apptainer works
[2026-03-07 08:33:06] Set ATHENA_PROC_NUMBER=4
[2026-03-07 08:33:06] Set ATHENA_CORE_NUMBER=4
[2026-03-07 08:33:06] Starting ATLAS job with PandaID=7039062612
[2026-03-07 08:33:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/87 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 11:03:04]  *** The last 200 lines of the pilot log: ***
[2026-03-07 11:03:04] 2026-03-07 16:02:32,549 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 11:03:04] 2026-03-07 16:02:32,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 11:03:04] 2026-03-07 16:02:32,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 11:03:04] 2026-03-07 16:02:32,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 11:03:04] 2026-03-07 16:02:32,553 | INFO     | fitting pss+swap vs Time
[2026-03-07 11:03:04] 2026-03-07 16:02:32,553 | INFO     | sum of square deviations: 984941258.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,554 | INFO     | sum of deviations: -34171412490.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,554 | INFO     | mean x: 1772894886.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,554 | INFO     | mean y: 2380167.2721088436
[2026-03-07 11:03:04] 2026-03-07 16:02:32,554 | INFO     | intersect: 61510944214.97446
[2026-03-07 11:03:04] 2026-03-07 16:02:32,554 | INFO     | chi2: 2.2919516001482
[2026-03-07 11:03:04] 2026-03-07 16:02:32,555 | INFO     | sum of square deviations: 887813855.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,555 | INFO     | sum of deviations: -24324592593.000008
[2026-03-07 11:03:04] 2026-03-07 16:02:32,555 | INFO     | mean x: 1772894733.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,556 | INFO     | mean y: 2395265.267605634
[2026-03-07 11:03:04] 2026-03-07 16:02:32,556 | INFO     | intersect: 48576701506.94669
[2026-03-07 11:03:04] 2026-03-07 16:02:32,556 | INFO     | chi2: 1.631836364298665
[2026-03-07 11:03:04] 2026-03-07 16:02:32,556 | INFO     | current chi2=1.631836364298665 (change=28.80144745669373 %)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,556 | INFO     | sum of square deviations: 797291228.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,557 | INFO     | sum of deviations: -23011536605.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,557 | INFO     | mean x: 1772894581.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,557 | INFO     | mean y: 2397478.9124087594
[2026-03-07 11:03:04] 2026-03-07 16:02:32,557 | INFO     | intersect: 51171941448.21798
[2026-03-07 11:03:04] 2026-03-07 16:02:32,558 | INFO     | chi2: 1.624105265367122
[2026-03-07 11:03:04] 2026-03-07 16:02:32,558 | INFO     | current chi2=1.624105265367122 (change=0.47376680043932007 %)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,558 | INFO     | right removable region: 136
[2026-03-07 11:03:04] 2026-03-07 16:02:32,558 | INFO     | sum of square deviations: 887813855.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,559 | INFO     | sum of deviations: -50308576329.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,559 | INFO     | mean x: 1772895038.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,559 | INFO     | mean y: 2404923.3450704226
[2026-03-07 11:03:04] 2026-03-07 16:02:32,559 | INFO     | intersect: 100464708835.39424
[2026-03-07 11:03:04] 2026-03-07 16:02:32,559 | INFO     | chi2: 0.9785776037273068
[2026-03-07 11:03:04] 2026-03-07 16:02:32,560 | INFO     | current chi2=0.9785776037273068 (change=57.30374046013751 %)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,560 | INFO     | sum of square deviations: 797291228.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,560 | INFO     | sum of deviations: -44711180797.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | mean x: 1772895191.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | mean y: 2395455.4817518247
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | intersect: 99424331424.57138
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | chi2: 0.974364587240332
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | current chi2=0.974364587240332 (change=0.43052451547305376 %)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | left removable region: 20
[2026-03-07 11:03:04] 2026-03-07 16:02:32,561 | INFO     | sum of square deviations: 483971865.0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,562 | INFO     | sum of deviations: -21895923281.999996
[2026-03-07 11:03:04] 2026-03-07 16:02:32,562 | INFO     | mean x: 1772895160.5
[2026-03-07 11:03:04] 2026-03-07 16:02:32,562 | INFO     | mean y: 2390342.706896552
[2026-03-07 11:03:04] 2026-03-07 16:02:32,562 | INFO     | intersect: 80211962899.85765
[2026-03-07 11:03:04] 2026-03-07 16:02:32,563 | INFO     | chi2: 0.24380997674004962
[2026-03-07 11:03:04] 2026-03-07 16:02:32,563 | INFO     | current memory leak: -45.24 B/s (using 116 data points, chi2=0.24)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,563 | INFO     | could have reported an average CPU frequency of 2499 MHz (8 samples)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,563 | INFO     | ..............................
[2026-03-07 11:03:04] 2026-03-07 16:02:32,563 | INFO     | . Timing measurements:
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . get job = 0 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . initial setup = 8 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . payload setup = 7 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . stage-in = 0 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . payload execution = 8918 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . stage-out = 0 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | . log creation = 0 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,564 | INFO     | ..............................
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | 
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | job summary report
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | --------------------------------------------------
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | PanDA job id: 7039062612
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | task id: 48955006
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | errors: (none)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | pilot state: finished 
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | transexitcode: 0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | exeerrorcode: 0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | exeerrordiag: 
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | exitcode: 0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | exitmsg: OK
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | cpuconsumptiontime: 34592 s
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | nevents: 400
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | neventsw: 0
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | pid: 2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:32,780 | INFO     | pgrp: 2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | corecount: 4
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | event service: False
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | sizes: {0: 2295612, 1: 2295818, 11: 2295846, 8926: 2323941, 8928: 2332969, 8930: 2333025, 8932: 2333347}
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | --------------------------------------------------
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | 
[2026-03-07 11:03:04] 2026-03-07 16:02:32,781 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 11:03:04] 2026-03-07 16:02:32,805 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,808 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,808 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 11:03:04] 2026-03-07 16:02:32,808 | INFO     | job 7039062612 has completed (purged errors)
[2026-03-07 11:03:04] 2026-03-07 16:02:32,809 | INFO     | overall cleanup function is called
[2026-03-07 11:03:04] 2026-03-07 16:02:33,818 | INFO     | --- collectZombieJob: --- 10, [2609850]
[2026-03-07 11:03:04] 2026-03-07 16:02:33,818 | INFO     | zombie collector waiting for pid 2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:33,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 11:03:04] 2026-03-07 16:02:33,818 | INFO     | collected zombie processes
[2026-03-07 11:03:04] 2026-03-07 16:02:33,818 | INFO     | will attempt to kill all subprocesses of pid=2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:34,312 | INFO     | process IDs to be killed: [2609850] (in reverse order)
[2026-03-07 11:03:04] 2026-03-07 16:02:34,475 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 11:03:04] 2026-03-07 16:02:34,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 11:03:04] 2026-03-07 16:02:34,491 | INFO     | did not find any defunct processes belonging to 2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:34,506 | INFO     | did not find any defunct processes belonging to 2609850
[2026-03-07 11:03:04] 2026-03-07 16:02:34,506 | INFO     | ready for new job
[2026-03-07 11:03:04] 2026-03-07 16:02:34,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 11:03:04] 2026-03-07 16:02:34,509 | INFO     | **************************************
[2026-03-07 11:03:04] 2026-03-07 16:02:34,509 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 11:03:04] 2026-03-07 16:02:34,509 | INFO     | **************************************
[2026-03-07 11:03:04] 2026-03-07 16:02:34,509 | INFO     | 
[2026-03-07 11:03:04] 2026-03-07 16:02:34,518 | INFO     | architecture information:
[2026-03-07 11:03:04] 2026-03-07 16:02:34,518 | INFO     | executing command: cat /etc/os-release
[2026-03-07 11:03:04] 2026-03-07 16:02:34,544 | INFO     | cat /etc/os-release:
[2026-03-07 11:03:04] NAME="CentOS Linux"
[2026-03-07 11:03:04] VERSION="7 (Core)"
[2026-03-07 11:03:04] ID="centos"
[2026-03-07 11:03:04] ID_LIKE="rhel fedora"
[2026-03-07 11:03:04] VERSION_ID="7"
[2026-03-07 11:03:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 11:03:04] ANSI_COLOR="0;31"
[2026-03-07 11:03:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 11:03:04] HOME_URL="https://www.centos.org/"
[2026-03-07 11:03:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 11:03:04] 
[2026-03-07 11:03:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 11:03:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 11:03:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 11:03:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 11:03:04] 
[2026-03-07 11:03:04] 2026-03-07 16:02:34,544 | INFO     | **************************************
[2026-03-07 11:03:04] 2026-03-07 16:02:35,047 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 11:03:04] 2026-03-07 16:02:35,070 | INFO     | sufficient remaining disk space (378392281088 B)
[2026-03-07 11:03:04] 2026-03-07 16:02:35,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 11:03:04] 2026-03-07 16:02:35,071 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 11:03:04] 2026-03-07 16:02:35,071 | INFO     | update_server=False
[2026-03-07 11:03:04] 2026-03-07 16:02:35,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 11:03:04] 2026-03-07 16:02:35,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 11:03:04] 2026-03-07 16:02:35,150 | WARNING  | process 2609850 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 11:03:04] 2026-03-07 16:02:35,509 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:03:04] 2026-03-07 16:02:35,630 | INFO     | all payload control threads have been joined
[2026-03-07 11:03:04] 2026-03-07 16:02:35,823 | INFO     | all data control threads have been joined
[2026-03-07 11:03:04] 2026-03-07 16:02:35,980 | INFO     | number of running child processes to parent process 2609850: 1
[2026-03-07 11:03:04] 2026-03-07 16:02:35,980 | INFO     | maximum number of monitored processes: 6
[2026-03-07 11:03:04] 2026-03-07 16:02:35,980 | INFO     | aborting job monitoring since job object (job id=7039062612) has expired
[2026-03-07 11:03:04] 2026-03-07 16:02:35,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:03:04] 2026-03-07 16:02:35,981 | INFO     | will abort loop
[2026-03-07 11:03:04] 2026-03-07 16:02:36,075 | INFO     | [job] retrieve thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:36,219 | INFO     | all job control threads have been joined
[2026-03-07 11:03:04] 2026-03-07 16:02:36,379 | INFO     | [data] copytool_in thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:36,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 11:03:04] 2026-03-07 16:02:36,618 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:36,635 | INFO     | [payload] control thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:36,829 | INFO     | [data] control thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:36,986 | INFO     | [job] job monitor thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,030 | INFO     | [job] validate thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,078 | INFO     | [data] copytool_out thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,224 | INFO     | [job] control thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,254 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,293 | INFO     | [payload] validate_post thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,360 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,600 | INFO     | [payload] failed_post thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:37,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:03:04] 2026-03-07 16:02:38,673 | INFO     | [job] queue monitor thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:40,524 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:42,584 | INFO     | [monitor] cgroup control has ended
[2026-03-07 11:03:04] 2026-03-07 16:02:45,609 | INFO     | job.realtimelogging is not enabled
[2026-03-07 11:03:04] 2026-03-07 16:02:46,614 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 11:03:04] 2026-03-07 16:02:48,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125477865523008)>', '<ExcThread(monitor, started 125477377263360)>']
[2026-03-07 11:03:04] 2026-03-07 16:02:53,664 | INFO     | all workflow threads have been joined
[2026-03-07 11:03:04] 2026-03-07 16:02:53,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 11:03:04] 2026-03-07 16:02:53,664 | INFO     | traces error code: 0
[2026-03-07 11:03:04] 2026-03-07 16:02:53,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 11:03:04] 2026-03-07 16:03:04,578 | INFO     | PID=2604876 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 11:03:04] 2026-03-07 16:03:04,578 | INFO     | .. there are 4 such processes running
[2026-03-07 11:03:04] 2026-03-07 16:03:04,579 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 11:03:04] 2026-03-07 16:03:04,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 11:03:04] 2026-03-07 16:03:04,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 11:03:04] 2026-03-07 16:03:04,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 11:03:04] 2026-03-07 16:03:04,579 | INFO     | [monitor] control thread has ended
[2026-03-07 11:03:04] 2026-03-07 16:03:04,716 [wrapper] ==== pilot stdout END ====
[2026-03-07 11:03:04] 2026-03-07 16:03:04,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 11:03:04] 2026-03-07 16:03:04,723 [wrapper] pilotpid: 2604876
[2026-03-07 11:03:04] 2026-03-07 16:03:04,728 [wrapper] Pilot exit status: 0
[2026-03-07 11:03:04] 2026-03-07 16:03:04,741 [wrapper] pandaids: 7039062612
[2026-03-07 11:03:04] 2026-03-07 16:03:04,858 [wrapper] cleanup supervisor_pilot 2665884 2604877
[2026-03-07 11:03:04] 2026-03-07 16:03:04,862 [wrapper] Test setup, not cleaning
[2026-03-07 11:03:04] 2026-03-07 16:03:04,865 [wrapper] apfmon messages muted
[2026-03-07 11:03:04] 2026-03-07 16:03:04,867 [wrapper] ==== wrapper stdout END ====
[2026-03-07 11:03:04] 2026-03-07 16:03:04,869 [wrapper] ==== wrapper stderr END ====
[2026-03-07 11:03:04]  *** Error codes and diagnostics ***
[2026-03-07 11:03:04]     "exeErrorCode": 0,
[2026-03-07 11:03:04]     "exeErrorDiag": "",
[2026-03-07 11:03:04]     "pilotErrorCode": 0,
[2026-03-07 11:03:04]     "pilotErrorDiag": "",
[2026-03-07 11:03:04]  *** Listing of results directory ***
[2026-03-07 11:03:04] total 619904
[2026-03-07 11:03:04] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 04:08 pilot3.tar.gz
[2026-03-07 11:03:04] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 04:40 queuedata.json
[2026-03-07 11:03:04] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 04:41 runpilot2-wrapper.sh
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 11:03:04] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 08:33 run_atlas
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 08:33 job.xml
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd 440687784 Mar  7 08:33 EVNT.46701403._000315.pool.root.1
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 08:33 start_atlas.sh
[2026-03-07 11:03:04] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 08:33 shared
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd    597962 Mar  7 08:33 input.tar.gz
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 08:33 init_data.xml
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 08:33 boinc_setup_complete
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 08:33 boinc_lockfile
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  7 08:33 pandaJob.out
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd    999177 Mar  7 08:33 agis_schedconf.cvmfs.json
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 08:33 agis_ddmendpoints.agis.ALL.json
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd       419 Mar  7 08:33 workernode_map.json
[2026-03-07 11:03:04] drwx------ 5 whitlerd whitlerd      4096 Mar  7 08:33 pilot3
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd 186952729 Mar  7 11:01 HITS.48955006._015726.pool.root.1
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  7 11:02 boinc_task_state.xml
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd      1022 Mar  7 11:02 memory_monitor_summary.json
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd    341226 Mar  7 11:02 log.48955006._015726.job.log.tgz.1
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd      6286 Mar  7 11:02 heartbeat.json
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 11:03 boinc_mmap_file
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 11:03 wrapper_checkpoint.txt
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd       823 Mar  7 11:03 pilotlog.txt
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd        95 Mar  7 11:03 pilot_heartbeat.json
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd   1263724 Mar  7 11:03 log.48955006._015726.job.log.1
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd       357 Mar  7 11:03 output.list
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 11:03 runtime_log
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd   1617920 Mar  7 11:03 result.tar.gz
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd       648 Mar  7 11:03 UXlLDm9K3I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmj7SLDmWhEqen.diag
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 11:03 runtime_log.err
[2026-03-07 11:03:04] -rw-rw-r-- 1 whitlerd whitlerd     21160 Mar  7 11:03 stderr.txt
[2026-03-07 11:03:04] HITS file was successfully produced:
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd 186952729 Mar  7 11:01 shared/HITS.pool.root.1
[2026-03-07 11:03:04]  *** Contents of shared directory: ***
[2026-03-07 11:03:04] total 615120
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd 440687784 Mar  7 08:33 ATLAS.root_0
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 08:33 start_atlas.sh
[2026-03-07 11:03:04] -rw-r--r-- 2 whitlerd whitlerd    597962 Mar  7 08:33 input.tar.gz
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd 186952729 Mar  7 11:01 HITS.pool.root.1
[2026-03-07 11:03:04] -rw------- 1 whitlerd whitlerd   1617920 Mar  7 11:03 result.tar.gz
11:03:06 (2600306): run_atlas exited; CPU time 35039.760618
11:03:06 (2600306): called boinc_finish(0)

</stderr_txt>
]]>

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