Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:51 (3190641): wrapper (7.7.26015): starting
19:47:51 (3190641): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 19:47:51] Arguments: --nthreads 4
[2026-03-07 19:47:51] Threads: 4
[2026-03-07 19:47:51] Checking for CVMFS
[2026-03-07 19:47:51] No cvmfs_config command found, will try listing directly
[2026-03-07 19:47:51] CVMFS is ok
[2026-03-07 19:47:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 19:47:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 19:47:51] Further information can be found at the LHC@home message board.
[2026-03-07 19:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:47:51] Checking for apptainer binary...
[2026-03-07 19:47:51] which: no apptainer in ((null))
[2026-03-07 19:47:51] apptainer is not installed, using version from CVMFS
[2026-03-07 19:47:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:47:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 19:47:51] apptainer works
[2026-03-07 19:47:51] Set ATHENA_PROC_NUMBER=4
[2026-03-07 19:47:51] Set ATHENA_CORE_NUMBER=4
[2026-03-07 19:47:51] Starting ATLAS job with PandaID=7044330110
[2026-03-07 19:47:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 21:26:17]  *** The last 200 lines of the pilot log: ***
[2026-03-07 21:26:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/27/log.48967011._002784.job.log.tgz.1
[2026-03-07 21:26:17]  workdir=None
[2026-03-07 21:26:17] ]
[2026-03-07 21:26:17] 2026-03-07 20:25:29,222 | INFO     | transferring file log.48967011._002784.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/log.48967011._002784.job.log.tgz.1 to /var/lib/
[2026-03-07 21:26:17] 2026-03-07 20:25:29,222 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/log.48967011._002784.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/0/
[2026-03-07 21:26:17] 2026-03-07 20:25:29,239 | INFO     | adding to output.list: log.48967011._002784.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/27/log.48967011._002784.job.log.tg
[2026-03-07 21:26:17] 2026-03-07 20:25:29,240 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 21:26:17] 2026-03-07 20:25:29,240 | INFO     | summary of transferred files:
[2026-03-07 21:26:17] 2026-03-07 20:25:29,240 | INFO     |  -- lfn=log.48967011._002784.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 21:26:17] 2026-03-07 20:25:29,240 | INFO     | stage-out finished correctly
[2026-03-07 21:26:17] 2026-03-07 20:25:29,866 | INFO     | time since job start (5847s) is within the limit (349056.0s)
[2026-03-07 21:26:17] 2026-03-07 20:25:30,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 21:26:17] 2026-03-07 20:25:31,871 | INFO     | time since job start (5849s) is within the limit (349056.0s)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,466 | WARNING  | process 3208102 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 21:26:17] 2026-03-07 20:25:32,466 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,466 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,467 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 21:26:17] 2026-03-07 20:25:32,467 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 21:26:17] 2026-03-07 20:25:32,467 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2718396 B
[2026-03-07 21:26:17] 2026-03-07 20:25:32,467 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16092 B
[2026-03-07 21:26:17] 2026-03-07 20:25:32,467 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/0
[2026-03-07 21:26:17] 2026-03-07 20:25:32,483 | INFO     | sufficient remaining disk space (20843593728 B)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,483 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,484 | INFO     | size of work directory /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110: 3025639 B (within 5033164800 B limit)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,484 | INFO     | pfn file=/var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/HITS.48967011._002784.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,484 | INFO     | total size of present files: 0 B (workdir size: 3025639 B)
[2026-03-07 21:26:17] 2026-03-07 20:25:32,484 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/HITS.48967011._002784.pool.root.1 since it does not exist
[2026-03-07 21:26:17] 2026-03-07 20:25:32,916 | INFO     | number of running child processes to parent process 3208102: 1
[2026-03-07 21:26:17] 2026-03-07 20:25:32,916 | INFO     | maximum number of monitored processes: 6
[2026-03-07 21:26:17] 2026-03-07 20:25:33,542 | INFO     | job 7044330110 has state=finished
[2026-03-07 21:26:17] 2026-03-07 20:25:33,542 | INFO     | preparing for final server update for job 7044330110 in state='finished'
[2026-03-07 21:26:17] 2026-03-07 20:25:33,542 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/jobReport.json
[2026-03-07 21:26:17] 2026-03-07 20:25:33,544 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/0/workernode_map.json
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | INFO     | this job has now completed (state=finished)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | INFO     | log transfer has been attempted: DONE
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | INFO     | job 7044330110 has finished - writing final server update
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19056/.job.ad'
[2026-03-07 21:26:17] 2026-03-07 20:25:33,545 | INFO     | total number of processed events: 400 (read)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,562 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7044330110/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,562 | INFO     | extracted standard info from prmon json
[2026-03-07 21:26:17] 2026-03-07 20:25:33,562 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 21:26:17] 2026-03-07 20:25:33,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 21:26:17] 2026-03-07 20:25:33,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 21:26:17] 2026-03-07 20:25:33,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | fitting pss+swap vs Time
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | sum of square deviations: 218571540.0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | sum of deviations: 444658523.99999976
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | mean x: 1772912291.0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | mean y: 2338730.7191011235
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | intersect: -3604446317.771284
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | chi2: 7.396956817802425e-05
[2026-03-07 21:26:17] 2026-03-07 20:25:33,564 | INFO     | current memory leak: 2.03 B/s (using 89 data points, chi2=0.00)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | could have reported an average CPU frequency of 3617 MHz (7 samples)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | ..............................
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . Timing measurements:
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . get job = 0 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . initial setup = 4 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . payload setup = 4 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . stage-in = 0 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . payload execution = 5827 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . stage-out = 0 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | . log creation = 0 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,565 | INFO     | ..............................
[2026-03-07 21:26:17] 2026-03-07 20:25:33,615 | INFO     | 
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | job summary report
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | --------------------------------------------------
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | PanDA job id: 7044330110
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | task id: 48967011
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | errors: (none)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | pilot state: finished 
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | transexitcode: 0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | exeerrorcode: 0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | exeerrordiag: 
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | exitcode: 0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | exitmsg: OK
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | cpuconsumptiontime: 22473 s
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | nevents: 400
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | neventsw: 0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | pid: 3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | pgrp: 3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | corecount: 4
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | event service: False
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | sizes: {0: 2295827, 11: 2295827, 5835: 2322559, 5836: 2331581, 5837: 2331637, 5840: 2331859}
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | --------------------------------------------------
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | 
[2026-03-07 21:26:17] 2026-03-07 20:25:33,616 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/0
[2026-03-07 21:26:17] 2026-03-07 20:25:33,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | job 7044330110 has completed (purged errors)
[2026-03-07 21:26:17] 2026-03-07 20:25:33,640 | INFO     | overall cleanup function is called
[2026-03-07 21:26:17] 2026-03-07 20:25:34,648 | INFO     | --- collectZombieJob: --- 10, [3208102]
[2026-03-07 21:26:17] 2026-03-07 20:25:34,649 | INFO     | zombie collector waiting for pid 3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:34,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 21:26:17] 2026-03-07 20:25:34,649 | INFO     | collected zombie processes
[2026-03-07 21:26:17] 2026-03-07 20:25:34,649 | INFO     | will attempt to kill all subprocesses of pid=3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:35,067 | INFO     | process IDs to be killed: [3208102] (in reverse order)
[2026-03-07 21:26:17] 2026-03-07 20:25:35,270 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 21:26:17] 2026-03-07 20:25:35,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 21:26:17] 2026-03-07 20:25:35,296 | INFO     | did not find any defunct processes belonging to 3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:35,321 | INFO     | did not find any defunct processes belonging to 3208102
[2026-03-07 21:26:17] 2026-03-07 20:25:35,322 | INFO     | ready for new job
[2026-03-07 21:26:17] 2026-03-07 20:25:35,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 21:26:17] 2026-03-07 20:25:35,323 | INFO     | **************************************
[2026-03-07 21:26:17] 2026-03-07 20:25:35,323 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 21:26:17] 2026-03-07 20:25:35,323 | INFO     | **************************************
[2026-03-07 21:26:17] 2026-03-07 20:25:35,323 | INFO     | 
[2026-03-07 21:26:17] 2026-03-07 20:25:35,328 | INFO     | architecture information:
[2026-03-07 21:26:17] 2026-03-07 20:25:35,329 | INFO     | executing command: cat /etc/os-release
[2026-03-07 21:26:17] 2026-03-07 20:25:35,341 | INFO     | cat /etc/os-release:
[2026-03-07 21:26:17] NAME="CentOS Linux"
[2026-03-07 21:26:17] VERSION="7 (Core)"
[2026-03-07 21:26:17] ID="centos"
[2026-03-07 21:26:17] ID_LIKE="rhel fedora"
[2026-03-07 21:26:17] VERSION_ID="7"
[2026-03-07 21:26:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 21:26:17] ANSI_COLOR="0;31"
[2026-03-07 21:26:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 21:26:17] HOME_URL="https://www.centos.org/"
[2026-03-07 21:26:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 21:26:17] 
[2026-03-07 21:26:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 21:26:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 21:26:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 21:26:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 21:26:17] 
[2026-03-07 21:26:17] 2026-03-07 20:25:35,342 | INFO     | **************************************
[2026-03-07 21:26:17] 2026-03-07 20:25:35,842 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/0
[2026-03-07 21:26:17] 2026-03-07 20:25:35,857 | INFO     | sufficient remaining disk space (20698890240 B)
[2026-03-07 21:26:17] 2026-03-07 20:25:35,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 21:26:17] 2026-03-07 20:25:35,857 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 21:26:17] 2026-03-07 20:25:35,857 | INFO     | update_server=False
[2026-03-07 21:26:17] 2026-03-07 20:25:35,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 21:26:17] 2026-03-07 20:25:36,182 | INFO     | all payload control threads have been joined
[2026-03-07 21:26:17] 2026-03-07 20:25:36,293 | INFO     | all job control threads have been joined
[2026-03-07 21:26:17] 2026-03-07 20:25:36,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:26:17] 2026-03-07 20:25:36,423 | INFO     | aborting loop
[2026-03-07 21:26:17] 2026-03-07 20:25:36,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 21:26:17] 2026-03-07 20:25:36,777 | INFO     | all data control threads have been joined
[2026-03-07 21:26:17] 2026-03-07 20:25:36,863 | INFO     | [job] retrieve thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:36,879 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,068 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,184 | INFO     | [data] copytool_in thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,187 | INFO     | [payload] control thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,192 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,221 | INFO     | [payload] failed_post thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,299 | INFO     | [job] control thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 21:26:17] 2026-03-07 20:25:37,428 | INFO     | [job] job monitor thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,743 | INFO     | [payload] validate_post thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:37,782 | INFO     | [data] control thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:38,159 | INFO     | [job] validate thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:38,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:26:17] 2026-03-07 20:25:39,306 | INFO     | [data] copytool_out thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:39,630 | INFO     | [job] queue monitor thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:40,673 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:25:46,413 | INFO     | job.realtimelogging is not enabled
[2026-03-07 21:26:17] 2026-03-07 20:25:47,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 21:26:17] 2026-03-07 20:26:05,453 | INFO     | PID=3195201 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 21:26:17] 2026-03-07 20:26:05,453 | INFO     | .. there are 50 such processes running
[2026-03-07 21:26:17] 2026-03-07 20:26:05,453 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 21:26:17] 2026-03-07 20:26:05,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 21:26:17] 2026-03-07 20:26:05,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 21:26:17] 2026-03-07 20:26:11,297 | INFO     | [monitor] cgroup control has ended
[2026-03-07 21:26:17] 2026-03-07 20:26:12,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22377160406848)>', '<ExcThread(monitor, started 22376923543296)>']
[2026-03-07 21:26:17] 2026-03-07 20:26:12,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 21:26:17] 2026-03-07 20:26:12,482 | INFO     | [monitor] control thread has ended
[2026-03-07 21:26:17] 2026-03-07 20:26:17,278 | INFO     | all workflow threads have been joined
[2026-03-07 21:26:17] 2026-03-07 20:26:17,279 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 21:26:17] 2026-03-07 20:26:17,279 | INFO     | traces error code: 0
[2026-03-07 21:26:17] 2026-03-07 20:26:17,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 21:26:17] 2026-03-07 20:26:17,397 [wrapper] ==== pilot stdout END ====
[2026-03-07 21:26:17] 2026-03-07 20:26:17,400 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 21:26:17] 2026-03-07 20:26:17,402 [wrapper] pilotpid: 3195201
[2026-03-07 21:26:17] 2026-03-07 20:26:17,404 [wrapper] Pilot exit status: 0
[2026-03-07 21:26:17] 2026-03-07 20:26:17,412 [wrapper] pandaids: 7044330110
[2026-03-07 21:26:17] 2026-03-07 20:26:17,527 [wrapper] cleanup supervisor_pilot 3990624 3195202
[2026-03-07 21:26:17] 2026-03-07 20:26:17,529 [wrapper] Test setup, not cleaning
[2026-03-07 21:26:17] 2026-03-07 20:26:17,531 [wrapper] apfmon messages muted
[2026-03-07 21:26:17] 2026-03-07 20:26:17,533 [wrapper] ==== wrapper stdout END ====
[2026-03-07 21:26:17] 2026-03-07 20:26:17,535 [wrapper] ==== wrapper stderr END ====
[2026-03-07 21:26:17]  *** Error codes and diagnostics ***
[2026-03-07 21:26:17]     "exeErrorCode": 0,
[2026-03-07 21:26:17]     "exeErrorDiag": "",
[2026-03-07 21:26:17]     "pilotErrorCode": 0,
[2026-03-07 21:26:17]     "pilotErrorDiag": "",
[2026-03-07 21:26:17]  *** Listing of results directory ***
[2026-03-07 21:26:17] total 418908
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc      5111 Mar  7 03:33 queuedata.json
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc    584627 Mar  7 03:33 pilot3.tar.gz
[2026-03-07 21:26:17] -rwx------. 1 boinc boinc     36322 Mar  7 03:33 runpilot2-wrapper.sh
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 21:26:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:47 run_atlas
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:47 job.xml
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc    597953 Mar  7 19:47 input.tar.gz
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc      6705 Mar  7 19:47 init_data.xml
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc 216437552 Mar  7 19:47 EVNT.48967008._000110.pool.root.1
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:47 start_atlas.sh
[2026-03-07 21:26:17] drwxrwx--x. 2 boinc boinc      4096 Mar  7 19:47 shared
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:47 boinc_lockfile
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc      2563 Mar  7 19:47 pandaJob.out
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc    999177 Mar  7 19:47 agis_schedconf.cvmfs.json
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc   1521291 Mar  7 19:47 agis_ddmendpoints.agis.ALL.json
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc       445 Mar  7 19:48 workernode_map.json
[2026-03-07 21:26:17] drwx------. 5 boinc boinc      4096 Mar  7 19:48 pilot3
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc       529 Mar  7 21:25 boinc_task_state.xml
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc 206293199 Mar  7 21:25 HITS.48967011._002784.pool.root.1
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc        95 Mar  7 21:25 pilot_heartbeat.json
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc      1030 Mar  7 21:25 memory_monitor_summary.json
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc    294751 Mar  7 21:25 log.48967011._002784.job.log.tgz.1
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc      6351 Mar  7 21:25 heartbeat.json
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc      8192 Mar  7 21:26 boinc_mmap_file
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc        27 Mar  7 21:26 wrapper_checkpoint.txt
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc      4902 Mar  7 21:26 pilotlog.txt
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc    851643 Mar  7 21:26 log.48967011._002784.job.log.1
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc       357 Mar  7 21:26 output.list
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc       620 Mar  7 21:26 runtime_log
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc   1167360 Mar  7 21:26 result.tar.gz
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc      9221 Mar  7 21:26 runtime_log.err
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc       662 Mar  7 21:26 FIBODmDfwI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmb8RLDmVH3K6n.diag
[2026-03-07 21:26:17] -rw-r--r--. 1 boinc boinc     22516 Mar  7 21:26 stderr.txt
[2026-03-07 21:26:17] HITS file was successfully produced:
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc 206293199 Mar  7 21:25 shared/HITS.pool.root.1
[2026-03-07 21:26:17]  *** Contents of shared directory: ***
[2026-03-07 21:26:17] total 414576
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc    597953 Mar  7 19:47 input.tar.gz
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc 216437552 Mar  7 19:47 ATLAS.root_0
[2026-03-07 21:26:17] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:47 start_atlas.sh
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc 206293199 Mar  7 21:25 HITS.pool.root.1
[2026-03-07 21:26:17] -rw-------. 1 boinc boinc   1167360 Mar  7 21:26 result.tar.gz
21:26:18 (3190641): run_atlas exited; CPU time 22717.938966
21:26:18 (3190641): called boinc_finish(0)

</stderr_txt>
]]>

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