Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:40 (4148219): wrapper (7.7.26015): starting
01:50:40 (4148219): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 01:50:40] Arguments: --nthreads 4
[2026-03-09 01:50:40] Threads: 4
[2026-03-09 01:50:40] Checking for CVMFS
[2026-03-09 01:50:40] No cvmfs_config command found, will try listing directly
[2026-03-09 01:50:40] CVMFS is ok
[2026-03-09 01:50:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 01:50:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 01:50:40] Further information can be found at the LHC@home message board.
[2026-03-09 01:50:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 01:50:40] Checking for apptainer binary...
[2026-03-09 01:50:40] which: no apptainer in ((null))
[2026-03-09 01:50:40] apptainer is not installed, using version from CVMFS
[2026-03-09 01:50:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 01:50:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-09 01:50:40] apptainer works
[2026-03-09 01:50:40] Set ATHENA_PROC_NUMBER=4
[2026-03-09 01:50:40] Set ATHENA_CORE_NUMBER=4
[2026-03-09 01:50:40] Starting ATLAS job with PandaID=7044315133
[2026-03-09 01:50:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 03:21:09]  *** The last 200 lines of the pilot log: ***
[2026-03-09 03:21:09]  is_tar=False
[2026-03-09 03:21:09]  lfn=log.48958577._001820.job.log.tgz.1
[2026-03-09 03:21:09]  mtime=0
[2026-03-09 03:21:09]  protocol_id=None
[2026-03-09 03:21:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 03:21:09]  replicas=None
[2026-03-09 03:21:09]  scope=mc23_13p6TeV
[2026-03-09 03:21:09]  status=None
[2026-03-09 03:21:09]  status_code=0
[2026-03-09 03:21:09]  storage_token=
[2026-03-09 03:21:09]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7044315133/log.48958577._001820.job.log.tgz.1
[2026-03-09 03:21:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/a7/log.48958577._001820.job.log.tgz.1
[2026-03-09 03:21:09]  workdir=None
[2026-03-09 03:21:09] ]
[2026-03-09 03:21:09] 2026-03-09 02:20:00,359 | INFO     | transferring file log.48958577._001820.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7044315133/log.48958577._001820.job.log.tgz.1 to /var/lib/
[2026-03-09 03:21:09] 2026-03-09 02:20:00,359 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7044315133/log.48958577._001820.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-09 03:21:09] 2026-03-09 02:20:00,381 | INFO     | adding to output.list: log.48958577._001820.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/a7/log.48958577._001820.job.log.tg
[2026-03-09 03:21:09] 2026-03-09 02:20:00,382 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 03:21:09] 2026-03-09 02:20:00,382 | INFO     | summary of transferred files:
[2026-03-09 03:21:09] 2026-03-09 02:20:00,382 | INFO     |  -- lfn=log.48958577._001820.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 03:21:09] 2026-03-09 02:20:00,382 | INFO     | stage-out finished correctly
[2026-03-09 03:21:09] 2026-03-09 02:20:00,605 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 03:21:09] 2026-03-09 02:20:00,844 | INFO     | monitor loop #383: job 0:7044315133 is in state 'finished'
[2026-03-09 03:21:09] 2026-03-09 02:20:00,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 03:21:09] 2026-03-09 02:20:01,651 | INFO     | time since job start (5348s) is within the limit (349056.0s)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,346 | INFO     | monitor loop #384: job 0:7044315133 is in state 'finished'
[2026-03-09 03:21:09] 2026-03-09 02:20:03,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,409 | INFO     | job 7044315133 has state=finished
[2026-03-09 03:21:09] 2026-03-09 02:20:03,409 | INFO     | preparing for final server update for job 7044315133 in state='finished'
[2026-03-09 03:21:09] 2026-03-09 02:20:03,409 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7044315133/jobReport.json
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | this job has now completed (state=finished)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | log transfer has been attempted: DONE
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | job 7044315133 has finished - writing final server update
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_499812/.job.ad'
[2026-03-09 03:21:09] 2026-03-09 02:20:03,411 | INFO     | total number of processed events: 400 (read)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,430 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7044315133/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,430 | INFO     | extracted standard info from prmon json
[2026-03-09 03:21:09] 2026-03-09 02:20:03,430 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 03:21:09] 2026-03-09 02:20:03,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 03:21:09] 2026-03-09 02:20:03,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 03:21:09] 2026-03-09 02:20:03,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | fitting pss+swap vs Time
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | sum of square deviations: 164765880.0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | sum of deviations: 196220713.0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | mean x: 1773020219.0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | mean y: 2341006.160493827
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | intersect: -2109159818.7408519
[2026-03-09 03:21:09] 2026-03-09 02:20:03,432 | INFO     | chi2: 0.00026792493030640386
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | current memory leak: 1.19 B/s (using 81 data points, chi2=0.00)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | could have reported an average CPU frequency of 3596 MHz (6 samples)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | ..............................
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . Timing measurements:
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . get job = 0 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . initial setup = 5 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . payload setup = 4 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . stage-in = 0 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . payload execution = 5326 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . stage-out = 0 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | . log creation = 0 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,433 | INFO     | ..............................
[2026-03-09 03:21:09] 2026-03-09 02:20:03,485 | INFO     | 
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | job summary report
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | --------------------------------------------------
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | PanDA job id: 7044315133
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | task id: 48958577
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | errors: (none)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | pilot state: finished 
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | transexitcode: 0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | exeerrorcode: 0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | exeerrordiag: 
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | exitcode: 0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,486 | INFO     | exitmsg: OK
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | cpuconsumptiontime: 20359 s
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | nevents: 400
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | neventsw: 0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | pid: 4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | pgrp: 4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | corecount: 4
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | event service: False
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | sizes: {0: 2279942, 1: 2280204, 11: 2280232, 5334: 2306692, 5336: 2315770, 5339: 2315908}
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | --------------------------------------------------
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | 
[2026-03-09 03:21:09] 2026-03-09 02:20:03,490 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-09 03:21:09] 2026-03-09 02:20:03,506 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,506 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,506 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,506 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | job 7044315133 has completed (purged errors)
[2026-03-09 03:21:09] 2026-03-09 02:20:03,507 | INFO     | overall cleanup function is called
[2026-03-09 03:21:09] 2026-03-09 02:20:04,514 | INFO     | --- collectZombieJob: --- 10, [4175523]
[2026-03-09 03:21:09] 2026-03-09 02:20:04,514 | INFO     | zombie collector waiting for pid 4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:04,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 03:21:09] 2026-03-09 02:20:04,514 | INFO     | collected zombie processes
[2026-03-09 03:21:09] 2026-03-09 02:20:04,514 | INFO     | will attempt to kill all subprocesses of pid=4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:04,979 | INFO     | process IDs to be killed: [4175523] (in reverse order)
[2026-03-09 03:21:09] 2026-03-09 02:20:05,211 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 03:21:09] 2026-03-09 02:20:05,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 03:21:09] 2026-03-09 02:20:05,242 | INFO     | did not find any defunct processes belonging to 4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:05,273 | INFO     | did not find any defunct processes belonging to 4175523
[2026-03-09 03:21:09] 2026-03-09 02:20:05,273 | INFO     | ready for new job
[2026-03-09 03:21:09] 2026-03-09 02:20:05,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 03:21:09] 2026-03-09 02:20:05,275 | INFO     | **************************************
[2026-03-09 03:21:09] 2026-03-09 02:20:05,275 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 03:21:09] 2026-03-09 02:20:05,275 | INFO     | **************************************
[2026-03-09 03:21:09] 2026-03-09 02:20:05,275 | INFO     | 
[2026-03-09 03:21:09] 2026-03-09 02:20:05,282 | INFO     | architecture information:
[2026-03-09 03:21:09] 2026-03-09 02:20:05,282 | INFO     | executing command: cat /etc/os-release
[2026-03-09 03:21:09] 2026-03-09 02:20:05,298 | INFO     | cat /etc/os-release:
[2026-03-09 03:21:09] NAME="CentOS Linux"
[2026-03-09 03:21:09] VERSION="7 (Core)"
[2026-03-09 03:21:09] ID="centos"
[2026-03-09 03:21:09] ID_LIKE="rhel fedora"
[2026-03-09 03:21:09] VERSION_ID="7"
[2026-03-09 03:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 03:21:09] ANSI_COLOR="0;31"
[2026-03-09 03:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 03:21:09] HOME_URL="https://www.centos.org/"
[2026-03-09 03:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 03:21:09] 
[2026-03-09 03:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 03:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 03:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 03:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 03:21:09] 
[2026-03-09 03:21:09] 2026-03-09 02:20:05,299 | INFO     | **************************************
[2026-03-09 03:21:09] 2026-03-09 02:20:05,801 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-09 03:21:09] 2026-03-09 02:20:05,818 | INFO     | sufficient remaining disk space (21838692352 B)
[2026-03-09 03:21:09] 2026-03-09 02:20:05,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 03:21:09] 2026-03-09 02:20:05,819 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 03:21:09] 2026-03-09 02:20:05,819 | INFO     | update_server=False
[2026-03-09 03:21:09] 2026-03-09 02:20:05,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 03:21:09] 2026-03-09 02:20:05,850 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 03:21:09] 2026-03-09 02:20:05,851 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 03:21:09] 2026-03-09 02:20:05,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:21:09] 2026-03-09 02:20:05,851 | INFO     | will abort loop
[2026-03-09 03:21:09] 2026-03-09 02:20:05,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 03:21:09] 2026-03-09 02:20:06,090 | INFO     | all job control threads have been joined
[2026-03-09 03:21:09] 2026-03-09 02:20:06,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 03:21:09] 2026-03-09 02:20:06,694 | INFO     | all data control threads have been joined
[2026-03-09 03:21:09] 2026-03-09 02:20:06,824 | INFO     | [job] retrieve thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:06,856 | INFO     | [job] job monitor thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,031 | INFO     | [job] validate thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,084 | INFO     | all payload control threads have been joined
[2026-03-09 03:21:09] 2026-03-09 02:20:07,096 | INFO     | [job] control thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,096 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,130 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,191 | INFO     | [payload] failed_post thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,355 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,427 | INFO     | [data] copytool_in thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,630 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,695 | INFO     | [payload] validate_post thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,700 | INFO     | [data] control thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:07,953 | INFO     | [data] copytool_out thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:08,090 | INFO     | [payload] control thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:08,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:21:09] 2026-03-09 02:20:09,502 | INFO     | [job] queue monitor thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:10,672 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 03:21:09] 2026-03-09 02:20:35,297 | INFO     | PID=4158853 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 03:21:09] 2026-03-09 02:20:35,297 | INFO     | .. there are 48 such processes running
[2026-03-09 03:21:09] 2026-03-09 02:20:35,298 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 03:21:09] 2026-03-09 02:20:35,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 03:21:09] 2026-03-09 02:20:35,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 03:21:09] 2026-03-09 02:20:47,546 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-03-09 03:21:09] 2026-03-09 02:21:01,820 | INFO     | [monitor] cgroup control has ended
[2026-03-09 03:21:09] 2026-03-09 02:21:03,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22876089616192)>', '<ExcThread(monitor, started 22875850684160)>']
[2026-03-09 03:21:09] 2026-03-09 02:21:04,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 03:21:09] 2026-03-09 02:21:04,444 | INFO     | [monitor] control thread has ended
[2026-03-09 03:21:09] 2026-03-09 02:21:08,656 | INFO     | all workflow threads have been joined
[2026-03-09 03:21:09] 2026-03-09 02:21:08,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 03:21:09] 2026-03-09 02:21:08,656 | INFO     | traces error code: 0
[2026-03-09 03:21:09] 2026-03-09 02:21:08,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 03:21:09] 2026-03-09 02:21:08,792 [wrapper] ==== pilot stdout END ====
[2026-03-09 03:21:09] 2026-03-09 02:21:08,795 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 03:21:09] 2026-03-09 02:21:08,797 [wrapper] pilotpid: 4158853
[2026-03-09 03:21:09] 2026-03-09 02:21:08,802 [wrapper] Pilot exit status: 0
[2026-03-09 03:21:09] 2026-03-09 02:21:08,813 [wrapper] pandaids: 7044315133
[2026-03-09 03:21:09] 2026-03-09 02:21:08,947 [wrapper] cleanup supervisor_pilot  728536 4158854
[2026-03-09 03:21:09] 2026-03-09 02:21:08,950 [wrapper] Test setup, not cleaning
[2026-03-09 03:21:09] 2026-03-09 02:21:08,953 [wrapper] apfmon messages muted
[2026-03-09 03:21:09] 2026-03-09 02:21:08,956 [wrapper] ==== wrapper stdout END ====
[2026-03-09 03:21:09] 2026-03-09 02:21:08,959 [wrapper] ==== wrapper stderr END ====
[2026-03-09 03:21:09]  *** Error codes and diagnostics ***
[2026-03-09 03:21:09]     "exeErrorCode": 0,
[2026-03-09 03:21:09]     "exeErrorDiag": "",
[2026-03-09 03:21:09]     "pilotErrorCode": 0,
[2026-03-09 03:21:09]     "pilotErrorDiag": "",
[2026-03-09 03:21:09]  *** Listing of results directory ***
[2026-03-09 03:21:09] total 447864
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc    584627 Mar  7 02:09 pilot3.tar.gz
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc      5111 Mar  7 02:37 queuedata.json
[2026-03-09 03:21:09] -rwx------. 1 boinc boinc     36322 Mar  7 02:37 runpilot2-wrapper.sh
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc       100 Mar  9 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 03:21:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 01:50 run_atlas
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc       105 Mar  9 01:50 job.xml
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc      6708 Mar  9 01:50 init_data.xml
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc 268906596 Mar  9 01:50 EVNT.48958575._000071.pool.root.1
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc     15845 Mar  9 01:50 start_atlas.sh
[2026-03-09 03:21:09] drwxrwx--x. 2 boinc boinc      4096 Mar  9 01:50 shared
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc    597940 Mar  9 01:50 input.tar.gz
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc         0 Mar  9 01:50 boinc_lockfile
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc      2535 Mar  9 01:50 pandaJob.out
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc    999108 Mar  9 01:50 agis_schedconf.cvmfs.json
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc   1511578 Mar  9 01:50 agis_ddmendpoints.agis.ALL.json
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc       445 Mar  9 01:50 workernode_map.json
[2026-03-09 03:21:09] drwx------. 5 boinc boinc      4096 Mar  9 01:50 pilot3
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc 183699462 Mar  9 03:19 HITS.48958577._001820.pool.root.1
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc      1030 Mar  9 03:19 memory_monitor_summary.json
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc    259331 Mar  9 03:20 log.48958577._001820.job.log.tgz.1
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc       529 Mar  9 03:20 boinc_task_state.xml
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc      6346 Mar  9 03:20 heartbeat.json
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc        95 Mar  9 03:20 pilot_heartbeat.json
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc      8192 Mar  9 03:21 boinc_mmap_file
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc        27 Mar  9 03:21 wrapper_checkpoint.txt
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc      5016 Mar  9 03:21 pilotlog.txt
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc    775145 Mar  9 03:21 log.48958577._001820.job.log.1
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc       357 Mar  9 03:21 output.list
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc       620 Mar  9 03:21 runtime_log
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc   1054720 Mar  9 03:21 result.tar.gz
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc      9221 Mar  9 03:21 runtime_log.err
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc       663 Mar  9 03:21 pD1LDmKnvI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm92RLDmpTulon.diag
[2026-03-09 03:21:09] -rw-r--r--. 1 boinc boinc     21421 Mar  9 03:21 stderr.txt
[2026-03-09 03:21:09] HITS file was successfully produced:
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc 183699462 Mar  9 03:19 shared/HITS.pool.root.1
[2026-03-09 03:21:09]  *** Contents of shared directory: ***
[2026-03-09 03:21:09] total 443644
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc 268906596 Mar  9 01:50 ATLAS.root_0
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc     15845 Mar  9 01:50 start_atlas.sh
[2026-03-09 03:21:09] -rw-r--r--. 2 boinc boinc    597940 Mar  9 01:50 input.tar.gz
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc 183699462 Mar  9 03:19 HITS.pool.root.1
[2026-03-09 03:21:09] -rw-------. 1 boinc boinc   1054720 Mar  9 03:21 result.tar.gz
03:21:10 (4148219): run_atlas exited; CPU time 20603.932777
03:21:10 (4148219): called boinc_finish(0)

</stderr_txt>
]]>

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