Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:47:11 (843781): wrapper (7.7.26015): starting
18:47:11 (843781): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:47:11] Arguments: --nthreads 4
[2026-03-09 18:47:11] Threads: 4
[2026-03-09 18:47:11] Checking for CVMFS
[2026-03-09 18:47:11] No cvmfs_config command found, will try listing directly
[2026-03-09 18:47:11] CVMFS is ok
[2026-03-09 18:47:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:47:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:47:11] Further information can be found at the LHC@home message board.
[2026-03-09 18:47:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:47:11] Checking for apptainer binary...
[2026-03-09 18:47:11] which: no apptainer in ((null))
[2026-03-09 18:47:11] apptainer is not installed, using version from CVMFS
[2026-03-09 18:47:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:47:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-09 18:47:11] apptainer works
[2026-03-09 18:47:11] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:47:11] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:47:11] Starting ATLAS job with PandaID=7039032773
[2026-03-09 18:47:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:13:39]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:13:39]  filetype=log
[2026-03-09 20:13:39]  guid=232b0d03-dce1-455c-8e13-09e68706fab7
[2026-03-09 20:13:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 20:13:39]  is_altstaged=None
[2026-03-09 20:13:39]  is_tar=False
[2026-03-09 20:13:39]  lfn=log.48955010._009689.job.log.tgz.1
[2026-03-09 20:13:39]  mtime=0
[2026-03-09 20:13:39]  protocol_id=None
[2026-03-09 20:13:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 20:13:39]  replicas=None
[2026-03-09 20:13:39]  scope=mc23_13p6TeV
[2026-03-09 20:13:39]  status=None
[2026-03-09 20:13:39]  status_code=0
[2026-03-09 20:13:39]  storage_token=
[2026-03-09 20:13:39]  surl=/var/lib/boinc/var/slot64/slots/10/PanDA_Pilot-7039032773/log.48955010._009689.job.log.tgz.1
[2026-03-09 20:13:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/79/log.48955010._009689.job.log.tgz.1
[2026-03-09 20:13:39]  workdir=None
[2026-03-09 20:13:39] ]
[2026-03-09 20:13:39] 2026-03-09 19:12:27,165 | INFO     | transferring file log.48955010._009689.job.log.tgz.1 from /var/lib/boinc/var/slot64/slots/10/PanDA_Pilot-7039032773/log.48955010._009689.job.log.tgz.1 to /var/lib/
[2026-03-09 20:13:39] 2026-03-09 19:12:27,166 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot64/slots/10/PanDA_Pilot-7039032773/log.48955010._009689.job.log.tgz.1 /var/lib/boinc/var/slot64/slots/10/
[2026-03-09 20:13:39] 2026-03-09 19:12:27,187 | INFO     | adding to output.list: log.48955010._009689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/79/log.48955010._009689.job.log.tg
[2026-03-09 20:13:39] 2026-03-09 19:12:27,188 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 20:13:39] 2026-03-09 19:12:27,188 | INFO     | summary of transferred files:
[2026-03-09 20:13:39] 2026-03-09 19:12:27,188 | INFO     |  -- lfn=log.48955010._009689.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 20:13:39] 2026-03-09 19:12:27,188 | INFO     | stage-out finished correctly
[2026-03-09 20:13:39] 2026-03-09 19:12:27,783 | INFO     | time since job start (5104s) is within the limit (349056.0s)
[2026-03-09 20:13:39] 2026-03-09 19:12:29,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 20:13:39] 2026-03-09 19:12:29,570 | INFO     | monitor loop #368: job 0:7039032773 is in state 'finished'
[2026-03-09 20:13:39] 2026-03-09 19:12:29,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 20:13:39] 2026-03-09 19:12:29,788 | INFO     | time since job start (5106s) is within the limit (349056.0s)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,633 | INFO     | job 7039032773 has state=finished
[2026-03-09 20:13:39] 2026-03-09 19:12:30,634 | INFO     | preparing for final server update for job 7039032773 in state='finished'
[2026-03-09 20:13:39] 2026-03-09 19:12:30,634 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/10/PanDA_Pilot-7039032773/jobReport.json
[2026-03-09 20:13:39] 2026-03-09 19:12:30,635 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/10/workernode_map.json
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | INFO     | this job has now completed (state=finished)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | INFO     | log transfer has been attempted: DONE
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | INFO     | job 7039032773 has finished - writing final server update
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2957593/.job.ad'
[2026-03-09 20:13:39] 2026-03-09 19:12:30,636 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,654 | INFO     | using path: /var/lib/boinc/var/slot64/slots/10/PanDA_Pilot-7039032773/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,654 | INFO     | extracted standard info from prmon json
[2026-03-09 20:13:39] 2026-03-09 19:12:30,655 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:13:39] 2026-03-09 19:12:30,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:13:39] 2026-03-09 19:12:30,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:13:39] 2026-03-09 19:12:30,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | sum of square deviations: 141539398.0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | sum of deviations: 279470218.99999994
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | mean x: 1773081087.0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | mean y: 2323867.4935064935
[2026-03-09 20:13:39] 2026-03-09 19:12:30,656 | INFO     | intersect: -3498633227.778638
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | chi2: 0.0002900424240997842
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | current memory leak: 1.97 B/s (using 77 data points, chi2=0.00)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | could have reported an average CPU frequency of 3573 MHz (6 samples)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | ..............................
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . Timing measurements:
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . get job = 0 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . initial setup = 5 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . payload setup = 5 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . stage-in = 0 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . payload execution = 5083 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . stage-out = 0 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | . log creation = 0 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,657 | INFO     | ..............................
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | 
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | job summary report
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | --------------------------------------------------
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | PanDA job id: 7039032773
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | task id: 48955010
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | errors: (none)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | pilot state: finished 
[2026-03-09 20:13:39] 2026-03-09 19:12:30,705 | INFO     | transexitcode: 0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | exeerrorcode: 0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | exeerrordiag: 
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | exitcode: 0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | exitmsg: OK
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | cpuconsumptiontime: 19344 s
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | nevents: 400
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | neventsw: 0
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | pid: 863887
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | pgrp: 863887
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | corecount: 4
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | event service: False
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | sizes: {0: 2280191, 11: 2280191, 5091: 2306644, 5092: 2315666, 5094: 2315722, 5095: 2315916}
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | --------------------------------------------------
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | 
[2026-03-09 20:13:39] 2026-03-09 19:12:30,706 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/10
[2026-03-09 20:13:39] 2026-03-09 19:12:30,724 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:13:39] 2026-03-09 19:12:30,725 | INFO     | job 7039032773 has completed (purged errors)
[2026-03-09 20:13:39] 2026-03-09 19:12:30,726 | INFO     | overall cleanup function is called
[2026-03-09 20:13:39] 2026-03-09 19:12:31,732 | INFO     | --- collectZombieJob: --- 10, [863887]
[2026-03-09 20:13:39] 2026-03-09 19:12:31,732 | INFO     | zombie collector waiting for pid 863887
[2026-03-09 20:13:39] 2026-03-09 19:12:31,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:13:39] 2026-03-09 19:12:31,732 | INFO     | collected zombie processes
[2026-03-09 20:13:39] 2026-03-09 19:12:31,732 | INFO     | will attempt to kill all subprocesses of pid=863887
[2026-03-09 20:13:39] 2026-03-09 19:12:32,197 | INFO     | process IDs to be killed: [863887] (in reverse order)
[2026-03-09 20:13:39] 2026-03-09 19:12:32,444 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:13:39] 2026-03-09 19:12:32,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:13:39] 2026-03-09 19:12:32,471 | INFO     | did not find any defunct processes belonging to 863887
[2026-03-09 20:13:39] 2026-03-09 19:12:32,498 | INFO     | did not find any defunct processes belonging to 863887
[2026-03-09 20:13:39] 2026-03-09 19:12:32,498 | INFO     | ready for new job
[2026-03-09 20:13:39] 2026-03-09 19:12:32,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:13:39] 2026-03-09 19:12:32,500 | INFO     | **************************************
[2026-03-09 20:13:39] 2026-03-09 19:12:32,500 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:13:39] 2026-03-09 19:12:32,500 | INFO     | **************************************
[2026-03-09 20:13:39] 2026-03-09 19:12:32,500 | INFO     | 
[2026-03-09 20:13:39] 2026-03-09 19:12:32,506 | INFO     | architecture information:
[2026-03-09 20:13:39] 2026-03-09 19:12:32,508 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:13:39] 2026-03-09 19:12:32,522 | INFO     | cat /etc/os-release:
[2026-03-09 20:13:39] NAME="CentOS Linux"
[2026-03-09 20:13:39] VERSION="7 (Core)"
[2026-03-09 20:13:39] ID="centos"
[2026-03-09 20:13:39] ID_LIKE="rhel fedora"
[2026-03-09 20:13:39] VERSION_ID="7"
[2026-03-09 20:13:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:13:39] ANSI_COLOR="0;31"
[2026-03-09 20:13:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:13:39] HOME_URL="https://www.centos.org/"
[2026-03-09 20:13:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:13:39] 
[2026-03-09 20:13:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:13:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:13:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:13:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:13:39] 
[2026-03-09 20:13:39] 2026-03-09 19:12:32,522 | INFO     | **************************************
[2026-03-09 20:13:39] 2026-03-09 19:12:33,026 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/10
[2026-03-09 20:13:39] 2026-03-09 19:12:33,043 | INFO     | sufficient remaining disk space (25142755328 B)
[2026-03-09 20:13:39] 2026-03-09 19:12:33,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:13:39] 2026-03-09 19:12:33,043 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:13:39] 2026-03-09 19:12:33,043 | INFO     | update_server=False
[2026-03-09 20:13:39] 2026-03-09 19:12:33,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:13:39] 2026-03-09 19:12:33,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:13:39] 2026-03-09 19:12:33,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:13:39] 2026-03-09 19:12:33,080 | INFO     | aborting loop
[2026-03-09 20:13:39] 2026-03-09 19:12:33,101 | INFO     | all data control threads have been joined
[2026-03-09 20:13:39] 2026-03-09 19:12:34,048 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,067 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,082 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,085 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,106 | INFO     | [data] control thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,256 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,330 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:34,351 | INFO     | all payload control threads have been joined
[2026-03-09 20:13:39] 2026-03-09 19:12:34,553 | INFO     | all job control threads have been joined
[2026-03-09 20:13:39] 2026-03-09 19:12:35,051 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,102 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:13:39] 2026-03-09 19:12:35,356 | INFO     | [payload] control thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,451 | INFO     | [job] validate thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,558 | INFO     | [job] control thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,633 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:35,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:13:39] 2026-03-09 19:12:36,720 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:12:39,282 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:13:39] 2026-03-09 19:13:03,516 | INFO     | PID=852021 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:13:39] 2026-03-09 19:13:03,517 | INFO     | .. there are 60 such processes running
[2026-03-09 20:13:39] 2026-03-09 19:13:03,517 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:13:39] 2026-03-09 19:13:03,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:13:39] 2026-03-09 19:13:03,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:13:39] 2026-03-09 19:13:32,048 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:13:39] 2026-03-09 19:13:33,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23089178928960)>', '<ExcThread(monitor, started 23088865462016)>']
[2026-03-09 20:13:39] 2026-03-09 19:13:34,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:13:39] 2026-03-09 19:13:34,672 | INFO     | [monitor] control thread has ended
[2026-03-09 20:13:39] 2026-03-09 19:13:38,837 | INFO     | all workflow threads have been joined
[2026-03-09 20:13:39] 2026-03-09 19:13:38,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:13:39] 2026-03-09 19:13:38,837 | INFO     | traces error code: 0
[2026-03-09 20:13:39] 2026-03-09 19:13:38,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:13:39] 2026-03-09 19:13:38,962 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:13:39] 2026-03-09 19:13:38,965 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:13:39] 2026-03-09 19:13:38,969 [wrapper] pilotpid: 852021
[2026-03-09 20:13:39] 2026-03-09 19:13:38,972 [wrapper] Pilot exit status: 0
[2026-03-09 20:13:39] 2026-03-09 19:13:38,982 [wrapper] pandaids: 7039032773
[2026-03-09 20:13:39] 2026-03-09 19:13:39,101 [wrapper] cleanup supervisor_pilot 1645051 852022
[2026-03-09 20:13:39] 2026-03-09 19:13:39,104 [wrapper] Test setup, not cleaning
[2026-03-09 20:13:39] 2026-03-09 19:13:39,106 [wrapper] apfmon messages muted
[2026-03-09 20:13:39] 2026-03-09 19:13:39,108 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:13:39] 2026-03-09 19:13:39,110 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:13:39]  *** Error codes and diagnostics ***
[2026-03-09 20:13:39]     "exeErrorCode": 0,
[2026-03-09 20:13:39]     "exeErrorDiag": "",
[2026-03-09 20:13:39]     "pilotErrorCode": 0,
[2026-03-09 20:13:39]     "pilotErrorDiag": "",
[2026-03-09 20:13:39]  *** Listing of results directory ***
[2026-03-09 20:13:39] total 622292
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc    584627 Mar  7 10:08 pilot3.tar.gz
[2026-03-09 20:13:39] -rwx------. 1 boinc boinc     36322 Mar  7 10:09 runpilot2-wrapper.sh
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      5111 Mar  7 10:09 queuedata.json
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:13:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:47 run_atlas
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:47 job.xml
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      6708 Mar  9 18:47 init_data.xml
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc 441971904 Mar  9 18:47 EVNT.46701403._001194.pool.root.1
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:47 start_atlas.sh
[2026-03-09 20:13:39] drwxrwx--x. 2 boinc boinc      4096 Mar  9 18:47 shared
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc    597952 Mar  9 18:47 input.tar.gz
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:47 boinc_lockfile
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      2563 Mar  9 18:47 pandaJob.out
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc   1002716 Mar  9 18:47 agis_schedconf.cvmfs.json
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc   1511578 Mar  9 18:47 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc       443 Mar  9 18:47 workernode_map.json
[2026-03-09 20:13:39] drwx------. 5 boinc boinc      4096 Mar  9 18:47 pilot3
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc 189242494 Mar  9 20:12 HITS.48955010._009689.pool.root.1
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc       530 Mar  9 20:12 boinc_task_state.xml
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc      1043 Mar  9 20:12 memory_monitor_summary.json
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc    302410 Mar  9 20:12 log.48955010._009689.job.log.tgz.1
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc      6355 Mar  9 20:12 heartbeat.json
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc        95 Mar  9 20:13 pilot_heartbeat.json
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:13 boinc_mmap_file
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:13 wrapper_checkpoint.txt
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc      4829 Mar  9 20:13 pilotlog.txt
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc    743853 Mar  9 20:13 log.48955010._009689.job.log.1
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc       357 Mar  9 20:13 output.list
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:13 runtime_log
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc   1064960 Mar  9 20:13 result.tar.gz
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      9221 Mar  9 20:13 runtime_log.err
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc       662 Mar  9 20:13 fMcLDmCq2I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsKVLDmWBqxZm.diag
[2026-03-09 20:13:39] -rw-r--r--. 1 boinc boinc      8201 Mar  9 20:13 stderr.txt
[2026-03-09 20:13:39] HITS file was successfully produced:
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc 189242494 Mar  9 20:12 shared/HITS.pool.root.1
[2026-03-09 20:13:39]  *** Contents of shared directory: ***
[2026-03-09 20:13:39] total 618072
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc 441971904 Mar  9 18:47 ATLAS.root_0
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:47 start_atlas.sh
[2026-03-09 20:13:39] -rw-r--r--. 2 boinc boinc    597952 Mar  9 18:47 input.tar.gz
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc 189242494 Mar  9 20:12 HITS.pool.root.1
[2026-03-09 20:13:39] -rw-------. 1 boinc boinc   1064960 Mar  9 20:13 result.tar.gz
20:13:41 (843781): run_atlas exited; CPU time 19543.526967
20:13:41 (843781): called boinc_finish(0)

</stderr_txt>
]]>

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