Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:38:43 (1581541): wrapper (7.7.26015): starting
08:38:43 (1581541): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 08:38:43] Arguments: --nthreads 12
[2026-03-07 08:38:43] Threads: 12
[2026-03-07 08:38:43] Checking for CVMFS
[2026-03-07 08:38:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 08:38:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 08:38:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 08:38:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 08:38:44] 2.11.0.0 1450585 1 46248 156994 2 186 3257704 6144001 4854 130560 0 286030 99.994 2875 582 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-07 08:38:44] CVMFS is ok
[2026-03-07 08:38:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 08:38:44] Checking for apptainer binary...
[2026-03-07 08:38:44] apptainer is not installed, using version from CVMFS
[2026-03-07 08:38:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 08:38:44] radiat0r
[2026-03-07 08:38:44] apptainer works
[2026-03-07 08:38:44] Set ATHENA_PROC_NUMBER=12
[2026-03-07 08:38:44] Set ATHENA_CORE_NUMBER=12
[2026-03-07 08:38:44] Starting ATLAS job with PandaID=7039945108
[2026-03-07 08:38:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 11:33:22]  *** The last 200 lines of the pilot log: ***
[2026-03-07 11:33:22] 2026-03-07 11:32:15,183 | INFO     | intersect: -42785598835.72464
[2026-03-07 11:33:22] 2026-03-07 11:32:15,183 | INFO     | chi2: 1.2882384652200591
[2026-03-07 11:33:22] 2026-03-07 11:32:15,183 | INFO     | current chi2=1.2882384652200591 (change=-0.014765540313432208 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,183 | INFO     | right removable region: 164
[2026-03-07 11:33:22] 2026-03-07 11:32:15,184 | INFO     | sum of square deviations: 1392881930.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,185 | INFO     | sum of deviations: 7276730748.000001
[2026-03-07 11:33:22] 2026-03-07 11:32:15,185 | INFO     | mean x: 1772878071.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,185 | INFO     | mean y: 2709194.0727272728
[2026-03-07 11:33:22] 2026-03-07 11:32:15,185 | INFO     | intersect: -9259207479.439312
[2026-03-07 11:33:22] 2026-03-07 11:32:15,185 | INFO     | chi2: 0.008990381320343414
[2026-03-07 11:33:22] 2026-03-07 11:32:15,186 | INFO     | current chi2=0.008990381320343414 (change=99.30201519039524 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,186 | INFO     | sum of square deviations: 1270051720.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,187 | INFO     | sum of deviations: 4267578909.9999995
[2026-03-07 11:33:22] 2026-03-07 11:32:15,187 | INFO     | mean x: 1772878223.5
[2026-03-07 11:33:22] 2026-03-07 11:32:15,187 | INFO     | mean y: 2712918.8
[2026-03-07 11:33:22] 2026-03-07 11:32:15,187 | INFO     | intersect: -5954444256.347848
[2026-03-07 11:33:22] 2026-03-07 11:32:15,187 | INFO     | chi2: 0.0017307633030256874
[2026-03-07 11:33:22] 2026-03-07 11:32:15,188 | INFO     | current chi2=0.0017307633030256874 (change=80.74872198013091 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,188 | INFO     | sum of square deviations: 1154663510.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | sum of deviations: 2931077815.9999995
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | mean x: 1772878376.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | mean y: 2714680.522580645
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | intersect: -4497682563.657852
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | chi2: 0.0005018731415014509
[2026-03-07 11:33:22] 2026-03-07 11:32:15,189 | INFO     | current chi2=0.0005018731415014509 (change=71.00278584459898 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,190 | INFO     | sum of square deviations: 1046484737.5
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | sum of deviations: 2245711523.0000005
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | mean x: 1772878528.5
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | mean y: 2715644.96
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | intersect: -3801805909.5951467
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | chi2: 0.00025962305010555355
[2026-03-07 11:33:22] 2026-03-07 11:32:15,191 | INFO     | current chi2=0.00025962305010555355 (change=48.26918823971316 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,192 | INFO     | sum of square deviations: 945282840.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | sum of deviations: 2018868565.9999998
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | mean x: 1772878681.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | mean y: 2715985.1931034485
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | intersect: -3783673536.489572
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | chi2: 0.0002518884260332331
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | current chi2=0.0002518884260332331 (change=2.979174641533505 %)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,193 | INFO     | left removable region: 50
[2026-03-07 11:33:22] 2026-03-07 11:32:15,194 | INFO     | sum of square deviations: 459366752.5
[2026-03-07 11:33:22] 2026-03-07 11:32:15,194 | INFO     | sum of deviations: 958201664.0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,194 | INFO     | mean x: 1772879260.5
[2026-03-07 11:33:22] 2026-03-07 11:32:15,195 | INFO     | mean y: 2717075.649122807
[2026-03-07 11:33:22] 2026-03-07 11:32:15,195 | INFO     | intersect: -3695364790.8268137
[2026-03-07 11:33:22] 2026-03-07 11:32:15,195 | INFO     | chi2: 0.00010335962233342783
[2026-03-07 11:33:22] 2026-03-07 11:32:15,195 | INFO     | current memory leak: 2.09 B/s (using 114 data points, chi2=0.00)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | could have reported an average CPU frequency of 2020 MHz (9 samples)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | ..............................
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | . Timing measurements:
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | . get job = 0 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | . initial setup = 6 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | . payload setup = 6 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,196 | INFO     | . stage-in = 0 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,197 | INFO     | . payload execution = 10370 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,197 | INFO     | . stage-out = 0 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,197 | INFO     | . log creation = 0 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,197 | INFO     | ..............................
[2026-03-07 11:33:22] 2026-03-07 11:32:15,467 | INFO     | time since job start (10394s) is within the limit (349056.0s)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,783 | INFO     | 
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | job summary report
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | --------------------------------------------------
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | PanDA job id: 7039945108
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | task id: 48966848
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | errors: (none)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 11:33:22] 2026-03-07 11:32:15,787 | INFO     | pilot state: finished 
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | transexitcode: 0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | exeerrorcode: 0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | exeerrordiag: 
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | exitcode: 0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | exitmsg: OK
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | cpuconsumptiontime: 117578 s
[2026-03-07 11:33:22] 2026-03-07 11:32:15,788 | INFO     | nevents: 400
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | neventsw: 0
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | pid: 1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | pgrp: 1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | corecount: 12
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | event service: False
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | sizes: {0: 2295815, 11: 2295815, 10380: 2325142, 10381: 2334198, 10383: 2334400}
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | --------------------------------------------------
[2026-03-07 11:33:22] 2026-03-07 11:32:15,789 | INFO     | 
[2026-03-07 11:33:22] 2026-03-07 11:32:15,790 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-03-07 11:33:22] 2026-03-07 11:32:15,819 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 11:33:22] 2026-03-07 11:32:15,822 | INFO     | job 7039945108 has completed (purged errors)
[2026-03-07 11:33:22] 2026-03-07 11:32:15,823 | INFO     | overall cleanup function is called
[2026-03-07 11:33:22] 2026-03-07 11:32:15,910 | WARNING  | process 1655464 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 11:33:22] 2026-03-07 11:32:16,534 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:33:22] 2026-03-07 11:32:16,834 | INFO     | --- collectZombieJob: --- 10, [1655464]
[2026-03-07 11:33:22] 2026-03-07 11:32:16,834 | INFO     | zombie collector waiting for pid 1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:16,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 11:33:22] 2026-03-07 11:32:16,834 | INFO     | collected zombie processes
[2026-03-07 11:33:22] 2026-03-07 11:32:16,835 | INFO     | will attempt to kill all subprocesses of pid=1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:17,823 | INFO     | number of running child processes to parent process 1655464: 1
[2026-03-07 11:33:22] 2026-03-07 11:32:17,824 | INFO     | maximum number of monitored processes: 6
[2026-03-07 11:33:22] 2026-03-07 11:32:17,824 | INFO     | aborting job monitoring since job object (job id=7039945108) has expired
[2026-03-07 11:33:22] 2026-03-07 11:32:18,086 | INFO     | process IDs to be killed: [1655464] (in reverse order)
[2026-03-07 11:33:22] 2026-03-07 11:32:18,342 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 11:33:22] 2026-03-07 11:32:18,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 11:33:22] 2026-03-07 11:32:18,370 | INFO     | did not find any defunct processes belonging to 1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:18,394 | INFO     | did not find any defunct processes belonging to 1655464
[2026-03-07 11:33:22] 2026-03-07 11:32:18,394 | INFO     | ready for new job
[2026-03-07 11:33:22] 2026-03-07 11:32:18,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 11:33:22] 2026-03-07 11:32:18,397 | INFO     | **************************************
[2026-03-07 11:33:22] 2026-03-07 11:32:18,397 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 11:33:22] 2026-03-07 11:32:18,397 | INFO     | **************************************
[2026-03-07 11:33:22] 2026-03-07 11:32:18,397 | INFO     | 
[2026-03-07 11:33:22] 2026-03-07 11:32:18,435 | INFO     | architecture information:
[2026-03-07 11:33:22] 2026-03-07 11:32:18,436 | INFO     | executing command: cat /etc/os-release
[2026-03-07 11:33:22] 2026-03-07 11:32:18,456 | INFO     | cat /etc/os-release:
[2026-03-07 11:33:22] NAME="CentOS Linux"
[2026-03-07 11:33:22] VERSION="7 (Core)"
[2026-03-07 11:33:22] ID="centos"
[2026-03-07 11:33:22] ID_LIKE="rhel fedora"
[2026-03-07 11:33:22] VERSION_ID="7"
[2026-03-07 11:33:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 11:33:22] ANSI_COLOR="0;31"
[2026-03-07 11:33:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 11:33:22] HOME_URL="https://www.centos.org/"
[2026-03-07 11:33:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 11:33:22] 
[2026-03-07 11:33:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 11:33:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 11:33:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 11:33:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 11:33:22] 
[2026-03-07 11:33:22] 2026-03-07 11:32:18,456 | INFO     | **************************************
[2026-03-07 11:33:22] 2026-03-07 11:32:18,959 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-03-07 11:33:22] 2026-03-07 11:32:18,983 | INFO     | sufficient remaining disk space (1719859675136 B)
[2026-03-07 11:33:22] 2026-03-07 11:32:18,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 11:33:22] 2026-03-07 11:32:18,984 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 11:33:22] 2026-03-07 11:32:18,984 | INFO     | update_server=False
[2026-03-07 11:33:22] 2026-03-07 11:32:18,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 11:33:22] 2026-03-07 11:32:18,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:33:22] 2026-03-07 11:32:18,985 | INFO     | aborting loop
[2026-03-07 11:33:22] 2026-03-07 11:32:19,169 | INFO     | all data control threads have been joined
[2026-03-07 11:33:22] 2026-03-07 11:32:19,236 | INFO     | all payload control threads have been joined
[2026-03-07 11:33:22] 2026-03-07 11:32:19,428 | INFO     | all job control threads have been joined
[2026-03-07 11:33:22] 2026-03-07 11:32:19,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 11:33:22] 2026-03-07 11:32:19,986 | INFO     | [job] retrieve thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:19,990 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:19,990 | INFO     | [job] job monitor thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 11:33:22] 2026-03-07 11:32:20,098 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,112 | INFO     | [job] validate thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,174 | INFO     | [data] control thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,238 | INFO     | [payload] control thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:33:22] 2026-03-07 11:32:20,330 | INFO     | [payload] validate_post thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,433 | INFO     | [job] control thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:20,522 | INFO     | [data] copytool_in thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:21,294 | INFO     | [payload] failed_post thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:21,302 | INFO     | [job] queue monitor thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:21,406 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:21,492 | INFO     | [data] copytool_out thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:24,071 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:29,281 | INFO     | job.realtimelogging is not enabled
[2026-03-07 11:33:22] 2026-03-07 11:32:30,287 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 11:33:22] 2026-03-07 11:32:49,459 | INFO     | PID=1597598 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 11:33:22] 2026-03-07 11:32:49,459 | INFO     | .. there are 16 such processes running
[2026-03-07 11:33:22] 2026-03-07 11:32:49,460 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 11:33:22] 2026-03-07 11:32:49,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 11:33:22] 2026-03-07 11:32:49,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 11:33:22] 2026-03-07 11:33:16,797 | INFO     | [monitor] cgroup control has ended
[2026-03-07 11:33:22] 2026-03-07 11:33:17,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399428900672)>', '<ExcThread(monitor, started 140398722807552)>']
[2026-03-07 11:33:22] 2026-03-07 11:33:17,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 11:33:22] 2026-03-07 11:33:17,580 | INFO     | [monitor] control thread has ended
[2026-03-07 11:33:22] 2026-03-07 11:33:22,316 | INFO     | all workflow threads have been joined
[2026-03-07 11:33:22] 2026-03-07 11:33:22,317 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 11:33:22] 2026-03-07 11:33:22,317 | INFO     | traces error code: 0
[2026-03-07 11:33:22] 2026-03-07 11:33:22,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 11:33:22] 2026-03-07 11:33:22,457 [wrapper] ==== pilot stdout END ====
[2026-03-07 11:33:22] 2026-03-07 11:33:22,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 11:33:22] 2026-03-07 11:33:22,465 [wrapper] pilotpid: 1597598
[2026-03-07 11:33:22] 2026-03-07 11:33:22,469 [wrapper] Pilot exit status: 0
[2026-03-07 11:33:22] 2026-03-07 11:33:22,483 [wrapper] pandaids: 7039945108
[2026-03-07 11:33:22] 2026-03-07 11:33:22,660 [wrapper] cleanup supervisor_pilot 2237388 1597599
[2026-03-07 11:33:22] 2026-03-07 11:33:22,665 [wrapper] Test setup, not cleaning
[2026-03-07 11:33:22] 2026-03-07 11:33:22,669 [wrapper] apfmon messages muted
[2026-03-07 11:33:22] 2026-03-07 11:33:22,673 [wrapper] ==== wrapper stdout END ====
[2026-03-07 11:33:22] 2026-03-07 11:33:22,677 [wrapper] ==== wrapper stderr END ====
[2026-03-07 11:33:22]  *** Error codes and diagnostics ***
[2026-03-07 11:33:22]     "exeErrorCode": 0,
[2026-03-07 11:33:22]     "exeErrorDiag": "",
[2026-03-07 11:33:22]     "pilotErrorCode": 0,
[2026-03-07 11:33:22]     "pilotErrorDiag": "",
[2026-03-07 11:33:22]  *** Listing of results directory ***
[2026-03-07 11:33:22] total 564188
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc    584627 Mar  4 12:56 pilot3.tar.gz
[2026-03-07 11:33:22] -rwx------ 1 boinc boinc     36322 Mar  4 12:59 runpilot2-wrapper.sh
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc      5111 Mar  4 13:00 queuedata.json
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc       100 Mar  7 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 11:33:22] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 08:38 run_atlas
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc       105 Mar  7 08:38 job.xml
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc 256726773 Mar  7 08:38 EVNT.48293565._000003.pool.root.1
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc     15845 Mar  7 08:38 start_atlas.sh
[2026-03-07 11:33:22] drwxrwx--x 2 boinc boinc      4096 Mar  7 08:38 shared
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc    597954 Mar  7 08:38 input.tar.gz
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc      9415 Mar  7 08:38 init_data.xml
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc         0 Mar  7 08:38 boinc_setup_complete
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc         0 Mar  7 08:38 boinc_lockfile
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc      2570 Mar  7 08:38 pandaJob.out
[2026-03-07 11:33:22] -rw------- 1 boinc boinc    999161 Mar  7 08:38 agis_schedconf.cvmfs.json
[2026-03-07 11:33:22] -rw------- 1 boinc boinc   1521291 Mar  7 08:38 agis_ddmendpoints.agis.ALL.json
[2026-03-07 11:33:22] -rw------- 1 boinc boinc       418 Mar  7 08:39 workernode_map.json
[2026-03-07 11:33:22] drwx------ 5 boinc boinc      4096 Mar  7 08:39 pilot3
[2026-03-07 11:33:22] -rw------- 1 boinc boinc 313260884 Mar  7 11:31 HITS.48966848._000059.pool.root.1
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc       531 Mar  7 11:31 boinc_task_state.xml
[2026-03-07 11:33:22] -rw------- 1 boinc boinc      1033 Mar  7 11:32 memory_monitor_summary.json
[2026-03-07 11:33:22] -rw------- 1 boinc boinc    466217 Mar  7 11:32 log.48966848._000059.job.log.tgz.1
[2026-03-07 11:33:22] -rw------- 1 boinc boinc      6285 Mar  7 11:32 heartbeat.json
[2026-03-07 11:33:22] -rw------- 1 boinc boinc        95 Mar  7 11:32 pilot_heartbeat.json
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc      8192 Mar  7 11:33 boinc_mmap_file
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc        29 Mar  7 11:33 wrapper_checkpoint.txt
[2026-03-07 11:33:22] -rw------- 1 boinc boinc      4896 Mar  7 11:33 pilotlog.txt
[2026-03-07 11:33:22] -rw------- 1 boinc boinc   1434022 Mar  7 11:33 log.48966848._000059.job.log.1
[2026-03-07 11:33:22] -rw------- 1 boinc boinc       357 Mar  7 11:33 output.list
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc       620 Mar  7 11:33 runtime_log
[2026-03-07 11:33:22] -rw------- 1 boinc boinc   1914880 Mar  7 11:33 result.tar.gz
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc      8788 Mar  7 11:33 runtime_log.err
[2026-03-07 11:33:22] -rw------- 1 boinc boinc       648 Mar  7 11:33 7jUMDmF00H9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5WILDmk6JCCn.diag
[2026-03-07 11:33:22] -rw-r--r-- 1 boinc boinc     20818 Mar  7 11:33 stderr.txt
[2026-03-07 11:33:22] HITS file was successfully produced:
[2026-03-07 11:33:22] -rw------- 1 boinc boinc 313260884 Mar  7 11:31 shared/HITS.pool.root.1
[2026-03-07 11:33:22]  *** Contents of shared directory: ***
[2026-03-07 11:33:22] total 559112
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc 256726773 Mar  7 08:38 ATLAS.root_0
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc     15845 Mar  7 08:38 start_atlas.sh
[2026-03-07 11:33:22] -rw-r--r-- 2 boinc boinc    597954 Mar  7 08:38 input.tar.gz
[2026-03-07 11:33:22] -rw------- 1 boinc boinc 313260884 Mar  7 11:31 HITS.pool.root.1
[2026-03-07 11:33:22] -rw------- 1 boinc boinc   1914880 Mar  7 11:33 result.tar.gz
11:33:23 (1581541): run_atlas exited; CPU time 118358.682164
11:33:23 (1581541): called boinc_finish(0)

</stderr_txt>
]]>

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