Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:13:12 (530668): wrapper (7.7.26015): starting
08:13:12 (530668): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 08:13:12] Arguments: --nthreads 4
[2026-03-09 08:13:12] Threads: 4
[2026-03-09 08:13:12] Checking for CVMFS
[2026-03-09 08:13:12] No cvmfs_config command found, will try listing directly
[2026-03-09 08:13:12] CVMFS is ok
[2026-03-09 08:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 08:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 08:13:12] Further information can be found at the LHC@home message board.
[2026-03-09 08:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 08:13:12] Checking for apptainer binary...
[2026-03-09 08:13:12] which: no apptainer in ((null))
[2026-03-09 08:13:12] apptainer is not installed, using version from CVMFS
[2026-03-09 08:13:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 08:13:14] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-09 08:13:14] apptainer works
[2026-03-09 08:13:14] Set ATHENA_PROC_NUMBER=4
[2026-03-09 08:13:14] Set ATHENA_CORE_NUMBER=4
[2026-03-09 08:13:14] Starting ATLAS job with PandaID=7044431901
[2026-03-09 08:13:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 12:18:58]  *** The last 200 lines of the pilot log: ***
[2026-03-09 12:18:58] 2026-03-09 11:18:26,353 | INFO     | fitting pss+swap vs Time
[2026-03-09 12:18:58] 2026-03-09 11:18:26,353 | INFO     | sum of square deviations: 4286517580.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,355 | INFO     | sum of deviations: 13470585226.000002
[2026-03-09 12:18:58] 2026-03-09 11:18:26,355 | INFO     | mean x: 1773047786.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,355 | INFO     | mean y: 2315314.0416666665
[2026-03-09 12:18:58] 2026-03-09 11:18:26,355 | INFO     | intersect: -5569571624.963702
[2026-03-09 12:18:58] 2026-03-09 11:18:26,355 | INFO     | chi2: 1.9565721475663804
[2026-03-09 12:18:58] 2026-03-09 11:18:26,356 | INFO     | sum of square deviations: 4024149870.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,357 | INFO     | sum of deviations: 27605801259.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,358 | INFO     | mean x: 1773047634.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,358 | INFO     | mean y: 2323387.212765957
[2026-03-09 12:18:58] 2026-03-09 11:18:26,358 | INFO     | intersect: -12160842048.50799
[2026-03-09 12:18:58] 2026-03-09 11:18:26,358 | INFO     | chi2: 1.2104386164453012
[2026-03-09 12:18:58] 2026-03-09 11:18:26,358 | INFO     | current chi2=1.2104386164453012 (change=38.1347312977512 %)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,359 | INFO     | sum of square deviations: 3772712597.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,360 | INFO     | sum of deviations: 26891925884.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,360 | INFO     | mean x: 1773047481.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,360 | INFO     | mean y: 2322954.1739130435
[2026-03-09 12:18:58] 2026-03-09 11:18:26,360 | INFO     | intersect: -12635973822.767591
[2026-03-09 12:18:58] 2026-03-09 11:18:26,361 | INFO     | chi2: 1.2108955380488062
[2026-03-09 12:18:58] 2026-03-09 11:18:26,361 | INFO     | current chi2=1.2108955380488062 (change=-0.03774843245227266 %)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,361 | INFO     | right removable region: 229
[2026-03-09 12:18:58] 2026-03-09 11:18:26,361 | INFO     | sum of square deviations: 4024149870.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,363 | INFO     | sum of deviations: -15477772291.999998
[2026-03-09 12:18:58] 2026-03-09 11:18:26,363 | INFO     | mean x: 1773047939.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,363 | INFO     | mean y: 2331963.5319148935
[2026-03-09 12:18:58] 2026-03-09 11:18:26,363 | INFO     | intersect: 6821867306.195955
[2026-03-09 12:18:58] 2026-03-09 11:18:26,364 | INFO     | chi2: 0.7629746487203627
[2026-03-09 12:18:58] 2026-03-09 11:18:26,364 | INFO     | current chi2=0.7629746487203627 (change=61.004522645926244 %)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,364 | INFO     | sum of square deviations: 3772712597.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | sum of deviations: -15840837795.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | mean x: 1773048091.5
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | mean y: 2332178.4652173915
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | intersect: 7446993412.316956
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | chi2: 0.7620890045258747
[2026-03-09 12:18:58] 2026-03-09 11:18:26,366 | INFO     | current chi2=0.7620890045258747 (change=0.11607780100864097 %)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,367 | INFO     | left removable region: 20
[2026-03-09 12:18:58] 2026-03-09 11:18:26,367 | INFO     | sum of square deviations: 2830787960.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,368 | INFO     | sum of deviations: -1049097214.9999999
[2026-03-09 12:18:58] 2026-03-09 11:18:26,368 | INFO     | mean x: 1773048061.0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,368 | INFO     | mean y: 2340384.6028708136
[2026-03-09 12:18:58] 2026-03-09 11:18:26,369 | INFO     | intersect: 659436503.8248311
[2026-03-09 12:18:58] 2026-03-09 11:18:26,369 | INFO     | chi2: 0.0017955485129520063
[2026-03-09 12:18:58] 2026-03-09 11:18:26,369 | INFO     | current memory leak: -0.37 B/s (using 209 data points, chi2=0.00)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | could have reported an average CPU frequency of 2479 MHz (12 samples)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | ..............................
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . Timing measurements:
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . get job = 0 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . initial setup = 22 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . payload setup = 24 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . stage-in = 0 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . payload execution = 14611 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . stage-out = 1 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | . log creation = 0 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,370 | INFO     | ..............................
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | 
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | job summary report
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | --------------------------------------------------
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | PanDA job id: 7044431901
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | task id: 48966988
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | errors: (none)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | pilot state: finished 
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | transexitcode: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,464 | INFO     | exeerrorcode: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | exeerrordiag: 
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | exitcode: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | exitmsg: OK
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | cpuconsumptiontime: 54680 s
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | nevents: 400
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | neventsw: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | pid: 540364
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | pgrp: 540364
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | corecount: 4
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | event service: False
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | sizes: {0: 2279849, 1: 2280310, 14639: 2311117, 14640: 2311116, 14641: 2320248, 14642: 2320386}
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | --------------------------------------------------
[2026-03-09 12:18:58] 2026-03-09 11:18:26,465 | INFO     | 
[2026-03-09 12:18:58] 2026-03-09 11:18:26,466 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-03-09 12:18:58] 2026-03-09 11:18:26,487 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,487 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,487 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,487 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | job 7044431901 has completed (purged errors)
[2026-03-09 12:18:58] 2026-03-09 11:18:26,489 | INFO     | overall cleanup function is called
[2026-03-09 12:18:58] 2026-03-09 11:18:27,029 | WARNING  | process 540364 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 12:18:58] 2026-03-09 11:18:27,299 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 12:18:58] 2026-03-09 11:18:27,300 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7044431901/payload.stdout) since it has not been created yet
[2026-03-09 12:18:58] 2026-03-09 11:18:27,300 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-09 12:18:58] 2026-03-09 11:18:27,318 | INFO     | sufficient remaining disk space (20416823296 B)
[2026-03-09 12:18:58] 2026-03-09 11:18:27,318 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 12:18:58] 2026-03-09 11:18:27,318 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7044431901/HITS.48966988._012917.pool.root.1 since it does not exist
[2026-03-09 12:18:58] 2026-03-09 11:18:27,498 | INFO     | --- collectZombieJob: --- 10, [540364]
[2026-03-09 12:18:58] 2026-03-09 11:18:27,498 | INFO     | zombie collector waiting for pid 540364
[2026-03-09 12:18:58] 2026-03-09 11:18:27,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 12:18:58] 2026-03-09 11:18:27,498 | INFO     | collected zombie processes
[2026-03-09 12:18:58] 2026-03-09 11:18:27,498 | INFO     | will attempt to kill all subprocesses of pid=540364
[2026-03-09 12:18:58] 2026-03-09 11:18:27,985 | INFO     | number of running child processes to parent process 540364: 1
[2026-03-09 12:18:58] 2026-03-09 11:18:27,985 | INFO     | maximum number of monitored processes: 6
[2026-03-09 12:18:58] 2026-03-09 11:18:27,985 | INFO     | aborting job monitoring since job object (job id=7044431901) has expired
[2026-03-09 12:18:58] 2026-03-09 11:18:28,162 | INFO     | process IDs to be killed: [540364] (in reverse order)
[2026-03-09 12:18:58] 2026-03-09 11:18:28,291 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 12:18:58] 2026-03-09 11:18:28,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 12:18:58] 2026-03-09 11:18:28,304 | INFO     | did not find any defunct processes belonging to 540364
[2026-03-09 12:18:58] 2026-03-09 11:18:28,316 | INFO     | did not find any defunct processes belonging to 540364
[2026-03-09 12:18:58] 2026-03-09 11:18:28,316 | INFO     | ready for new job
[2026-03-09 12:18:58] 2026-03-09 11:18:28,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 12:18:58] 2026-03-09 11:18:28,318 | INFO     | **************************************
[2026-03-09 12:18:58] 2026-03-09 11:18:28,319 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 12:18:58] 2026-03-09 11:18:28,319 | INFO     | **************************************
[2026-03-09 12:18:58] 2026-03-09 11:18:28,319 | INFO     | 
[2026-03-09 12:18:58] 2026-03-09 11:18:28,323 | INFO     | architecture information:
[2026-03-09 12:18:58] 2026-03-09 11:18:28,323 | INFO     | executing command: cat /etc/os-release
[2026-03-09 12:18:58] 2026-03-09 11:18:28,337 | INFO     | cat /etc/os-release:
[2026-03-09 12:18:58] NAME="CentOS Linux"
[2026-03-09 12:18:58] VERSION="7 (Core)"
[2026-03-09 12:18:58] ID="centos"
[2026-03-09 12:18:58] ID_LIKE="rhel fedora"
[2026-03-09 12:18:58] VERSION_ID="7"
[2026-03-09 12:18:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 12:18:58] ANSI_COLOR="0;31"
[2026-03-09 12:18:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 12:18:58] HOME_URL="https://www.centos.org/"
[2026-03-09 12:18:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 12:18:58] 
[2026-03-09 12:18:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 12:18:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 12:18:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 12:18:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 12:18:58] 
[2026-03-09 12:18:58] 2026-03-09 11:18:28,338 | INFO     | **************************************
[2026-03-09 12:18:58] 2026-03-09 11:18:28,841 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-09 12:18:58] 2026-03-09 11:18:28,858 | INFO     | sufficient remaining disk space (20417871872 B)
[2026-03-09 12:18:58] 2026-03-09 11:18:28,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 12:18:58] 2026-03-09 11:18:28,859 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 12:18:58] 2026-03-09 11:18:28,859 | INFO     | update_server=False
[2026-03-09 12:18:58] 2026-03-09 11:18:28,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 12:18:58] 2026-03-09 11:18:28,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 12:18:58] 2026-03-09 11:18:28,860 | INFO     | will abort loop
[2026-03-09 12:18:58] 2026-03-09 11:18:29,135 | INFO     | all payload control threads have been joined
[2026-03-09 12:18:58] 2026-03-09 11:18:29,154 | INFO     | all data control threads have been joined
[2026-03-09 12:18:58] 2026-03-09 11:18:29,533 | INFO     | all job control threads have been joined
[2026-03-09 12:18:58] 2026-03-09 11:18:29,864 | INFO     | [job] retrieve thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:29,865 | INFO     | [job] job monitor thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,023 | INFO     | [payload] failed_post thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,108 | INFO     | [data] copytool_in thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,139 | INFO     | [payload] control thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,162 | INFO     | [data] control thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 12:18:58] 2026-03-09 11:18:30,508 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,538 | INFO     | [job] control thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,603 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,825 | INFO     | [job] validate thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:30,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 12:18:58] 2026-03-09 11:18:31,117 | INFO     | [payload] validate_post thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:31,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:31,336 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:31,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 12:18:58] 2026-03-09 11:18:32,355 | INFO     | [data] copytool_out thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:32,480 | INFO     | [job] queue monitor thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:34,945 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 12:18:58] 2026-03-09 11:18:47,019 | INFO     | [monitor] cgroup control has ended
[2026-03-09 12:18:58] 2026-03-09 11:18:48,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23232487245632)>', '<ExcThread(monitor, started 23232238577408)>']
[2026-03-09 12:18:58] 2026-03-09 11:18:53,048 | INFO     | all workflow threads have been joined
[2026-03-09 12:18:58] 2026-03-09 11:18:53,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 12:18:58] 2026-03-09 11:18:53,049 | INFO     | traces error code: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:53,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 12:18:58] 2026-03-09 11:18:58,304 | INFO     | PID=535047 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 12:18:58] 2026-03-09 11:18:58,304 | INFO     | .. there are 12 such processes running
[2026-03-09 12:18:58] 2026-03-09 11:18:58,305 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 12:18:58] 2026-03-09 11:18:58,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 12:18:58] 2026-03-09 11:18:58,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 12:18:58] 2026-03-09 11:18:58,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 12:18:58] 2026-03-09 11:18:58,305 | INFO     | [monitor] control thread has ended
[2026-03-09 12:18:58] 2026-03-09 11:18:58,439 [wrapper] ==== pilot stdout END ====
[2026-03-09 12:18:58] 2026-03-09 11:18:58,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 12:18:58] 2026-03-09 11:18:58,444 [wrapper] pilotpid: 535047
[2026-03-09 12:18:58] 2026-03-09 11:18:58,447 [wrapper] Pilot exit status: 0
[2026-03-09 12:18:58] 2026-03-09 11:18:58,456 [wrapper] pandaids: 7044431901
[2026-03-09 12:18:58] 2026-03-09 11:18:58,532 [wrapper] cleanup supervisor_pilot  833227 535048
[2026-03-09 12:18:58] 2026-03-09 11:18:58,538 [wrapper] Test setup, not cleaning
[2026-03-09 12:18:58] 2026-03-09 11:18:58,541 [wrapper] apfmon messages muted
[2026-03-09 12:18:58] 2026-03-09 11:18:58,543 [wrapper] ==== wrapper stdout END ====
[2026-03-09 12:18:58] 2026-03-09 11:18:58,546 [wrapper] ==== wrapper stderr END ====
[2026-03-09 12:18:58]  *** Error codes and diagnostics ***
[2026-03-09 12:18:58]     "exeErrorCode": 0,
[2026-03-09 12:18:58]     "exeErrorDiag": "",
[2026-03-09 12:18:58]     "pilotErrorCode": 0,
[2026-03-09 12:18:58]     "pilotErrorDiag": "",
[2026-03-09 12:18:58]  *** Listing of results directory ***
[2026-03-09 12:18:58] total 411160
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc      5111 Mar  7 05:06 queuedata.json
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc    584627 Mar  7 05:06 pilot3.tar.gz
[2026-03-09 12:18:58] -rwx------. 1 boinc boinc     36322 Mar  7 05:06 runpilot2-wrapper.sh
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc       100 Mar  9 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 12:18:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 08:13 run_atlas
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc       105 Mar  9 08:13 job.xml
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc      6560 Mar  9 08:13 init_data.xml
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc 211664429 Mar  9 08:13 EVNT.48966985._000511.pool.root.1
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc    597969 Mar  9 08:13 input.tar.gz
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc     15845 Mar  9 08:13 start_atlas.sh
[2026-03-09 12:18:58] drwxrwx--x. 2 boinc boinc      4096 Mar  9 08:13 shared
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc         0 Mar  9 08:13 boinc_lockfile
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc      2592 Mar  9 08:13 pandaJob.out
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc    999108 Mar  9 08:14 agis_schedconf.cvmfs.json
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc       452 Mar  9 08:14 workernode_map.json
[2026-03-09 12:18:58] drwx------. 5 boinc boinc      4096 Mar  9 08:14 pilot3
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc 200533881 Mar  9 12:17 HITS.48966988._012917.pool.root.1
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc       531 Mar  9 12:18 boinc_task_state.xml
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc      1033 Mar  9 12:18 memory_monitor_summary.json
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc   1511578 Mar  9 12:18 agis_ddmendpoints.agis.ALL.json
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc    403687 Mar  9 12:18 log.48966988._012917.job.log.tgz.1
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc      6403 Mar  9 12:18 heartbeat.json
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc      8192 Mar  9 12:18 boinc_mmap_file
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc        28 Mar  9 12:18 wrapper_checkpoint.txt
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc        95 Mar  9 12:18 pilot_heartbeat.json
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc       822 Mar  9 12:18 pilotlog.txt
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc   2051329 Mar  9 12:18 log.48966988._012917.job.log.1
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc       357 Mar  9 12:18 output.list
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc       620 Mar  9 12:18 runtime_log
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc   2467840 Mar  9 12:18 result.tar.gz
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc       665 Mar  9 12:18 yy9NDmt6xI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJLSLDmtw9Gfm.diag
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc      9205 Mar  9 12:18 runtime_log.err
[2026-03-09 12:18:58] -rw-r--r--. 1 boinc boinc     21125 Mar  9 12:18 stderr.txt
[2026-03-09 12:18:58] HITS file was successfully produced:
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc 200533881 Mar  9 12:17 shared/HITS.pool.root.1
[2026-03-09 12:18:58]  *** Contents of shared directory: ***
[2026-03-09 12:18:58] total 405560
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc 211664429 Mar  9 08:13 ATLAS.root_0
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc    597969 Mar  9 08:13 input.tar.gz
[2026-03-09 12:18:58] -rw-r--r--. 2 boinc boinc     15845 Mar  9 08:13 start_atlas.sh
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc 200533881 Mar  9 12:17 HITS.pool.root.1
[2026-03-09 12:18:58] -rw-------. 1 boinc boinc   2467840 Mar  9 12:18 result.tar.gz
12:19:00 (530668): run_atlas exited; CPU time 55277.485916
12:19:00 (530668): called boinc_finish(0)

</stderr_txt>
]]>

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